KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:22 2014 Check: 00 .. Name: ENSP00000370394/1-620 Len: 686 Check: 1587 Weight: 1.00 Name: BACU015735/1-566 Len: 686 Check: 3992 Weight: 1.00 Name: ENSTTRP00000007955/1-620 Len: 686 Check: 2553 Weight: 1.00 Name: bmy_18438T0/1-563 Len: 686 Check: 4047 Weight: 1.00 Name: ENSBTAP00000055796/1-681 Len: 686 Check: 6155 Weight: 1.00 // 1 50 ENSP00000370394/1-620 MSALTPPTD- ---------- ---------- ---------- -------MPT BACU015735/1-566 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007955/1-620 MSALTPPTD- ---------- ---------- ---------- -------MPT bmy_18438T0/1-563 MAETSPPPTA GAESCSEEPA RGGKQRLEEP RSAPAGGADR EDEAGPPLAS ENSBTAP00000055796/1-681 MAETSPPPTA GAESCSEEPA RGGKQRPEEP RRAPAGGADR EDEAGPPLAS 51 100 ENSP00000370394/1-620 PTTDKITQAA METIYLCKFR VSMDGEWLC- LRELDDISLT PDPEPTHEDP BACU015735/1-566 ---------- ---------- ---------- ---------- --MRDDTEDP ENSTTRP00000007955/1-620 PTTDKITQAA METIYLCKFR VSMDGEWLC- LRELDDISLT PDPEPTHEDP bmy_18438T0/1-563 PAGQSEPGSP VAAPFFLLYS GDGGAGFVAR PPPQQQRSWR TPPSPGSPLP ENSBTAP00000055796/1-681 PAGQSEPGSP VAAPFFLLYP GDGGAGFVAR PPPQQQRSWR TPPSPGSPLP 101 150 ENSP00000370394/1-620 ---------- ---------N YLMANERMNL MNMAKLSIKG LIESALNLGR BACU015735/1-566 ---------- ---------N YLMANERMNL MNMAKLSIKG LIESALNLGR ENSTTRP00000007955/1-620 ---------- ---------N YLMANERMNL MNMAKLSIKG LIESALNLGR bmy_18438T0/1-563 FLLLNYPSGG GGGGGKHQ-T YVLN------ ---------- ---------- ENSBTAP00000055796/1-681 FLLLNYPSGG GGGGGKHHPN YLMANERMNL MNMAKLSIKG LIESALNLGR 151 200 ENSP00000370394/1-620 TLDSDYAPLQ QFFVVMEHCL KHGLKAKKTF LGQNKSFWGP LELVEKLVPE BACU015735/1-566 TLDSDYAPLQ QFFVVMEHCL KHGLKAKKTF LGQNKSFWGP LELVEKLVPE ENSTTRP00000007955/1-620 TLDSDYAPLQ QFFVVMEHCL KHGLKAKKTF LGQNKSFWGP LELVEKLVPE bmy_18438T0/1-563 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055796/1-681 TLDSDYAPLQ QFFVVMEHCL KHGLKAKKTF LGQNKSFWGP LDIVRRALVI 201 250 ENSP00000370394/1-620 AAEITASVKD LPGLKTPVGR GRAWLRLALM QKKLSEYMKA LINKKELLSE BACU015735/1-566 AAEITASVKD LPGLKTPVGR GRAWLRLALM QKKLSEYMKA LINKKELLSE ENSTTRP00000007955/1-620 AAEITASVKD LPGLKTPVGR GRAWLRLALM QKKLSEYMKA LINKKELLSE bmy_18438T0/1-563 ---------- ----RTPVGR GRAWLRLALM QKKLSEYMKA LINKKELLSE ENSBTAP00000055796/1-681 ALWISASESQ ETRSRTPVGR GRAWLRLALM QKKLSEYMKA LINKKELLSE 251 300 ENSP00000370394/1-620 FYEPNALMME EEGAIIAGLL VGLNVIDANF CMKGEDLDSQ VGVIDFSMYL BACU015735/1-566 FYEPNALMME EEGAIIAGLL VGLNVIDANF CMKGEDLDSQ VGVIDFSMYL ENSTTRP00000007955/1-620 FYEPNALMME EEGAIIAGLL VGLNVIDANF CMKGEDLDSQ VGVIDFSMYL bmy_18438T0/1-563 FYEPNALMME EEGAIIAGLL VGLNVIDANF CMKGEDLDSQ VGVIDFSMYL ENSBTAP00000055796/1-681 FYEPNALMME EEGAIIAGLL VGLNVIDANF CMKGEDLDSQ VGVIDFSMYL 301 350 ENSP00000370394/1-620 KDGNSSKGTE GDGQITAILD QKNYVEELNR HLNATVNNLQ AKVDALEKSN BACU015735/1-566 KDGNSSKGSE GDGQITAILD QKNYVEELNR HLNATVNNLQ AKVDALEKSN ENSTTRP00000007955/1-620 KDGNSSKGSE GDGQITAILD QKNYVEELNR HLNATVNNLQ AKVDALEKSN bmy_18438T0/1-563 KDGNSSKGSE GDGQITAILD QKNYVEELNR HLNATVNNLQ AKVDALEKSN ENSBTAP00000055796/1-681 KDGNSSKGSE GDGQITAILD QKNYVEELNR HLNATVNNLQ AKVDALEKSN 351 400 ENSP00000370394/1-620 TKLTEELAVA NNRIITLQEE MERVKEESSY ILESNRKGPK QDRTAEGQAL BACU015735/1-566 TKLTEELAVA NNRIITLQED MERVKEESSY ILESNRKGPK PDRTSEGQAL ENSTTRP00000007955/1-620 TKLTEELAVA NNRIITLQED MERVKEESSY ILESNRKGPK PDRTSEGQAL bmy_18438T0/1-563 TKLTEELAVA NNRIITLQED MERVKEESSY ILESNRKGPK PDRTSEGQAL ENSBTAP00000055796/1-681 TKLTEELAVA NNRIITLQEE MERVKEESSY ILESNRKGPK PDRTSEGQAL 401 450 ENSP00000370394/1-620 SEARKHLKEE TQLRLDVEKE LEMQISMRQE MELAMKMLEK DVCEKQDALV BACU015735/1-566 SEARKHLKEE TQLRLDVEKE LEIQISMRQE MELAMKMLEK DVCEKQDALV ENSTTRP00000007955/1-620 SEARKHLKEE TQLRLDVEKE LEIQISMRQE MELAMKMLEK DVCEKQDALV bmy_18438T0/1-563 SEARKHLKEE TQLRLDVEKE LEIQISMRQE MELAMKMLEK DVCEKQDALV ENSBTAP00000055796/1-681 SEARKHLKEE TQLRLDVEKE LEIQISMRQE MELAMKMLEK DVCEKQDALV 451 500 ENSP00000370394/1-620 SLRQQLDDLR ALKHELAFKL -QSSDLGVKQ KSELNSRLEE KTNQMAATIK BACU015735/1-566 SLRQQLDDLR ALKHELAFKL -QSSDLGVKQ KSELNSRLEE KTNQMAATIK ENSTTRP00000007955/1-620 SLRQQLDDLR ALKHELAFKL -QSSDLGVKQ KSELNSRLEE KTNQMAATIK bmy_18438T0/1-563 SLRQQLDDLR ALKHELAFKL -QSSDLGVKQ KSELNSRLEE KTNQMAATIK ENSBTAP00000055796/1-681 SLRQQLDDLR ALKHELAFKL QQSSDLGVKQ KSELNSRLEE KTNQMAATIK 501 550 ENSP00000370394/1-620 QLEQRLRQAE RSRQSAELDN RLFKQDFGDK INSLQLEVEE LTRQRNQLEL BACU015735/1-566 QLEQRLRQAE RGRQSAELDN RLFKQDFGDK INSLQLEVEE LTRQRNQLEL ENSTTRP00000007955/1-620 QLEQRLRQAE RGRQSAELDN RLFKQDFGDK INSLQLEVEE LTRQRNQLEL bmy_18438T0/1-563 QLEQRLRQAE RGRQSAELDN RLFKQDFGDK INSLQLEVEE LTRQRNQLEL ENSBTAP00000055796/1-681 QLEQRLRQAE RGRQSAELDN RLFKQDFGDK INSLQLEVEA LTRQRNHLEL 551 600 ENSP00000370394/1-620 ELKQEKERRL QNDRSIPGRG SQKS-ESKMD GKHKMQEENV KLKKPLEESH BACU015735/1-566 ELKQERE-RL QNNKSIPGKG SQKP-EPKTD GKHKIQEENV KLKKPLEESH ENSTTRP00000007955/1-620 ELKQERERRL QNNRSIPGKG SQKP-EPKTD EKHKIEEENV KLKKPLEESH bmy_18438T0/1-563 ELKQERERRL QNNKSIPGKG SQKP-EPKTD GKHKIQEENV KLKKPLEESH ENSBTAP00000055796/1-681 ELKQERERRL QNSRSIPGKG SQKPEEPKMD GKHKIQEENV KLNKPLEESH 601 650 ENSP00000370394/1-620 RLQPHPMDEQ DQLLLSEK-P QLCQLCQEDG SLTK-NVCKN ----CSGTFC BACU015735/1-566 RLQSHPVNEQ DPPLPSEK-P QTCQLCQEDC SLTK-NVCKN ----CRGTFC ENSTTRP00000007955/1-620 RLPSHPVNEQ DQPLPSEK-P QMCQLCQEDC SLTK-NVCKN ----CRGTFC bmy_18438T0/1-563 RLQSHPVNEQ DQPLPSEK-P QTCQLCQEDC SLTKVTVARN EQVLHRDAHC ENSBTAP00000055796/1-681 RLQSHPVDQQ DQPLPSEKPP KYCQLCQEDC SLTK-NVCRN ----CRGTFC 651 700 ENSP00000370394/1-620 DACSTNELPL PSSIKLERVC NPCHKHLMKQ YSTSPS BACU015735/1-566 NACSTNELPL PSSIKPERVC NPCHEHLMKQ YSSSPL ENSTTRP00000007955/1-620 NACSTNELPL PSSIKPERVC SPCHEHLMKQ YSSSPL bmy_18438T0/1-563 TTSRFSQ--- ---------- ---------- ------ ENSBTAP00000055796/1-681 NICSTNELPL PSSIKPERVC NPCHEHLMKQ YSTSPS