KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:54 2014 Check: 00 .. Name: bmy_05321T0/1-487 Len: 747 Check: 2226 Weight: 1.00 Name: ENSBTAP00000055660/1-437 Len: 747 Check: 4970 Weight: 1.00 Name: ENSTTRP00000009478/1-433 Len: 747 Check: 4819 Weight: 1.00 Name: BACU018140/1-746 Len: 747 Check: 7163 Weight: 1.00 // 1 50 bmy_05321T0/1-487 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055660/1-437 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009478/1-433 ---------- ---------- ---------- ---------- ---------- BACU018140/1-746 KFIREVTPYI KKPSLVSDLP WEGAAPQSPS FSGSEDSGSP KHQNSTKDRK 51 100 bmy_05321T0/1-487 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055660/1-437 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009478/1-433 ---------- ---------- ---------- ---------- ---------- BACU018140/1-746 VIPLKMCFAA RNLSMPDLEN RLIELHSPDS RNTLILRCKD TATAHSWFVA 101 150 bmy_05321T0/1-487 ---------- ------ALGL GSPASGHPTR AQRRPAGLPA PDQLLGSRGR ENSBTAP00000055660/1-437 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009478/1-433 ---------- ---------- ---------- ---------- ---------- BACU018140/1-746 IHTNIMALLP QVLAELNAML GATSTAGGSK EVKHIAWLAE QAKLDGGRQQ 151 200 bmy_05321T0/1-487 ---------- ---------- ---------- -------TEA ASSAAGC--- ENSBTAP00000055660/1-437 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009478/1-433 ---------- ---------- ---------- ---------- ---------- BACU018140/1-746 WRPVLMAVTE KDLLLYDCMP WTRDAWASPC HSYPLVATRL VHSGSGCRSP 201 250 bmy_05321T0/1-487 ---------- --GADPGDEM TT-------- ---------- ---------- ENSBTAP00000055660/1-437 ---------- ---------- -L-------- ---------- ---------- ENSTTRP00000009478/1-433 ---------- ---------- VT-------- ---------- ---------- BACU018140/1-746 SLGSDLTFAT RTGSRQGIEM HLFRVETHRD LSTWTRILVQ GCHAAAELIK 251 300 bmy_05321T0/1-487 -----STL-- Q--------- ---------- ---------- ---------- ENSBTAP00000055660/1-437 -----CVLPF Q--------- ---------- ---------- ---------- ENSTTRP00000009478/1-433 -----VVL-- ---------- ---------- ---------- ---------- BACU018140/1-746 EVSLGCTLNG QEVRLTVHYE SGFTISRENG GSSSILYRYP FERLKMSADD 301 350 bmy_05321T0/1-487 ---------- ------KAID LVTKATEEDK AKNYEEALRL YQHAVEYFLH ENSBTAP00000055660/1-437 ---------- ------KAID LVTKATEEDK AKNYEEALRL YQHAVEYFLH ENSTTRP00000009478/1-433 ---------- ------KAID LVTKATEEDK AKNYEEALRL YQHAVEYFLH BACU018140/1-746 GIRNLYLDFG GPEGELKAID LVTKATEEDK AKNYEEALRL YQHAVEYFLH 351 400 bmy_05321T0/1-487 AIKYEAHSDK AKESIRAKCM QYLDRAEKLK DYLRNKEKHG KKPVKENQSE ENSBTAP00000055660/1-437 AIKYEAHSDK AKESIRAKCM QYLDRAEKLK DYLRNKEKHG KKPVKENQSE ENSTTRP00000009478/1-433 AIKYEAHSDK AKESIRAKCM QYLDRAEKLK DYLRNKEKHG KKPVKENQSE BACU018140/1-746 AIKYEAHSDK AKESIRAKCM QYLDRAEKLK DYLRNKEKHG KKPVKENQSE 401 450 bmy_05321T0/1-487 SKGSDSDSEG DNPEKKKLQE QLMGAVVMEK PNIRWNDVAG LEGAKEALKE ENSBTAP00000055660/1-437 SKGSDSDSEG DNPEKKKLQE QLMGAVVMEK PNIRWNDVAG LEGAKEALKE ENSTTRP00000009478/1-433 SKGSDSDSEG DNPEKR--QE QLMGAVVMEK PNIRWNDVAG LEGAKEALKE BACU018140/1-746 SKGSDSDSEG DNPEKKKLQE QLMGAVVMEK PNIRWNDVAG LEGAKEALKE 451 500 bmy_05321T0/1-487 AE--EAYFSS FFLVGKRTPW RGILLFGPPG TGKSYLAKAV ATEANNSTFF ENSBTAP00000055660/1-437 AVILPIKFPH LF-TGKRTPW RGILLFGPPG TGKSYLAKAV ATEANNSTFF ENSTTRP00000009478/1-433 AVILPIKFPH LF-TGKRTPW RGILLFGPPG TGKSYLAKAV ATEANNSTFF BACU018140/1-746 AVILPIKFPH LF-TGKRTPW RGILLFGPPG TGKSYLAKAV ATEANNSTFF 501 550 bmy_05321T0/1-487 SVSSSDLMSK WLGESEKLVK NLFELARQHK PSIIFIDEVD SLCGSRNENE ENSBTAP00000055660/1-437 SVSSSDLMSK WLGESEKLVK NLFELARQHK PSIIFIDEVD SLCGSRNENE ENSTTRP00000009478/1-433 SVSSSDLMSK WLGESEKLVK NLFELARQHK PSIIFIDEVD SLCGSRNENE BACU018140/1-746 SVSSSDLMSK WLGESEKLVK NLFELARQHK PSIIFIDEVD SLCGSRNENE 551 600 bmy_05321T0/1-487 SEAARRIKTE FLVQMQGVGN NNDGTLVLGA TNIPWVLDSA IRRRFEKRIY ENSBTAP00000055660/1-437 SEAARRIKTE FLVQMQGVGN NNDGTLVLGA TNIPWVLDSA IRRRFEKRIY ENSTTRP00000009478/1-433 SEAARRIKTE FLVQMQGVGN NNDGTLVLGA TNIPWVLDSA IRRRFEKRIY BACU018140/1-746 SEAARRIKTE FLVQMQGVGN NNDGTLVLGA TNIPWVLDSA IRRRFEKRIY 601 650 bmy_05321T0/1-487 IPLPEEAARA QMFRLHLGST PHNLTDANIH ELARKTEGYS GADISIIVRD ENSBTAP00000055660/1-437 IPLPEEAARA QMFRLHLGST PHNLTEANIH ELARKTEGYS GADISVIVRD ENSTTRP00000009478/1-433 IPLPEEAARA QMFRLHLGST PHNLTDANIH ELARKTEGYS GADISIIVRD BACU018140/1-746 IPLPEEAARA QMFRLHLGST PHNLTDANIH ELARKTEGYS GADISIIVRD 651 700 bmy_05321T0/1-487 SLMQPVRKVQ SATHFKKVCG PSRTNPSIMI DDLLTPCSPG DPGAMEMTWM ENSBTAP00000055660/1-437 SLMQPVRKVQ SATHFKKVCG PSRTNPSIMI DDLLTPCSPG DPGAIEMTWM ENSTTRP00000009478/1-433 SLMQPVRKVQ SATHFKKVCG PSRTNPSIMI DDLLTPCSPG DPGAMEMTWM BACU018140/1-746 SLMQPVRKVQ SATHFKKVCG PSRTNPSIMI DDLLTPCSPG DPGAMEMTWM 701 750 bmy_05321T0/1-487 DVPSDKLLEP VVCMSDMLRS LATTRPTVNA DDLVKVKKFS EDFGQES ENSBTAP00000055660/1-437 DVPGDKLLEP VVCMSDMLRS LATTRPTVNA EDLLKVKKFS EDFGQES ENSTTRP00000009478/1-433 DVPGDKLLEP VVCMSDMLRS LATTRPTVNA DDLLKVKKFS EDFGQES BACU018140/1-746 DVPSDKLLEP VVCMSDMLRS LATTRPTVNA DDLLKVKKFS EDFGQES