KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:20 2014 Check: 00 .. Name: BACU011891/1-451 Len: 517 Check: 3486 Weight: 1.00 Name: ENSBTAP00000055774/1-315 Len: 517 Check: 6344 Weight: 1.00 Name: bmy_00804T0/1-351 Len: 517 Check: 9220 Weight: 1.00 Name: ENSP00000343248/1-424 Len: 517 Check: 3570 Weight: 1.00 // 1 50 BACU011891/1-451 ---------- ---------- ---------- ---------- ------MQAL ENSBTAP00000055774/1-315 ---------- ---------- ---------- ---------- ---------- bmy_00804T0/1-351 MSHPLPHTRE KMSVGCPEPE PPHSLPCCGP GTGPGLGAGV PLLTEDMQAL ENSP00000343248/1-424 ---------- -MSVGCPEPE PPRSLTCCGP GTAPGPGAGV PLLTEDMQAL 51 100 BACU011891/1-451 TLRTLAASDV TKHYELVREL GKGTYGKVDL VAYKGTGTKM ALKFVNKSKT ENSBTAP00000055774/1-315 ---------- ---------- ---------- ------GTKM ALKFVNKSKT bmy_00804T0/1-351 TLRTLAASDV TKHYELVREL GKGTYGKVDL VAYKGTGTKM ALKFVNKSKT ENSP00000343248/1-424 TLRTLAASDV TKHYELVREL GKGTYGKVDL VVYKGTGTKM ALKFVNKSKT 101 150 BACU011891/1-451 KLKNFLREVS TTNSLSSSPF IIKVFDVVFE TEDCYVFAQE YAPAGDLFDI ENSBTAP00000055774/1-315 KLKNFLREVS ITNSLSSSPF IIKVFDVVFE TEDCYVFAQE YAPAGDLFDI bmy_00804T0/1-351 KLKNFLREVS ITNSLSSSPF IIKVFDVVFE TEDCYVFAQE YAPAGDLFDI ENSP00000343248/1-424 KLKNFLREVS ITNSLSSSPF IIKVFDVVFE TEDCYVFAQE YAPAGDLFDI 151 200 BACU011891/1-451 IPPQVGLPED TVKRCVQQLG LALDFMHGRQ LVHRDIKPEN VLLFDRECRR ENSBTAP00000055774/1-315 IPPQVGLPED TVKRCVQQLG LALDFMHGRQ LVHRDIKPEN VLLFDRECRR bmy_00804T0/1-351 IPPQVGLPED TVKRCVQQLG LALDFMHGRQ LVHRDIKPEN VLLFDRECRR ENSP00000343248/1-424 IPPQVGLPED TVKRCVQQLG LALDFMHGRQ LVHRDIKPEN VLLFDRECRR 201 250 BACU011891/1-451 VKLADFGMTR RVGCRVKRVS GTIPYTAPEV CQAGRADGFA VDTGVDVWAF ENSBTAP00000055774/1-315 VKLADFGMTR RVGCRVKRVS GTIPYTAPEV CQAGRADGFA VDTGVDVWAF bmy_00804T0/1-351 VKLADFGMTR RVGCRVKRVS GTIPYTAPEV CQAGRADGFA VDTGVDVWAF ENSP00000343248/1-424 VKLADFGMTR RVGCRVKRVS GTIPYTAPEV CQAGRADGLA VDTGVDVWAF 251 300 BACU011891/1-451 GVLIFCVLTG NFPWEAASGA DAFFEEFVRW QRGRXXXXXX XXXXXXXXXX ENSBTAP00000055774/1-315 GVLIFCVLTG NFPWEAASGA DAFFEEFVRW QRGRLPGLPS QWRRFTEPAL bmy_00804T0/1-351 GVLIFCVLTG NFPWEAASGA DAFFEEFVRW QRGRLPGLPS QWRRFTEPAL ENSP00000343248/1-424 GVLIFCVLTG NFPWEAASGA DAFFEEFVRW QRGRLPGLPS QWRRFTEPAL 301 350 BACU011891/1-451 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000055774/1-315 RMFQRLLALE PERRGPAKEV FRFLKHELTT GLRGQGPHAP ASLGPGNEFR bmy_00804T0/1-351 RMFQRLLALE PERRGPAKEL IH-------- ---------- ---------D ENSP00000343248/1-424 RMFQRLLALE PERRGPAKEV FRFLKHELTS ELRRRPSHRA RK--PPGDRP 351 400 BACU011891/1-451 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000055774/1-315 ARARPSLACP LAPSPVVRGT EGGSGSRQRS RTRTGSVPAL PIGALLPQPP bmy_00804T0/1-351 VCCGPDLRMQ PWSSMRILDF KGSQSSAG-- ---------- ---------- ENSP00000343248/1-424 PAAGPLRLEA PGPLKRTVLT ESGSGSRPAP PAVGSVPLPV PVPVPVPVPV 401 450 BACU011891/1-451 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000055774/1-315 P--------- ---------- ---------- ---------- ---------- bmy_00804T0/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000343248/1-424 P--------- ---------- ---------- ---------- ---------- 451 500 BACU011891/1-451 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XRRQEGVVVD ARPAAGW--- ENSBTAP00000055774/1-315 ---------- ---------- ---------- ---------- ---------- bmy_00804T0/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000343248/1-424 ---------- ---------- ---------- -VPEPGLAPQ GPPGRTDGRA 501 550 BACU011891/1-451 ---------- ------- ENSBTAP00000055774/1-315 ---------- ------- bmy_00804T0/1-351 ---------- ------- ENSP00000343248/1-424 DKSKGQVVLA TAIEICV