KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:27 2014 Check: 00 .. Name: ENSP00000357660/1-226 Len: 245 Check: 3108 Weight: 1.00 Name: ENSBTAP00000055846/1-229 Len: 245 Check: 1087 Weight: 1.00 Name: ENSTTRP00000004584/1-229 Len: 245 Check: 5503 Weight: 1.00 Name: bmy_01368T0/1-245 Len: 245 Check: 6902 Weight: 1.00 Name: BACU004758/1-229 Len: 245 Check: 4339 Weight: 1.00 // 1 50 ENSP00000357660/1-226 MPTTKKTLMF LSSFFTSLGS FIVICSILGT QAWITSTIAV RDSASNGSIF ENSBTAP00000055846/1-229 MPTAKKTLTF LLSFVTSLGA FIVLCFVLAT QQWIRSTIAI SDSSSNGSVI ENSTTRP00000004584/1-229 MPTATKRLTF LTSFVTSLGA LIVVCSILTT QEWIRSTVVI SETSSNGSVI bmy_01368T0/1-245 MPTATKSLMF LSSFVTSLGA SIVICSILTT QEWIRSTVVI SDPSSNGSVI BACU004758/1-229 MPTATKSLMF LSSFVTSLGA SIVICSILTT QEWVRSTVGI SDTSSNGSVI 51 100 ENSP00000357660/1-226 ITYGLFRGES SEELSHGLAE PKKKFA---- ---------- --VLEILNNS ENSBTAP00000055846/1-229 ITYGLLRGKS IQELNHGLAE SDKNFE---- ---------- --VLGTLTNS ENSTTRP00000004584/1-229 ITYGLFRGKS IQELNHGLAE SDKNFE---- ---------- --VLGTLSSS bmy_01368T0/1-245 ITYGLFRGKS IQELNHGLAE SDKNFEELVF AFGATYLPNI ALVLGTLNNS BACU004758/1-229 ITYGLFRGKS IQELNHGLAE SDKNFE---- ---------- --VLGTLNNS 101 150 ENSP00000357660/1-226 SQKTLHSVTI LFLVLSLITS LLSSGFTFYN SISNPYQTFL GPTGVYTWNG ENSBTAP00000055846/1-229 SPKTLHSVVI VFLALGLFSS LLSAGFTFCN SVSNPYQTFL GPTGVYTWSG ENSTTRP00000004584/1-229 SPKTLHLVVI LFLVLSLFTS LLSSVFTFYN SFSNPYQTFL GPMGVYTWNG bmy_01368T0/1-245 SPKTLHLVVI LFLVLSLLTS LLSSGFTFYN GVSNPYQTFL GPMGVYTWSG BACU004758/1-229 SPKTLHLVVI LFLVLSLLTS LLSSGFTFYN TVSNPYQTFL GPMGVYTWSG 151 200 ENSP00000357660/1-226 LGASFVFVTM ILFVANTQSN QLSEELFQML Y---PATTSK GTTHSYGYSF ENSBTAP00000055846/1-229 LSASFTFITM VLFVGNTQSN RLSEELAQRL YPLYPAATQQ GTTHAYRYSF ENSTTRP00000004584/1-229 LSASFVFISM VLFVGNTQSN HLSEELAQRL YPLYPAVTHQ GTSHSYGYSF bmy_01368T0/1-245 LSASFIFITM VLFVGNTQSN HLSEELAQRL YPLYPAASHR GASHSYGYSF BACU004758/1-229 LSASFIFITM VLFVGNTQSN HLSEELAQRL YPLYPAATHR GASHSYGYSF 201 250 ENSP00000357660/1-226 WLILLVILLN IVTVTIIIFY QKARYQRKQE QRKPMEYAPR DGILF ENSBTAP00000055846/1-229 WLTLLVILLN VVTTVIIIFY QKARYQRKQE QRKPMESAPR DGILF ENSTTRP00000004584/1-229 WLTLLVILLN VVTAVIIAFF QKARKQWKQE QKKPMEYAPR DGILF bmy_01368T0/1-245 WLSLLVILLN MVTVVIIIFY QKARHQRKQE QKKPMEYAPR DGILF BACU004758/1-229 WLSLLVILLN VVTVVVIIFY QKARHQRKQE QKKPMEYAPR DGILF