KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:42 2014 Check: 00 .. Name: ENSP00000351040/1-383 Len: 401 Check: 4447 Weight: 1.00 Name: ENSBTAP00000055507/1-380 Len: 401 Check: 4405 Weight: 1.00 Name: ENSTTRP00000010754/1-383 Len: 401 Check: 8268 Weight: 1.00 Name: bmy_10629T0/1-383 Len: 401 Check: 7648 Weight: 1.00 Name: BACU011273/1-398 Len: 401 Check: 5643 Weight: 1.00 // 1 50 ENSP00000351040/1-383 MNAGPSWNKV QHSKNSSGKR QSKSQVPHAS SQPRSSLT-A VTQPTEEKLK ENSBTAP00000055507/1-380 MNAGPSRTKV QHPKNSR-KR QSKPQVPHIS SQLKSSLRGG VPQPTEDKLK ENSTTRP00000010754/1-383 MNAGPSWNKV QRPKNSR-KR QSKSQVPHLS SQPKSSLGGC VPQPTEDKLK bmy_10629T0/1-383 MNAGPSWNKV QRPKNSR-KR QNKSQVPYVS SQLKSSLGGC VPQPTEDKLK BACU011273/1-398 MNAGPSWNKV QRPKNSR-KR QSKSQVPYVS SQLKSSLGGC VPQPTEDKLK 51 100 ENSP00000351040/1-383 ESISPEARRK RNPLGSRCQG ASGNKLFLDF QSMKIIKE-N ADEDSASDLS ENSBTAP00000055507/1-380 ESISPEGNPE RSPLGPRYHG LSGNKLFLDF ESMKIIKEDD EEEDSASDLS ENSTTRP00000010754/1-383 ESISPEGNPK RSPLGYRCRG SSGNKLFLDF QTMKIIKE-D AEEDSASDLS bmy_10629T0/1-383 ESISPEGNPK RSPLGYRCRG SSGNKLFLDF QTMKIVKE-D AEEDSASDLS BACU011273/1-398 ESISPEGNPK RSPLGYRCRG SSGNKLFLDF QTMKIVKE-D AEEDSASDLS 101 150 ENSP00000351040/1-383 DSERIPIPPS PLTPPDLNLR AEEIDPVYFD LHPGQGHT-K PEYYYPNFLP ENSBTAP00000055507/1-380 DSERIAIPPS PLTPPDLHLR AEEIDPVHFD LHPGQGPT-W PEYCYPDFLP ENSTTRP00000010754/1-383 DSERIPVPPS PLTPPDLHLR AEEIDAAHFD LHPGQGPTQQ PEYSYPDFLP bmy_10629T0/1-383 DSERIPVPPS PLTPPDLHLR AEEIDAVHFD LHPGQGST-Q PEYCYPDFLP BACU011273/1-398 DSERIPVPPS PLTPPDLHLR AEEIDVVHFD LHPGQGPT-Q PEYCYPDFLP 151 200 ENSP00000351040/1-383 SPFSSWDLRD MALLLNAENK TEAVPRVGGL LGKYIDRLIQ LEWLQVQTVQ ENSBTAP00000055507/1-380 PPCNSWDLRD MAMLLHSERR TEAVPKTGGL LGKYIDRLVQ LEWLQIQTIQ ENSTTRP00000010754/1-383 APCNSWDLRD MAVLLHSERR TEAVPRTGGL LGKYIDRLVQ LEWLQIQTVQ bmy_10629T0/1-383 APCNSWDLRD MAVLLHSERR TEAVPRTAGL LGKYVDRLVQ LEWLQIQTVQ BACU011273/1-398 APCNSWDLRD MAVLLHSERR TEAVPRAAGP LGKYVDRLVQ LEWLQIQTVQ 201 250 ENSP00000351040/1-383 CEKAKGGKAR PPTAPGTSGA LKSPGRSKLI ASALSKPLPH ---------- ENSBTAP00000055507/1-380 CEKGKVAKGR PPT--GTSGA LKSPGRSKLM PSALSRPH-- ---------- ENSTTRP00000010754/1-383 CEKAKGAKAR PPTAPGTSGA LKSPGRSKLI ANALSRPQ-- ---------- bmy_10629T0/1-383 CEKGKGAKAR PPTAPGTSGA LKSPGRSKLI ASALSRPQ-- ---------- BACU011273/1-398 CEKGKGAKAR PPTAPGTSGA LKSPGRSKLI SSALSTPQQX XXXXXXXXXX 251 300 ENSP00000351040/1-383 ---QEGASKS GPSRKKAFHH EEIHPSHYAF ETSPRPIDVL GGTRFCSQRQ ENSBTAP00000055507/1-380 ---QEGPLKS GPSRKKDMLC KEVHPFCYTG EASPRPLDVL SSSRLCSQKQ ENSTTRP00000010754/1-383 ---QEGPPKS GPSRKKDVHR KEVHPSYYTC EASTKPLDVL NSSRLCSQKQ bmy_10629T0/1-383 ---QEGPPKS GPSRKKDVHR EDVHPSYYTC EASTKPLDVL SSSRLCSQKQ BACU011273/1-398 XXXQEGPPKS GPSRKKDVHR EDVHPSYYTC EASTKPLDVL SSSRLCSQKQ 301 350 ENSP00000351040/1-383 TLEMRTEEKK KKSSKSTKLQ RWDLS-GSGS SSKVETSGHI RVPKQAAVIL ENSBTAP00000055507/1-380 TPEVQTEKKK KKSNKSPRLQ PWDLSCGDGG -PKIESNGNL RAPRPPAMIL ENSTTRP00000010754/1-383 TLDVQTEEKK KKSNKSSKLQ RWDLSCGDSG DPKIKSSVNL RLPRQPAVIG bmy_10629T0/1-383 TLDVQTEEKR KKSNKSSKLQ HWHLSCGDGG DPKIESSLNL RFPRQPAVIG BACU011273/1-398 TLDVQTEEKK KKSNKSSKLQ HWHLSCGDGG DPNMESSVNL HFPRQPAVIG 351 400 ENSP00000351040/1-383 DSADSCKASK TQAHAHPRKK GKAESCGHAT VSSEKKLKTN GVKQNTYKLK ENSBTAP00000055507/1-380 DPTDGCRAAR APAHTGLKKK GNVSHCAHAT ISSEKKLKTN GGKQNTYKFK ENSTTRP00000010754/1-383 DSTDTYKASR APAHASLKQK GNANNCARAT VSSEKKLKTN GVKQNTHKFK bmy_10629T0/1-383 DSTDTYKASR APAHASLKKK GNANNCARAT ISSEKKLKTN GVKPNTHKFK BACU011273/1-398 DSTDTYKASR APAHATLKKK GNANNCARAT ISSEKKLKTN GVKPNTHKFK 401 450 ENSP00000351040/1-383 - ENSBTAP00000055507/1-380 - ENSTTRP00000010754/1-383 - bmy_10629T0/1-383 S BACU011273/1-398 S