KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:53 2014 Check: 00 .. Name: bmy_06451T0/1-351 Len: 437 Check: 683 Weight: 1.00 Name: ENSP00000377547/1-435 Len: 437 Check: 4463 Weight: 1.00 Name: BACU019980/1-240 Len: 437 Check: 6343 Weight: 1.00 Name: ENSBTAP00000055655/1-366 Len: 437 Check: 2982 Weight: 1.00 Name: ENSTTRP00000011989/1-232 Len: 437 Check: 8367 Weight: 1.00 // 1 50 bmy_06451T0/1-351 ---------- ---------- ---------- MSLSLSEPER L--------- ENSP00000377547/1-435 MMDEPWWEGR VASDVHCTLR EKELKLPTFR AHSPLLKSRR FFVDILTLLS BACU019980/1-240 ---------- ---------- --ELKLPTFR AHSPLLKSRR FFVDILTLLS ENSBTAP00000055655/1-366 ---------- ---------- FQELKLPTFR AHSPLLKSRR FFVDILTLLS ENSTTRP00000011989/1-232 ---------- ---------- --ELKLPTFR AHSPLLKSRR FFVDILTLLS 51 100 bmy_06451T0/1-351 ---------- ---------- -----LRTGS EALAVEHRCV LGAQLGRPLP ENSP00000377547/1-435 SHCQLCPAAR HLAVYLLDHF MDRYNVTTSK QLYTVAVSCL LLANGVSLLS BACU019980/1-240 SHCQLCPAAR HLAVYLLDHF LDRYNITTSK QLYAVAVSCL LLASTWNPLP ENSBTAP00000055655/1-366 SHCQLCPAAR HLAVYLLDHF LDRYDITTSK QLYAVAVSCL LLAS------ ENSTTRP00000011989/1-232 SHCQLCPAAR HLAVYLLDHF LDRYNITTSK QLYAVAVSCL LLAS------ 101 150 bmy_06451T0/1-351 LPTPAPAAVL HPVRLGFGGQ ---------- ---------- -GKFEDREDH ENSP00000377547/1-435 PRLKCSGMIS AHCNLHLPGS SNSPASAPHP PPTPPQVAET TGKFEDREDH BACU019980/1-240 SPCRFLPL-- ---------- ---------- ---------- -GKFEDREDH ENSBTAP00000055655/1-366 ---------- ---------- ---------- ---------- --KFEDREDH ENSTTRP00000011989/1-232 ---SCCSMI- ---------- ---------- ---------- -SKFEDREDH 151 200 bmy_06451T0/1-351 VPKLEQINST RILSSQNFSL TKKELLSTEL LLLEAFGWNL CLPTPAHFLD ENSP00000377547/1-435 VPKLEQINST RILSSQNFTL TKKELLSTEL LLLEAFSWNL CLPTPAHFLD BACU019980/1-240 VPKLEQINST RILSSQNFSL TKKELLSTEL LLLEAFSWNL CLPTPAHFLD ENSBTAP00000055655/1-366 VPKLEQINST RILSSQNFSL TRKELLSTEL LLLEAFGWNL CLPTPAHFLD ENSTTRP00000011989/1-232 VPKLEQINST RILSSQNFSL TKKELLSTEL LLLEAFGWNL CLPTPAHFLD 201 250 bmy_06451T0/1-351 YYLLASVSQK DHHCHSWPTT CPRKTKECLK EYAHYFLEVT LQDHIFYKFQ ENSP00000377547/1-435 YYLLASVSQK DHHCHTWPTT CPRKTKECLK EYAHYFLEVT LQDHIFYKFQ BACU019980/1-240 YYLLASVSQK DHHCHSWPTT CPRKTKECLK EYAHYFLEVT LQDHIFYKFQ ENSBTAP00000055655/1-366 YYLLASVSQK DHHCHSWPTT CPRKTKECLK EYAHYFLEVT LQDHIFYKFQ ENSTTRP00000011989/1-232 YYLLASVSQK DHHCHSWPTT CPRKTKECLK EYAHYFLEVT LQDHIFYKFQ 251 300 bmy_06451T0/1-351 PSVVAAACVG ASRICLQLSP YWTRDLQRIS NYSLEHLSTC IEILLVAYDN ENSP00000377547/1-435 PSVVAAACVG ASRICLQLSP YWTRDLQRIS SYSLEHLSTC IEILLVVYDN BACU019980/1-240 PSVVAAACVG ASRICLQLSP YWTRDLQRIS NYSLEHLSTC IEILL----- ENSBTAP00000055655/1-366 PSVVAAACVG ASRICLQLSP YWTRDLQRIS NYSLEHLSTC IEILLVAYDN ENSTTRP00000011989/1-232 PSVVAAACVG ASRICLQLSP YWTRDLQRIS NYSLEHLSTC IEILL----- 301 350 bmy_06451T0/1-351 ILKDAVAVKS QALAMVPGTP PAPTQVLFQP PTYPGLGQPT AMALAQFQTP ENSP00000377547/1-435 VLKDAVAVKS QALAMVPGTP PTPTQVLFQP PAYPALGQP- ATTLAQFQTP BACU019980/1-240 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055655/1-366 VLKDAVAVKS QALAMVPGS- --PTQVLFQP PAYPGLSQPS ATALAQFQNP ENSTTRP00000011989/1-232 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_06451T0/1-351 VQDLCVAYRD SLQAHH-SGT LLSGGSGSSL HALYPTLQPL DVCPVPLPAS ENSP00000377547/1-435 VQDLCLAYRD SLQAHR-SGS LLSGSTGSSL HTPYQPLQPL DMCPVPVPAS BACU019980/1-240 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055655/1-366 VQDLCLAYRD SLQAHHRSGT LLSGGTNSSL HALYPTLQPL DVCPVPLPAS ENSTTRP00000011989/1-232 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_06451T0/1-351 LSMHMAIAAE PRHCLAATYG SSYFSGSHAF PAGCFDR ENSP00000377547/1-435 LSMHMAIAAE PRHCLATTYG SSYFSGSHMF PTGCFDR BACU019980/1-240 ---------- ---------- ---------- ------- ENSBTAP00000055655/1-366 FSMQMAIATE PRHCLAATYG SSYFSGGHAF PAGCFDR ENSTTRP00000011989/1-232 ---------- ---------- ---------- -------