KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:12 2014 Check: 00 .. Name: bmy_17372T0/1-149 Len: 222 Check: 2136 Weight: 1.00 Name: BACU006334/1-208 Len: 222 Check: 8892 Weight: 1.00 Name: ENSP00000376349/1-222 Len: 222 Check: 3510 Weight: 1.00 Name: ENSTTRP00000001462/1-221 Len: 222 Check: 7058 Weight: 1.00 Name: ENSBTAP00000055697/1-222 Len: 222 Check: 416 Weight: 1.00 // 1 50 bmy_17372T0/1-149 MERIEGEAVG RCAASPYLLP LRLHYRQNGT QKSWDFMKTH DSVTILMFNS BACU006334/1-208 MTDRRG---- ---------- LHREAQRNGT QKSWDFMKIH DSVTILMFNS ENSP00000376349/1-222 MERIEGASVG RCAASPYLRP LTLHYRQNGA QKSWDFMKTH DSVTVLLFNS ENSTTRP00000001462/1-221 MERIEGAAVG RCAASPYLLP LTLHYRQNGT QKSWDFMKTH DSVTILMFNS ENSBTAP00000055697/1-222 MERIEGVAVG RCAASPYLVP LTLHYRQNGA QKSWDFMKTH DSVTILMFNS 51 100 bmy_17372T0/1-149 SRRSLVLVKQ FRPA------ ---------- ---------- ---------- BACU006334/1-208 SRRSLVLVKQ FRPAVYAGEV ERLFPGSLAA VDQDGPRELR PALPGSAGGT ENSP00000376349/1-222 SRRSLVLVKQ FRPAVYAGEV ERRFPGSLAA VDQDGPRELQ PALPGSAGVT ENSTTRP00000001462/1-221 SRRSLVLVKQ FRPAVYAGEV ERLFPGSLAA ADQDGPRELQ PALPGSAGVT ENSBTAP00000055697/1-222 SRRSLVLVKQ FRPAVYAGEV ERLFPGSLAA AEQDRPQALQ AALPGSAGVT 101 150 bmy_17372T0/1-149 ---------- ---------- ---------- ------DAVS TRRSGVGVTG BACU006334/1-208 FGLWAGLVDQ PGLSLEEVGC KEAWEECGYH LAPSDLRRVA TYKSGVGVTG ENSP00000376349/1-222 VELCAGLVDQ PGLSLEEVAC KEAWEECGYH LAPSDLRRVA TYWSGVGLTG ENSTTRP00000001462/1-221 YELCAGLVDQ PGLSL-EVAC KEAWEECGYH LALSGLRRVA TYKSGVGLTS ENSBTAP00000055697/1-222 YELCAGLLDQ PGLSLEEVAC KEAWEECGYR LAPSDLRRVT SYKSGVGLTG 151 200 bmy_17372T0/1-149 SSQTTLYAGV TDAQRGAQAG G-PGGGEHPE AVHLPLDGAR AFADDPDVPK BACU006334/1-208 SSQTMFYAEV TDAQQGGPGG GLAEEGELIE VVHLPLDGAR AFADDPDVPK ENSP00000376349/1-222 SRQTMFYTEV TDAQRSGPGG GLVEEGELIE VVHLPLEGAQ AFADDPDIPK ENSTTRP00000001462/1-221 SSQTMFYAEV TDAQQGGPGG GLAEEGELIE VVHLPLDGAQ AFADDPDVPK ENSBTAP00000055697/1-222 SSQTMFYAEV TDAQRGSPGG GLAEEGELIE VVHLPLDGAR TFADDPDVPK 201 250 bmy_17372T0/1-149 TLGVIFGISW FLSRVAPGLG PQ BACU006334/1-208 TLGVIFGIWW FLSHVAPGLG PQ ENSP00000376349/1-222 TLGVIFGVSW FLSQVAPNLD LQ ENSTTRP00000001462/1-221 TLGVIFGISW FLSHVAPGLG PQ ENSBTAP00000055697/1-222 TLGVIFGISW FFSCVAPGLG LQ