KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:28 2014 Check: 00 .. Name: bmy_02069T0/1-452 Len: 554 Check: 6855 Weight: 1.00 Name: BACU002247/1-365 Len: 554 Check: 9128 Weight: 1.00 Name: ENSTTRP00000001776/1-385 Len: 554 Check: 736 Weight: 1.00 Name: ENSBTAP00000055855/1-524 Len: 554 Check: 1079 Weight: 1.00 // 1 50 bmy_02069T0/1-452 MLGVLFGSIR FNSLSLSLFF FY-------- ---------- ---------- BACU002247/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001776/1-385 LEEEAMNGDR TESDWQGLVS EYLVCKRKLE SKKEALLILS KELDTCQQER ENSBTAP00000055855/1-524 -----MNGDR TESDWQGLVS EYLVCKRKLE SKKEALLILS KELDTCQQER 51 100 bmy_02069T0/1-452 ---------- ---------- ---------- ---------- ---------- BACU002247/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001776/1-385 DQYKLMANQL RERHQSLKKK YRELIDGDPS LPPEKRKQXX XAQLLRDSQD ENSBTAP00000055855/1-524 DQYKLMANQL RERHQSLKKK YRELIDGDPS LPPEKRKQAN LAQLLRDSQD 101 150 bmy_02069T0/1-452 ---------- ---------Q WKMQLLRMTI AKQRLGDEEI GVRHFAAHER BACU002247/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001776/1-385 RNKRLGEEIK ELQQRLGEVQ GDNKLLRMTI AKQRLGDEEI GVRHFAAHER ENSBTAP00000055855/1-524 RNKHLGEEIK ELQQRLGEVQ GDNKLLRMTI AKQRLGDEEI GVRHFAAHER 151 200 bmy_02069T0/1-452 EDLVQQLERA KEQIESLEHD LQASMDELQD VKEERSSYQD KVERLNQELN BACU002247/1-365 ---------- ---------- ----MDELQD VKEERASYQD KVERLNQELN ENSTTRP00000001776/1-385 EDLVQQLERA REQIESLEHD LQASMDELQD VKEERSSYQD KVERLNQELN ENSBTAP00000055855/1-524 EDLVQQLERA KEQIESLEHD LQASVDELQD VKEERSSYQD KVERLNQELN 201 250 bmy_02069T0/1-452 HILSGHENRI IDVDALCMEN RQVTSPRPAL GYLQERLKQL HEEVNLLKSN BACU002247/1-365 HILSGHENRI IDVDALCMEN R--------- -YLQERLKQL HEEVNLLKSN ENSTTRP00000001776/1-385 HILSGHENRI IDVDALCMEN R--------- -YLQERLKQL HEEVNLLKSN ENSBTAP00000055855/1-524 HILSGHENRI IDVDALCMEN R--------- -YLQERLKQL HEEVNLLKSN 251 300 bmy_02069T0/1-452 IAKYKNALER RKNSKGQGKS SSSALTGVLS AKQVQDLLSE DHGCSLPATP BACU002247/1-365 IAKYKNALER RKNSKGQGKS SSSALTGVLS AKQVQDLLSE DHGCSLPATP ENSTTRP00000001776/1-385 IAKYKNALER RKNSKGQGKS SSSALTGVLS AKQVQ-LLSE DHGCSLPATP ENSBTAP00000055855/1-524 IAKYKNALER RKNSKGQNKS SSSALTGVLS AKQVQDLLSE DHGCSLPATP 301 350 bmy_02069T0/1-452 QSISDLKSLA TALLETIHEK NMVIQHQRQT NKILGNRVAE LEKKLRTLEV BACU002247/1-365 QSISDLKSLA TALLETIHEK NMVIQHQRQT NKILGNRVAE LEKKLRTLEV ENSTTRP00000001776/1-385 QSISDLKSLA TALLXXXXXX XXXXXXXXXX XXILGNRVAE LEKKLRTLEV ENSBTAP00000055855/1-524 QSISDLKSLA TALLETIHEK NMVIQHQRQT NKILGNRVAE LEKKLRTLEV 351 400 bmy_02069T0/1-452 SGLWSLPGLS YNVSVGFGRG KDTILFGDPA LPTTQRSRSP LLKFVEQLAE BACU002247/1-365 SGLWSLPGLS YNVSVGFGRG KDTILFGDPA LPTTQRSRSP LLKFVEQLAE ENSTTRP00000001776/1-385 SGLWSLPG-- ---------G KDTILFGDPA LPTTQRSRSP LLKFVEQLTE ENSBTAP00000055855/1-524 SGLWSLPG-- ---------G KDTILFSDPA LPTMQRSRSP LLKFVEQPSE 401 450 bmy_02069T0/1-452 NKASPKDGEA QKQERDESRA AAEALTVRED AGRPGVSSPA NQSHRSQRKH BACU002247/1-365 NKASPKDGAA QKQERDESRA AAEALTVRED AGKPAVSSPA NQSHRSQREH ENSTTRP00000001776/1-385 NKASPKD--- ---------- ---------- ---------- ---------- ENSBTAP00000055855/1-524 NKASPKHGEA QKQ--DESCA APEALAVRED AGRLAVSSPA SQSHRNQTKP 451 500 bmy_02069T0/1-452 FHPSLPQLPS EEEEVNRLGR EIVKPTEEQA AAKPEGVTRE SPVESRRDEM BACU002247/1-365 FHPSLPQLPS EEEEVNRLGR EIVKPTEEQA AAKPEGVTRE SPVESRRDEM ENSTTRP00000001776/1-385 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055855/1-524 FHPSLLQIPS EEEEVNRLGR ETVKLTEEQA AAGPEGVRRE SPVEGQREEM 501 550 bmy_02069T0/1-452 GPSPPGVAAN GSFPKPCPDS AESSQPAAEA PTLEDGKERP QRVEVGGTP- BACU002247/1-365 GPSPPGLAAS GSCPKPCPDS TESSQPAAEA PTLEDGKERP QRVEVGGTP- ENSTTRP00000001776/1-385 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055855/1-524 GPSPPGLTAD GPCPKTCRDS SESSQPEAKV STLEDDKDTA E--GGGGTRS 551 600 bmy_02069T0/1-452 ---- BACU002247/1-365 ---- ENSTTRP00000001776/1-385 ---- ENSBTAP00000055855/1-524 TVKT