KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:43 2014 Check: 00 .. Name: ENSP00000313869/1-440 Len: 498 Check: 6325 Weight: 1.00 Name: ENSBTAP00000055527/1-421 Len: 498 Check: 2704 Weight: 1.00 Name: bmy_01654T0/1-491 Len: 498 Check: 7347 Weight: 1.00 Name: BACU019116/1-431 Len: 498 Check: 5598 Weight: 1.00 Name: ENSTTRP00000005775/1-441 Len: 498 Check: 8287 Weight: 1.00 // 1 50 ENSP00000313869/1-440 ---------- ---------- ---------- ---MGLGVSA EQPAGGAEGF ENSBTAP00000055527/1-421 ---------- ---------- ---------- ---------- ---------- bmy_01654T0/1-491 HPRDKARVVE SREGEYALVV PRSRAPAPEP TVAMGLGASA EQPAGGAEGF BACU019116/1-431 ---------- ---------- ---------- ---------- --------GL ENSTTRP00000005775/1-441 ---------- ---------- ---------- ---MGLGASA EQPAGGAEGX 51 100 ENSP00000313869/1-440 HLHGVQENSP AQQAGLEPYF DFIITIGHSR L--------- ----NKENDT ENSBTAP00000055527/1-421 ----VQENSP AQQAGLEPYF DFIITIGHSR L--------- ----NKENDT bmy_01654T0/1-491 HLHGWLQAQP SHQ-GPCPIS DPDLSGGPGR VCVGVRESAP LPLQNKENDT BACU019116/1-431 CAPQVQENSP AQQAGLEPYF DFIITIGHSR L--------- ----NKENDM ENSTTRP00000005775/1-441 XXXXVQENSP AQQAGLEPYF DFIITIGHSR L--------- ----NKENDT 101 150 ENSP00000313869/1-440 LKALLKANVE KPVKLEVFNM KTMRVREVEV VPSNMWGGQG LLGASVRFCS ENSBTAP00000055527/1-421 LKALLKANVE KPVKLEVFNM KTMKVREVEV VPSNMWGGQG LLGASVRFCS bmy_01654T0/1-491 LKALLKANVE KPVKLEVFNM KTMKVREVEV VPSNMWGGQG LLGASVRFCS BACU019116/1-431 LKALLKANVE KPVKLEVFNM KTMKVREVEV VPSNMWGGQG LLGASVRFCS ENSTTRP00000005775/1-441 LKALLKANVE KPVKLEVFSM KTNKVREVEV VPSNMWGGQG LLGASVRFCS 151 200 ENSP00000313869/1-440 FRRASEQVWH VLDVEPSSPA ALAGLRPYTD YVVGSDQILQ ESEDFFTLIE ENSBTAP00000055527/1-421 FRRASEHVWH VLDVEPSSPA ALAGLRPYTD YVVGSDQILQ ESEDFFSLIE bmy_01654T0/1-491 FRRASEHVWH VLDVEPCSPA FLAGLRPYTD YVVGSDQILQ ESEDFFSLIE BACU019116/1-431 FRRASEHVWH VLDVEPCSPA FLAGLRPYTD YVVGSDQILQ ESEDFFSLIE ENSTTRP00000005775/1-441 FRRASEHVWH VLDVEPCSPA SLAGLRPYTD YVVGSDQILQ ESEDFFSLIE 201 250 ENSP00000313869/1-440 SHEGKPLKLM VYNSKSDSCR EVTVTPNAAW GGEGSLGCGI GYGYLHRIPT ENSBTAP00000055527/1-421 SHEGKALKLM VYNSESDSCR EVTVTPNAAW GGEGSLGCGI GYGYLHRIPT bmy_01654T0/1-491 SHEGKPLKLM VYNSESDSCR EVTVTPNAAW GGEGSLGCGI GYGYLHRIPT BACU019116/1-431 SHEGKPLKLM VYNSESDSCR DVTVTPNAAW GGEGSLGCGI GYGYLHRIPT ENSTTRP00000005775/1-441 SHEGKPLKLM IYNSESDSCR EVTVTPNAAW GGEGSLGCGI GYGYLHRIPT 251 300 ENSP00000313869/1-440 QPPSYHKKPP GTPPPSALPL GAPPPDA--- --LPPGPTPE DSPS---LET ENSBTAP00000055527/1-421 QPPSHHKKPP GGPPPSAPPP GAPP------ ----PGPGSQ DSPAPFGLET bmy_01654T0/1-491 QPPSHHKKPP GVPPPGVPPP GVPPPGAPPS GTPPPGPTPQ DSPAPSGLET BACU019116/1-431 QPPSHHKKPP GVPPPGVPPP GVPPPGAPPS GTPPPGPTPQ DSPAPSGLEI ENSTTRP00000005775/1-441 QPPSHHKKPS GVPPPGVPPP GIPPPGA--- --PPPGPTPQ DSPAPSGLET 301 350 ENSP00000313869/1-440 GSRQSDYMEA LLQAPGSSME DPLPGPGSPS HSAPDPDGLP HFMETPLQPP ENSBTAP00000055527/1-421 GSKQGEYVEA LLQAPDSSTE EQPPGPESLT QGAQDLGDPP RSMEIPLQPP bmy_01654T0/1-491 GSRQGDYVEA LLQAPGSSKE EQLPGPESPG HGTPDLGDLP RSMEIPLQPP BACU019116/1-431 GSRQGDYVEA LLQAPGSSKE EQLPGPESPG HGTPDLGDLP RSMEIPLQPP ENSTTRP00000005775/1-441 GSRQGDYVEA LLQAPGSSKE EQLPGPKSPG HGTPDLGDLP RSMEIPLQPP 351 400 ENSP00000313869/1-440 PPVQRVMDPG FLDVSGISLL DNSNASVWPS LPSSTELTTT AVSTSGPEDI ENSBTAP00000055527/1-421 PPLQRVMDPG FLDVSGLSLL DSSNTSVWPG LPSSTELTPP VASASGLEDV bmy_01654T0/1-491 PPLQRVMDPG FLDVSGISLL DSSNTSAWSG LPSSTELTST VVSASGPEDV BACU019116/1-431 PPLQRVMDPG FLDVSGISLL DSSNASAWSG LPSSTELTST AVSASGPEDV ENSTTRP00000005775/1-441 PPLQRVMDPG FLDVSGISLM DSSNASAWSG LPSSTELTST AVSASGPEDV 401 450 ENSP00000313869/1-440 CSSSSSHERG GEATWSGSEF EVSFLDSPGA QAQADHLPQL TLPDSLTSAA ENSBTAP00000055527/1-421 CSSSGSHERG GEATWSGSEF EVSFPDSPGA QAQPDHLPQL TLPDSLTFVA bmy_01654T0/1-491 CSSRGSRERG GEATWSGSEF EVSFPDSPGA QA--DHLPQL TLPDSLTSAA BACU019116/1-431 CSSRGSRERG GEATWSGSEF EVSFPDSPGA QA--DHLPQL TLPDSLTSAA ENSTTRP00000005775/1-441 CSSRGSRERG GEATWSGSEF EVSFPDSPGA QA--DHLPQL TLPDSLTSAA 451 500 ENSP00000313869/1-440 SPEDGLSAEL LEAQAEEEPA STEGLDTGTE AEGLDSQAQI STTE---- ENSBTAP00000055527/1-421 SPEDGLSAEL LEAQADEEPA SPESPDCGME AGGAPGQARL STPDHSGL bmy_01654T0/1-491 SPEDGLSAEL LEAQAEEEPA STERLDFGAE AEGAASQAQL STSK---- BACU019116/1-431 SPEDGLSAEL LEAQAEEEPA STESLDFGAE AERPASQAQL STPK---- ENSTTRP00000005775/1-441 SPEDGLSAEL LEAQAEEESA STESPDFRAQ AEGAASQAQL SPPE----