KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:12 2014 Check: 00 .. Name: ENSBTAP00000055698/1-547 Len: 602 Check: 6116 Weight: 1.00 Name: ENSTTRP00000008951/1-542 Len: 602 Check: 7284 Weight: 1.00 Name: bmy_10975T0/1-586 Len: 602 Check: 5149 Weight: 1.00 Name: BACU018053/1-546 Len: 602 Check: 6013 Weight: 1.00 // 1 50 ENSBTAP00000055698/1-547 ---------- ---------- ---------- --------MP LQDDTLREVW ENSTTRP00000008951/1-542 ---------- ---------- ---------- --------MP LQDDTLREVW bmy_10975T0/1-586 LEPAGGGGEA EPGLAGARGE ASRAAGWPEQ GLWIGTGTMP LQDDTLREVW BACU018053/1-546 ---------- ---------- ---------- --------MP LQDDTLREVW 51 100 ENSBTAP00000055698/1-547 ASDSGHEEEG RSPEVQQRTK ---QRQKLRK KKPEAPEAPC PTGSKPRRPG ENSTTRP00000008951/1-542 ASDSGH-GGG QSPEVPQRTQ XXXXXXXXXX XXTEAPESPC PTGSKPRRPG bmy_10975T0/1-586 ASDSGHEEEG QSPEVQQRTK ---QRQKLRK KKTEAPESPC PTGSKPRRPG BACU018053/1-546 ASDSGHEEEG QSPEVQQRTK ---QRQKLRK KKTEAPESPC PTGSKPRRPG 101 150 ENSBTAP00000055698/1-547 ---------- --AGRKGKPR EEPAQGPAEA RAAQTVYTKF LRDPEAKKRD ENSTTRP00000008951/1-542 ---------- --AGRRRSPR EEPSREPAEA RELQTVYAKF LRDPEAKKRD bmy_10975T0/1-586 GVRKAEPRGA PQAGRRRSPR EEPSREPAEA RELQTVYAKF LRDPEAKKRD BACU018053/1-546 GVRKAEPRGA PQAGRRRSPR EEPSREPAEA RELQTVYAKF LRDPEAKKRD 151 200 ENSBTAP00000055698/1-547 PRETFLVARA PDAPDTEDGD EEEEEDDLED EDEEEEKKER VHLPPKKPPK ENSTTRP00000008951/1-542 PRETFLVARA PDAEDGKEEE EEDEEEE-EE DKEEKEKKEK IRLPPKKPPK bmy_10975T0/1-586 PRETFLVARA PDAEDG---- ---DEEE-EE DKEEKEKKEK IRLPPKKPPK BACU018053/1-546 PRETFLVARA PDAEDG---- ---DEEE-EE DKEEKEKKEE IRLPPKKPPK 201 250 ENSBTAP00000055698/1-547 EKASTDIKER KTKAQGPKGD LGSPGPPLKP LRVKKKEAPA GEGTKIRKMK ENSTTRP00000008951/1-542 EKASADIKER KAKAQGPKED LGSPVPPLKP LRIKKKEASA GEGTKMRKMK bmy_10975T0/1-586 EKASADIKER KAKAQGPKED LGSPVPPLKP LRIKKKEASA GEGTKMRKMK BACU018053/1-546 EKASADIKER KAKAQGPKED LGSPVPPLKP LRIKKKEASA GEGTKMRKMK 251 300 ENSBTAP00000055698/1-547 KKAGSGEADK DCSVSPGTV- KKTPAAMFLV PGECPAEKTL KKKGTPKGSE ENSTTRP00000008951/1-542 KK-GSGEADK DSSGSPTRVR KKTPAAMFLV GGDDPGEKAL KKKGTPKDSE bmy_10975T0/1-586 KK-GSGEADK DSSVSPTRVR KKTPAAMFLV GGDDPGEKAL KKKGTPKGSE BACU018053/1-546 KK-GSGEADK DSSVSPTRVR KKTPAAMFLV GGDDPGEKAL KKKGTPKGSE 301 350 ENSBTAP00000055698/1-547 EEKKEEGEED DEAAAAMTKN SNQKGKAKGK GKKTNRTQRA FTPQMHIPRW ENSTTRP00000008951/1-542 EEKE---EEE EEVAAVVTKN SNQKGKAKGK GKKKTKEERA PSPPVEVDEP bmy_10975T0/1-586 EEKE---EEE EEVAAVVTKN SNQKGKAKGK GKKKTKEERA PSPPVEVDEP BACU018053/1-546 EEKE---EEE EEVAAVVTKN SNQKGKAKGK GKK--KEERA PSPPVEVDEP 351 400 ENSBTAP00000055698/1-547 QSL-LSPAEK GQNIRAKGTS LKKILEIGCY IHWIPLLLCP SPQVFLLAGR ENSTTRP00000008951/1-542 QEFVLRPAPQ GQTVRCRLTR DKKGMDRGLY PSYF-LHLDT EKKVFLLAGR bmy_10975T0/1-586 QEFVLRPAPQ GQTVRCRLTR DKKGMDRGLY PSYF-LHLDT EKKVFLLAGR BACU018053/1-546 QEFVLRPAPQ GQTVRCRLTR DKKGMDRGLY PSYF-LHLDT EKKVFLLAGR 401 450 ENSBTAP00000055698/1-547 KRKRSKTANY LISSDPTNLS RGGENFIGKL RSNLLGNRFT VFDNGQNPHR ENSTTRP00000008951/1-542 KRKRSKTANY LISSDPTNLS RGGENFIGKL -SNLLGNRFT VFDNGQNPHR bmy_10975T0/1-586 KRKRSKTANY LISSDPTNLS RGGENFIGKL RSNLLGNRFT VFDNGQNPHR BACU018053/1-546 KRKRSKTANY LISSDPTNLS RGGENFIGKL RSNLLGNRFT VFDNGQNPHR 451 500 ENSBTAP00000055698/1-547 GGSTDVGSLR QELAAVIYET NVLGFRGPRR MTVIIPGMNS DNERVPIRPR ENSTTRP00000008951/1-542 GGSTDVGSLR QELAAVIYEI NVLG--RSRR MTVIIPGMNS DKERVPIRPR bmy_10975T0/1-586 GGSTDVGSLR QELAAVIYET NVLGFRGPRR MTVIIPGMNS DKERVPIRPR BACU018053/1-546 GGSTDVGSLR QELAAVIYET NVLGFRGPRR MTVIIPGMNS DKERVPIRPR 501 550 ENSBTAP00000055698/1-547 NASDGLLVRW QNKTLESLIE LHNKPPIWNE DSGSYTLNFQ GRVTQASVKN ENSTTRP00000008951/1-542 NASDGLLVRW QNKTLESLIE LHNKPPVWND DSGSYTLNFQ GRVTQASVKN bmy_10975T0/1-586 NASDGLLVRW QNKTLESLIE LHNKPPVWND DSGSYTLNFQ GRVTQASVKN BACU018053/1-546 NASDGLLVRW QNKTLESLIE LHNKPPVWND DSGSYTLNFQ GRVTQASVKN 551 600 ENSBTAP00000055698/1-547 FQIVHADDPD YIVLQFGRVA EDAFTLDYRY PLCALQAFAI ALSSFDGKLA ENSTTRP00000008951/1-542 FQIVHADDPD YIVLQFGRVA EDAFTLDYRY PLCALQAFAI ALSSFDGKLA bmy_10975T0/1-586 FQIVHADDPD YIVLQFGRVA EDAFTLDYRY PLCALQAFAI ALSSFDGKLA BACU018053/1-546 FQIVHADDPD YIVLQFGRVA EDAFTLDYRY PLCALQAFAI ALSSFDGKLA 601 650 ENSBTAP00000055698/1-547 CE ENSTTRP00000008951/1-542 CE bmy_10975T0/1-586 CE BACU018053/1-546 CE