KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:24 2014 Check: 00 .. Name: ENSP00000385213/1-809 Len: 826 Check: 6301 Weight: 1.00 Name: ENSBTAP00000055834/1-798 Len: 826 Check: 787 Weight: 1.00 Name: ENSTTRP00000012545/1-808 Len: 826 Check: 8447 Weight: 1.00 Name: bmy_11230T0/1-802 Len: 826 Check: 1002 Weight: 1.00 Name: BACU007839/1-808 Len: 826 Check: 7311 Weight: 1.00 // 1 50 ENSP00000385213/1-809 ---------- -------MYE ALPGPAPENE DGLVKVKEED PTWEQVCNSQ ENSBTAP00000055834/1-798 ---------- -------MDE VLQDSAPENG DGLVKVKEED PTWEQTCSSQ ENSTTRP00000012545/1-808 ---------- -------MDE ASPGPAPENG DSLVKVKEED PTWEQMCSSQ bmy_11230T0/1-802 MAARGVVEEE LTGLRVNMDE ASPGPAPENG DSLVKVKEED PTWEQMCSSQ BACU007839/1-808 ---------- -------MDE ASPGPAPENG DSLVKVKEED PTWEQMCSSQ 51 100 ENSP00000385213/1-809 EGSSHTQEIC RLRFRHFCYQ EAHGPQEALA QLRELCHQWL RPEMHTKEQI ENSBTAP00000055834/1-798 QSVPNTRELC RLRFRHFCYQ EVPGPREALA QLRELCHQWL SPETHSKERI ENSTTRP00000012545/1-808 DSSSHTLELC RLRFRRFCYQ EVTGPREALA QLQELCHQWL RPETHTKEQI bmy_11230T0/1-802 ESSSHTLELC RLRFRQFCYQ EVTGPREALA QLQELCHQWL RPETHTKEQI BACU007839/1-808 ESSSHTLELC RLRFRQFCYQ EVTGPREALA QLQELCHQWL RPETHTKERI 101 150 ENSP00000385213/1-809 MELLVLEQFL TILPKELQPC VKTYPLESGE EAVTVLENLE TGSGDTGQQA ENSBTAP00000055834/1-798 LELLVLEQFL TILPEELQAR VQACSLESGE DAVIALESLE RDTGDSGEQA ENSTTRP00000012545/1-808 LELLVLEQFL TILPQELQAW VQVYPLESGE DAVTVLENLE KDTGASGQQA bmy_11230T0/1-802 LELLVLEQFL TILPEELQAW VQAYPLESGE DAVTVLENLE KDTGDSGQQ- BACU007839/1-808 LELLVLEQFL TILPEELQAW VQAYPLESGE DAVTVLENLE KDTGDSGQQV 151 200 ENSP00000385213/1-809 SVYIQGQDMH PMVAEYQGVS LECQSLQLLP GITTLKCEPP QRPQGNPQEV ENSBTAP00000055834/1-798 SVYTVGQDLH LLVTEYQGTS SECQSAQLLL GATTLKSEPP ESLQETSQEV ENSTTRP00000012545/1-808 SVYTQGQDMH LPVTEYQGTS LGCQRPQLLP GVTTLKCEPP EPHQEVAQEV bmy_11230T0/1-802 ---------- ---------- --CQRPQLLP GVTTLKCEPP EPHQEVAQEV BACU007839/1-808 SVYSQGQDMH LPVTEYQGTS LECQRPQLLP GVTTLKCEPP EPRQEVAQEV 201 250 ENSP00000385213/1-809 SGPVPHGSAH LQEKNPRDKA VVPVFNPVRS QTLVKTEEET AQAVAAEKWS ENSBTAP00000055834/1-798 SGPAPQRPDP LQEENPRDQA AVLGLNSARS QTSVKTEE-A APLLVSEEWP ENSTTRP00000012545/1-808 SXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XTSVKTEEAA AQGLIPEQWP bmy_11230T0/1-802 SGPAPQGPAP PQEENPRDQA AVPGSNSARS QTSVKTEEAA AQALVPEEWP BACU007839/1-808 SGPAPQGPAP PQEENPRDQA AEPGSNSARS QTSVKTEEAA AQALVPEEWP 251 300 ENSP00000385213/1-809 HLSLTRRNLC GNSAQETVMS LSPMTEEIVT KDRLFKAKQE TSEEMEQSGE ENSBTAP00000055834/1-798 VPSL------ ---AQEEATD VSLMAEEVVT KDGFFNAKQE TSEEMERGAE ENSTTRP00000012545/1-808 HLSLAQRNLC GNSAQEKVTN ISLMPEEVVT KDGLFNTKQE TSEEMERGAE bmy_11230T0/1-802 HLSLAQRNLY GNSAQEKVTN ISLMAEEVVT KDGLFNTKQE TSEEMERGAE BACU007839/1-808 HLSLAQRNIY GNSAQEKVTN ISLMAEEVVT KDGLFNTKQE TSEEMERGAE 301 350 ENSP00000385213/1-809 ASGKPNRECA PQIPCSTPIA TERTVAHLNT LKDRHPGDLW ARMHISSLEY ENSBTAP00000055834/1-798 ASGIVNRDCV PQTPCDTPVP AERTLVHLNT LKDRHPGDLW ARMHISSLEY ENSTTRP00000012545/1-808 VSGIPNRDWV PQAPCSTPVP AERTVAHLNT LKDRHPADLW ARMHISSLEY bmy_11230T0/1-802 VSGIPNRDCV PQAPCSTPVP AERTVAHWNT LKDRHPADMW TRMHISSLEY BACU007839/1-808 VSGIPNRDCV PQAPCSTPVP AERTVAHWNT LKDRHPADMW TRMHISSLEY 351 400 ENSP00000385213/1-809 AAGDITRKGR KKDKARVSEL LQGLSFSGDS DVEKDNEPEI QPAQKKLKVS ENSBTAP00000055834/1-798 AAGDITRKGR KKDKARVSEL LQGLAFSGDS DVEEDNGPET QPAPKRPKGP ENSTTRP00000012545/1-808 AAGDITRKGR KKDKARVSEL LQGLAFSGDS DVEEDDEPET QPAPKRPKVS bmy_11230T0/1-802 AAGDITRKGR KKDKARVSEL LQGLTFSGDS DVEEDDEPET QPAPKRPKVS BACU007839/1-808 AAGDITRKGR KKDKARVSEL LQGLTFSGDS DVEEDDEPET QPAPKRPKVS 401 450 ENSP00000385213/1-809 CFPEKSWTKR DIKPNFPSWS ALDSGLLNLK SEKLNPVELF ELFFDDETFN ENSBTAP00000055834/1-798 GIPEKHWTKR DIKPSFPCWS ALDSGLLNLK SEKLNPVEFF ELFFDDETFN ENSTTRP00000012545/1-808 SVPEKNWTKR DIKPNFPSWS ALDSGLLNLK SEKLNPVELF ELFFDDETFN bmy_11230T0/1-802 SVPEKNWTKR DIKPNFPSWS ALDSGLLNLK SEKLNPVELF ELFFDDETFN BACU007839/1-808 SVPEKHWTKR DIKPNFPSWS ALDSGLLNLK SEKLNPVELF ELFFDDETFN 451 500 ENSP00000385213/1-809 LIVNETNNYA SQKNVSLEVT VQEMRCVFGV LLLSGFMRHP RREMYWEVSD ENSBTAP00000055834/1-798 LIVSETNNYA SQKNVNLEVT VQEVRCVFGV LLLSGLVRRP RRGMYWETSD ENSTTRP00000012545/1-808 LIVSETNNYA SQKNVNLEVT VQEMRCVLGV LLLSGLVRRP KRGMYWEMSD bmy_11230T0/1-802 LIVSETNNYA SQKNVNLEVT VQEMRCVLGV LLLSGLVRRP RRGMYWEMSD BACU007839/1-808 LIVSETNNYA SQKNVNLEVT VQEMRCVLGV LLLSGLVRRP RRGMYWEMSD 501 550 ENSP00000385213/1-809 TDQNLVRDAI RRDRFELIFS NLHFADNGHL DQKDKFTKLR PLIKQMNKNF ENSBTAP00000055834/1-798 ADQNLVRDAI RRDRFELIFS YLHFADNSHL DQNDKFTKLR PLIKQMNKNF ENSTTRP00000012545/1-808 ADQNLVRDSI RRDRFELIFS YLHFADNSHL DQNDKFTKLR PLIKQMNKNF bmy_11230T0/1-802 ADQNLVRDAI RRDRFELIFS YLHFADNSHL DQNDKFTKLR PLIKQMNKNF BACU007839/1-808 ADQNLVRDAI RRDRFELIFS YLHFADNSHL DQNDKFTKLR PLIKQMNKNF 551 600 ENSP00000385213/1-809 LLYAPLEEYY CFDKSMCECF DSDQFLNGKP IRIGYKIWCG TTTQGYLVWF ENSBTAP00000055834/1-798 LLYAPLEEYY CFDKTMCECF DSDQFLNGKS IRIGYKIWCG ATTEGYLVWF ENSTTRP00000012545/1-808 LLYAPLEEYY CFDKTMCECF DSDQFLNGKP IRIGYKVWCG TTAQGYLVWF bmy_11230T0/1-802 LLYAPLEEYY CFDKTMCECF DSDQFLNGKP IRIGYKVWCG TTTQGYLVWF BACU007839/1-808 LLYAPLEEYY CFDKTMCECF NSDQFLNGKP IRIGYKVWCG TTTQGYLVWF 601 650 ENSP00000385213/1-809 EPYQEESTMK VDEDPDLGLG GNLVMNFADV LLERGQYPYH LCFDSFFTSV ENSBTAP00000055834/1-798 EPHQEEATLM AGKDPDLGFG GNLVMNFADV LLARGQYPYH LCFDGFFTSV ENSTTRP00000012545/1-808 EPYQEESTVM AGKDLDLGLG GNLVMNFADV LLERGHYPYH LCFDSFFTSV bmy_11230T0/1-802 EPYQEESTMM AGKDLDLGLG GNLVMNFADV LLERGQYPYH LCFDSFFTSV BACU007839/1-808 EPYQEESTMM AGKDLDLGLG GNLVMNFADV LLERGQYPYH LCFDSFFTSV 651 700 ENSP00000385213/1-809 KLLSALKKKG VRATGTIREN RTEKCPLMNV EHMKKMKRGY FDFRIEENNE ENSBTAP00000055834/1-798 TLVSALKKKG VRATGTIRES RTEKCPLMSA EHMKTMKKGY CDFRVEENDE ENSTTRP00000012545/1-808 KLMSALKKKG VRATGTIREN RTEKCPLMSA EHMKKMQKGY FDFRVEENDE bmy_11230T0/1-802 KLMSALKKKG VRATGTIREN RTEKCPLMSA EHTKKMKKGY FDFRVEENDE BACU007839/1-808 KLMSALKKKG VRATGTIREN RTEKCPLMSA EHTKKMKKGY FDFRVEENDE 701 750 ENSP00000385213/1-809 IILCRWYGDG IISLCSNAVG IEPVNEVSCC DADNEEIPQI SQPSIVKVYD ENSBTAP00000055834/1-798 IILCRWHGDG IISLCSNAVG IEPVDEI-HC FASDKEIPQI SQPSIVKLYD ENSTTRP00000012545/1-808 IILCHWHGDG IISLCSNAVG IEPVNEI-CC FADDKEIPQI SQPSIVKLYD bmy_11230T0/1-802 IILCRWHGDS IISLCSNAVG IEPVNEI-RC FADDKEIPQI SQPSIVKLYD BACU007839/1-808 IILCRWHGDG IISLCSNAVG IEPVNEI-CC FADDKEIPQI SQPSIVKLYD 751 800 ENSP00000385213/1-809 ECKEGVAKMD QIISKYRVRI RSKKWYSILV SYMIDVAMNN AWQLHRACNP ENSBTAP00000055834/1-798 ECREGVAKME QITSKYRVRI RSKKWYSVLV SYMIDIAMSN AWQLHRACNP ENSTTRP00000012545/1-808 ECREGVAKME QIISKYRVRI RGKKWYSVLV SYMIDVAMSN AWHLHRACNP bmy_11230T0/1-802 ECREGVAKME QIISKYRVRI RGKKWYSVLV SYMIDVAMSN AWHLHRACNP BACU007839/1-808 ECREGVAKME QIISKYRVRI RGKKWYSVLV SYMIDVAMSN AWHLHRACNP 801 850 ENSP00000385213/1-809 GASLDPLDFR RFVAHFYLEH NAHLSD ENSBTAP00000055834/1-798 GASLDLGDFR RYVAHFYLEH NANMSD ENSTTRP00000012545/1-808 GASLELGDFR RDVAHFYLAH NANMSD bmy_11230T0/1-802 GASLELGDFR RDVAHFYLAH NANMSD BACU007839/1-808 GASLELGDFR RDVAHFYLAH NANMSD