KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:22 2014 Check: 00 .. Name: bmy_13872T0/1-681 Len: 830 Check: 5626 Weight: 1.00 Name: ENSTTRP00000001978/1-816 Len: 830 Check: 9539 Weight: 1.00 Name: BACU009828/1-760 Len: 830 Check: 8342 Weight: 1.00 Name: ENSBTAP00000055798/1-627 Len: 830 Check: 3913 Weight: 1.00 // 1 50 bmy_13872T0/1-681 MWSCRRLGGR GKTCTRSGPC GRVSCGFNVH GLGSVPGRCC GL-----CVG ENSTTRP00000001978/1-816 MAAAEAAAHN D-----PGPA QELLVAWNTV STGLVPPAAL GL-----ASS BACU009828/1-760 MAAAEAAAHN D-----PGPA QELLVAWNTV STGLVPPAAL GLFSVLQASS ENSBTAP00000055798/1-627 -MAAAAEAGR D-----AGPA QELLAAWNTV STGLVPPAAL GL-----ASS 51 100 bmy_13872T0/1-681 GSRCAWDPQG VSIRSDVAPC VG-------- ----ATVAGD EHGCWCV--W ENSTTRP00000001978/1-816 RTSGAVPPKE EELRAAVEVL RGHGLHSVLE EWFAEVLQND LQANISLEFW BACU009828/1-760 RTSGAVPPKE EELRAAVEVL RGHGLHSVLE EWFAEVLQND LQSNISLEFW ENSBTAP00000055798/1-627 RTSGAVPPKE EELRAAVEVL RGHGLHSVLE EWFVEVLQTD LQANISLEFW 101 150 bmy_13872T0/1-681 KG-------- --PGC--VLM EALG------ ---------- ---------- ENSTTRP00000001978/1-816 NAIS-RENCA DEPQCLLLLL DAFGLLESR- DPYLRXXXXX XXXXXXXXXX BACU009828/1-760 NAVSQRENCA DEPQCLLLLL DAFGLLESRL DPYLRSLELL EKWTRLGLLM ENSBTAP00000055798/1-627 NAISQRENCA DEPQCLLLLL DAFGLLESRL DPYLRSLELL EKWTRLGLLM 151 200 bmy_13872T0/1-681 ---------- ------GLLW VPRPADFN-- ---------- VLLVSRVGGL ENSTTRP00000001978/1-816 XXXXXXXXXX XXXXXXXXXX XXXXRTFQEM IQRLYGRFLR VYMQSKRRGE BACU009828/1-760 GTGAQGLREK VHTTLRGVLF FSTPRTFQEM IQRLYGRFLR VYMQSKRKGE ENSBTAP00000055798/1-627 GTGAQGLREK VHTTLRGVLF FSTPRAFQEM IQRLYGRFLR VYMQSKRKGE 201 250 bmy_13872T0/1-681 GGSQGPASGA -GSCVASPR- -------LCS GRGPQ----- ---------- ENSTTRP00000001978/1-816 GGTDPELEGE -DSRYARRRY Y-LLQSPLCA GCGSDKQQCW CRQALEQFHQ BACU009828/1-760 GGTDPELEGE LDSRYARRRY YRLLQSPLCA GCGSDKQQCW CRQALEQFHQ ENSBTAP00000055798/1-627 GGTDPELEGE LDSRYARRRY YRLLQSPLCA GCGSDKQRCW CRQALEQFHR 251 300 bmy_13872T0/1-681 ---------- ----SPTPVS S--------- ---------- -------RQW ENSTTRP00000001978/1-816 LSQVLHRLSL LERVSAEAVT TTLHQVTRER MEDRCRGEYE RSFLREFHKW BACU009828/1-760 LSQVLHRLSL LERVSAEAVT TTLHQVTRER MEDRCRGEYE RSFLREFHKW ENSBTAP00000055798/1-627 LSQVLHRLSL LERVSAEAVT STLHQVTRER MEDRCRGEYE RSFLREFHKW 301 350 bmy_13872T0/1-681 IERVVGWLGK VFLQDGPSRP ASPEAGSSLR RWRCHVQRFF YRIYASLRIE ENSTTRP00000001978/1-816 IERVVGWLGK VFLQDGPSRP ASPEAGSSLR RWRCHVQRFF YRIYASLRIE BACU009828/1-760 IERVVGWLGK VFLQDGPSRP ASPEAGSSLR RWRCHVQRFF YRIYASLRIE ENSBTAP00000055798/1-627 IERVVGWLGK VFLQDGPSRP ASPEPGTTLR RWRCHVQRFF YRIYAGLRIE 351 400 bmy_13872T0/1-681 ELFSIIRDFP DSRPAVEDLK YCLERTDQRP QLLVSLKAAL ETRLLHPGVN ENSTTRP00000001978/1-816 ELFSIIRDFP DSRPAVEDLK YCLERTDQRP QLLVSLKAAL ETRLLHPGVN BACU009828/1-760 ELFSIIRDFP DSRPAVEDLK YCLERTDQRP QLLVSLKAAL ETRLLHPGVN ENSBTAP00000055798/1-627 ELFSIIRDFP DSRPAVEDLK YCLERTDQRP QLLVSLKAAL ETRLLHPGVN 401 450 bmy_13872T0/1-681 TCDIITLYIS AIKALRVLDP SMVVLEVACE PIRRYLRTRE DTVRQIVAGL ENSTTRP00000001978/1-816 TCDIITLYIS AIKALRVLDP SMVVLEVACE PIRRYLRTRE DTVRQIVAGL BACU009828/1-760 TCDIITLYIS AIKALRVLDP SMVVLEVACE PIRRYLRTRE DTVRQIVAGL ENSBTAP00000055798/1-627 TCDIITLYIS AIKALRVLDP SMVVLEVACE PIRRYLRTRE DTVRQIVAGL 451 500 bmy_13872T0/1-681 TGDSDGTGDL AVELSKTDPA SLETGQDSED DSGEPEDWVP DPVDADPGKS ENSTTRP00000001978/1-816 TGDSDGTGDL AVELSKTDPA SLETGQDSED DSGEPEDWVP DPVDADPGKS BACU009828/1-760 TGDSDGTGDL AVELSKTDPA SLETGQDSED DSGEPEDWVP DPVDADPGKS ENSBTAP00000055798/1-627 TGDSDGTGDL AVELSKTDPA SLETGQDSED DSGEPEDWVP DPVDADPGKS 501 550 bmy_13872T0/1-681 SSKRRSSDII SLLVSIYGSK DLFINEYRSL LADRLLHQFS FSPEREIRNV ENSTTRP00000001978/1-816 SSKRRSSDII SLLVSIYGSK DLFINEYRSL LADRLLHQFS FSPEREIRNV BACU009828/1-760 SSKRRSSDII SLLVSIYGSK DLFINEYRSL LADRLLHQFS FSPEREIRNV ENSBTAP00000055798/1-627 SSKRRSSDII SLLVSIYGSK DLFINEYRSL LADRLLHQFS FSPEREIRNV 551 600 bmy_13872T0/1-681 ELLKLRFGEA PMHFCEVMLK DMADSRRINA NIREEDEKRP AEEQPPFGVY ENSTTRP00000001978/1-816 ELLKLRFGEA PMHFCEVMLK DMADSRRINA NIREEDEKRP AEEQPPFGVY BACU009828/1-760 ELLKLRFGEA PMHFCEVMLK DMADSRRINA NIREEDEKRP AEEQPPFGVY ENSBTAP00000055798/1-627 ELLKLRFGEA PMHFCEVMLK DMADSRRINA NIREEDEKRP AEEQPPFGVY 601 650 bmy_13872T0/1-681 AVILSSEFWP PFKDEKLEVP EDVREALEVY CRKYEKLKAM RTLSWKHTLG ENSTTRP00000001978/1-816 AVILSSEFWP PFKDEKLEVP EDIREALEVY CRKYEKLKAM RTLSWKHTLG BACU009828/1-760 AVILSSEFWP PFKDEKLEVP EDVREALEVY CRKYEKLKAM RTLSWKHTLG ENSBTAP00000055798/1-627 AVILSSEFWP PFKDEKLEVP EDIREALEVY CRKYEKLK-- ---------- 651 700 bmy_13872T0/1-681 LVTMDVELAD RTLSVAVTPV QAVVLLYFQD QASWTLEELS KVVKMPVALL ENSTTRP00000001978/1-816 LVTMDVELAD RTLSVAVTPV QAVVLLYFQD QASWTLEELS KVVKMPVALL BACU009828/1-760 LVTMDVELAD RTLSVAVTPV QAVVLLYFQD QE-------- ---------- ENSBTAP00000055798/1-627 ---------- ---------- ---------- ---------- ---------- 701 750 bmy_13872T0/1-681 RRRVSVWLQQ GVLREEPAGT FSVVEEERPQ DRDSMVLIDS DDESDSGMAS ENSTTRP00000001978/1-816 RRRVSVWLQQ GVLREEPAGT FSVVEEERPQ DRDSMVLVDS DDESDSGMAS BACU009828/1-760 ---------- ---RGLTAGP RPLCPQ---- ---------- ---------- ENSBTAP00000055798/1-627 ---------- ---------- ---------- ---------- ---------- 751 800 bmy_13872T0/1-681 QADQKEEELL LFWTYIQAML TNLESLSLER IYSMLRMFVV TGPALAEIDL ENSTTRP00000001978/1-816 QADQREEELL LFWTYIQAML TNLESLSLER IYSMLRMFVV TGPALAEIDL BACU009828/1-760 ---------- LFWTYIQAML TNLESLSLER IYSMLRMFVV TGPALAEIDL ENSBTAP00000055798/1-627 ---------- ---------- ---------- ---------- ---------- 801 850 bmy_13872T0/1-681 QELQGFLQRK VRDQQLVYSA GVYRLPKSCG ENSTTRP00000001978/1-816 QELQGFLQRK VRDQQLVYSA GVYRLPKSCG BACU009828/1-760 QELQGFLQRK VRDQQLVYSA GVYRLPKSCG ENSBTAP00000055798/1-627 ---------- ---------- ----------