KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:24 2014 Check: 00 .. Name: ENSP00000201586/1-365 Len: 365 Check: 9614 Weight: 1.00 Name: ENSBTAP00000055826/1-322 Len: 365 Check: 6458 Weight: 1.00 Name: ENSTTRP00000007732/1-340 Len: 365 Check: 9059 Weight: 1.00 Name: bmy_06428T0/1-289 Len: 365 Check: 3394 Weight: 1.00 Name: BACU002179/1-332 Len: 365 Check: 7823 Weight: 1.00 // 1 50 ENSP00000201586/1-365 MDGPAEPQIP GLWDTYEDDI SEISQKLPGE YFRYKGVPFP VGLYSLESIS ENSBTAP00000055826/1-322 MGEPAEPRNQ AKWDPYEKKI SAISQNLSGE YFRYKGILFP VGIYSPESIS ENSTTRP00000007732/1-340 MEEPAEPGNQ AAWDPYEKNI SEISQNLSGE YFRYKGILFP VGIYSPESIS bmy_06428T0/1-289 MDEPAEPGNQ SAWDPYEKNI SEISQNLSGE YFRYKGILFP VGIYSPESIS BACU002179/1-332 MDEPAEPGNQ SAWDPYEKNI SEISQNLSGE YFRYKGILFP VGIYSPESIS 51 100 ENSP00000201586/1-365 LAENTQDVRD DDIFIITYPK SGTTWMIEII CLILKEGDPS WIRSVPIWER ENSBTAP00000055826/1-322 MVENA-EVHD DDIFIVTYPK SGTNWMIEIL SLILKDGDPS WIHSVPIWKR ENSTTRP00000007732/1-340 IAENS-EVQD DDIFIITYPK SGTNWMIEIL SLILKDGDPS WIRSVPIWKR bmy_06428T0/1-289 IAENS-EVQD DDIFIITYPK SGTNWMIEIL SLIVKDGDPS WIRSVPIWKR BACU002179/1-332 IAENS-EVQD DDIFIITYPK SGTNWMIEIL SLILKDGDPS WIRSVPIWKR 101 150 ENSP00000201586/1-365 APWCETIVGA FSLPDQYSPR LMSSHLPIQI FTKAFFSSKA KVIYMGRNPR ENSBTAP00000055826/1-322 SPWCEAIMGA FSLPNQPSPR LMSSHLPIQL FAKAFFNSKA KVIYMGRNPR ENSTTRP00000007732/1-340 SPWCEAIMGA FSLPDQPSPR LMSSHLPIQL FTKAFFNSKA KVIYMGRNPR bmy_06428T0/1-289 SPWCEAIMGA FSLPDQPSPR LMSSHLPIQL FTKAFFNSKA KVIYMGRNPR BACU002179/1-332 SPWCEAIMGA FSLPDQPSPR LMSSHLPIQL FTKAFFNSKA KVIYMGRNPR 151 200 ENSP00000201586/1-365 DVVVSLYHYS KIAGQLKDPG TPDQFLRDFL KGEVQFGSWF DHIKGWLRMK ENSBTAP00000055826/1-322 DVAVSLYHYS KIARQLKDPG TPDQFLENFL KGEVQFGSWL DQIHRWQQST ENSTTRP00000007732/1-340 DVVVSLYHYS KIARQLKDPG TPDQFLKNFL KGEVQFGSWF DHIKGWIRMQ bmy_06428T0/1-289 DVVVSLYHYS KIARQLKDPG TPDQFLKNFL KGEVQFGSWF DHIKGWIRMQ BACU002179/1-332 DVVVSLYHYS KIARQLKDPG TPDQFLKNFL KGEVQFGSWF DHIKGWIRMQ 201 250 ENSP00000201586/1-365 GKDNFLFITY EELQQDLQGS VERICGFLGR PLGKEALGSV VAHSTFSAMK ENSBTAP00000055826/1-322 GSRNFIFHSG EEQGQDLRSS VQRICQFLSR PLGEEALESV VAHSAFKAMK ENSTTRP00000007732/1-340 GKENFLFITY EELQQDLHSS VQRICQFLGR PLGEEALESV VAHSAFKAMK bmy_06428T0/1-289 GKENFLFITY EELQQDLHSS VQRICQFLGR PLGEEALESV ---------- BACU002179/1-332 GKENFLFITY EELQQDLHSS VQRICQFLGR PLGEEALESV VAHSAFKAMK 251 300 ENSP00000201586/1-365 ANTMSNYTLL PPSLLDHRRG AFLRKGVCGD WKNHFTVAQS EAFDRAYRKQ ENSBTAP00000055826/1-322 ANPMSNFSLL PHSLLDQRHG AFLRKGVCGD WKNHFTLAQS EAFDRAYREQ ENSTTRP00000007732/1-340 ANTMSNFSLL PPSLLDQSHG AFLRKGICGD WKNHFTVAQS EAFDRVYRER bmy_06428T0/1-289 ---------- ---------- ---------- ---------S EAFDRVYRER BACU002179/1-332 ANTMSNFSLL PPSLLDQRH- -----GICGD WKNHFTVAQS EAFDRVYRER 301 350 ENSP00000201586/1-365 MRGMPTFPWD EDPEEDGSPD PEPSPEPEPK PSLEPNTSLE REPRPNSSPS ENSBTAP00000055826/1-322 MRGLPTFPWD VDP-DAS-PD SDPGP----- ---------- ---------- ENSTTRP00000007732/1-340 MRGLPTFPWD VDPEDAG-PD PDPSPD---- ---------- --------PS bmy_06428T0/1-289 MRGLPTFPWD VDHEDAG-PD PDPSPD---- ---------- --------PS BACU002179/1-332 MRGLPTFPWD VDPEDAG-PD PDPSPD---- ---------- --------PS 351 400 ENSP00000201586/1-365 PSPGQASETP HPRPS ENSBTAP00000055826/1-322 ---------- ----- ENSTTRP00000007732/1-340 PSPDQASEPP HP-PE bmy_06428T0/1-289 ASPDQASEPP HP--- BACU002179/1-332 ASPDQASEPP HP---