KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:23 2014 Check: 00 .. Name: ENSTTRP00000013053/1-232 Len: 240 Check: 2912 Weight: 1.00 Name: ENSBTAP00000055823/1-239 Len: 240 Check: 8502 Weight: 1.00 Name: ENSP00000280734/1-240 Len: 240 Check: 9723 Weight: 1.00 Name: bmy_03632T0/1-240 Len: 240 Check: 225 Weight: 1.00 Name: BACU005603/1-240 Len: 240 Check: 957 Weight: 1.00 // 1 50 ENSTTRP00000013053/1-232 -------VKS EGPKLVPFFK ATCVYFVLWL PSSSPSWVSA LVK-LPILGL ENSBTAP00000055823/1-239 -LSHVFQVKS EGPKLVPFFK ATCVYFVLWL PSSSPSWVSA LIKCLPIFCL ENSP00000280734/1-240 MVSPVTVVKS EGPKLVPFFK ATCVYFVLWL PSSSPSWVST LIKCLPIFCL bmy_03632T0/1-240 MVSPVTVVKS EGPKLVPFFK ATCVYFVLWL PSSSPSWVSA LIKCLPIFCL BACU005603/1-240 MVSPVTVVKS EGPKLVPFFK ATCVYFVLWL PLSSPSWVSA LIKCLPIFCL 51 100 ENSTTRP00000013053/1-232 KLFILDHGLG FQRAHPSXXX XXXXXXXXXX XXXXXXXXXX XXXXXXLLMF ENSBTAP00000055823/1-239 WLFLLAHGLG FLLTHPSATR IFVGLVFSAI GDAFLIWQDQ GYFVHGMLMF ENSP00000280734/1-240 WLFLLAHGLG FLLAHPSATR IFVGLVFSAV GDAFLIWQDQ GYFVHGLLMF bmy_03632T0/1-240 WLFLLAHGLG FLLAHSSATR IFVGLVFSAL GDAFLIWQDQ GYFVHGLLMF BACU005603/1-240 WLFLLAHGLG FLLAHPSATR IFVGLVFSAL GDAFLIWQDQ GYFVHGLLMF 101 150 ENSTTRP00000013053/1-232 AVTHMFYASA FGMRPLALRT GLVMAVLSGL CYALLYPCLT GAFTYLVGVY ENSBTAP00000055823/1-239 AVTHMLYASA FGMRPLGLRT GLLMVILSGL CYAFLYPNLT GAFTYIVGVY ENSP00000280734/1-240 AVTHMFYASA FGMQPLALRT GLVMAALSGL CYALLYPCLS GAFTYLVGVY bmy_03632T0/1-240 AVTHMCYASA FGMRPLALRT GLVMAVLSGL CYALLYPCLT GAFTYLVGVY BACU005603/1-240 AVTHMFYASA FGMRPLALRT GLVMAVLSGL CYALLYPCLT GAFTYLVGVY 151 200 ENSTTRP00000013053/1-232 MALISFMGWR AVAGLQLVGT AWRWTELAAG SGALLFIVSD LTIALNKFCF ENSBTAP00000055823/1-239 VAIIGFMGWR AMAGLQLVGA AWRWTELAAG TGALLFIVSD LTIALDKFCF ENSP00000280734/1-240 VALIGFMGWR AMAGLRLAGA DWRWTELAAG SGALFFIISD LTIALNKFCF bmy_03632T0/1-240 MALISFMGWR AVAGLQLVGT AWRWTELAAG SGALLFIVSD LTIALNKFCF BACU005603/1-240 MALISFMGWR AVAGLQLVGT AWRWTELAAG SGALLFIVSD LTIALNKFCF 201 250 ENSTTRP00000013053/1-232 PVPYSRALIM STYYAAQMLI ALSAVESREP VEDYRLSKAK ENSBTAP00000055823/1-239 PVPYSRALIM STYYAAQMLI ALSAVESREP VEDYRLSKAK ENSP00000280734/1-240 PVPYSRALIM STYYVAQMLV ALSAVESREP VEHYRLTKAN bmy_03632T0/1-240 PVPYSRALIM STYYAAQMLI ALSAVESREP VEDYRPSKAK BACU005603/1-240 PVPYSRALIM STYYTAQMLI ALSAVESREP VEDYRPSKAK