KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:29 2014 Check: 00 .. Name: ENSP00000253754/1-330 Len: 353 Check: 4219 Weight: 1.00 Name: bmy_08344T0/1-245 Len: 353 Check: 3176 Weight: 1.00 Name: ENSBTAP00000055868/1-353 Len: 353 Check: 5630 Weight: 1.00 Name: BACU013066/1-331 Len: 353 Check: 7888 Weight: 1.00 Name: ENSTTRP00000002728/1-331 Len: 353 Check: 7718 Weight: 1.00 // 1 50 ENSP00000253754/1-330 MPHSVTLRGP SPWGFRLVGG RDFSAPLTIS R---VHAGSK AALAALCPGD bmy_08344T0/1-245 MPHSVTLRGP SPWGFRLVGG RDFSVPLTIS R---VHAGSK AALAALCPGD ENSBTAP00000055868/1-353 MPHSVTLRGP SPWGFRLVGG RDFSVPLTIS RQSCVTPESK AALAALCPGD BACU013066/1-331 MPHSVTLRGP SPWGFRLVGG RDFSVPLTIS R---VHAGSK AALAALCPGD ENSTTRP00000002728/1-331 MPHSVTLRGP SPWGFRLVGG RDFSVPLTIS R---VHAGSK AALAALCPGD 51 100 ENSP00000253754/1-330 LIQAINGEST ELMTHLEAQN RIKGCHDHLT LSVSRPEGRS WPSAPDDSKA bmy_08344T0/1-245 LIQAINGEST ELMTHLEAQN RIKGCHDHLT LSVSR----- ---MKSEVKA ENSBTAP00000055868/1-353 LIQAINGEST ELMTHLEAQN RIKGCRDHLT LSVSRPEGRS WPSTPEDNKA BACU013066/1-331 LIQAINGEST ELMTHLEAQN RIKGCHDHLT LSVSRPEGRS WPNTPEDSKA ENSTTRP00000002728/1-331 LIQAINGEST ELMTHLEAQN RIKGCHDHLI LSVSRPEGRS WPNTPEDSKA 101 150 ENSP00000253754/1-330 QAHRIHIDPE IQ-------- ---------- -DGSPTTSRR PSGTGTGPED bmy_08344T0/1-245 QLPR------ ---------- ---------- ---------- ---------- ENSBTAP00000055868/1-353 QAHRIHIDSE AQEQQGNPLA AAPILYLKGH EDGSPLTSRR PSATGLGPED BACU013066/1-331 QAHRIHIDPE AQ-------- ---------- -DGSPATSRW PSATGLGPED ENSTTRP00000002728/1-331 QAHRIHIDPE AQ-------- ---------- -DGSPATSRW PSATGLGPED 151 200 ENSP00000253754/1-330 GRPSLGSPYG QPPRFPVPHN GS-SEATLPA QMSTLHVSPP PSADPARGLP bmy_08344T0/1-245 --------YA YSVRNSEP-- ---------- ---------- ---------- ENSBTAP00000055868/1-353 GRPGLGSPYG QSPRLPVPHN GSNSEATLLA QMGALHVSPP HSTDPARGLP BACU013066/1-331 GRPGLGSPYG QSPRLPVPHN GSSSEATLLA QMGTLHVSPP HSTDLARGLS ENSTTRP00000002728/1-331 GRPGLGSPYG QSPRLPVPHN GSSSEATLLA QLGTLHVSPP HSTDLARGLS 201 250 ENSP00000253754/1-330 RSRDCRVDLG SEVYRMLREP AEPVAAEPKQ SGSFRYLQGM LEAGEGGDWP bmy_08344T0/1-245 ---------- -EVYRMLRES AEPTAAEPKQ SGSFRYLQGM LEAGEGGERP ENSBTAP00000055868/1-353 RSRDCGVDLG SEVYRMLREP AEPAAAEPKQ SGSFRYLQGM LEAGEGGERP BACU013066/1-331 RSRDCGVDLG SEVYRMLRES AEPTAAEPKQ SGSFRYLQGM LEAGEGGERP ENSTTRP00000002728/1-331 RSRDCGVDLG SEVYRMLRES AEPTAAEPKQ SGSFRYLQGM LEAGEGGERP 251 300 ENSP00000253754/1-330 GPGGPRNLKP TASKLGAPLS GLQGLPECTR CGHGIVGTIV KARDKLYHPE bmy_08344T0/1-245 GPGGPRNLKP TAGKLGAPLS GLQGLPECTR CGHGIVGTIV KARDKLYHPE ENSBTAP00000055868/1-353 GPGGPRNLKP TASKLGAPLS GLQGLPECTR CGHGIVGTIV KARDKLYHPE BACU013066/1-331 GPGGPRNLKP TAGKLGAPLS GLQGLPECTR CGHGIVGTIV KARDKLYHPE ENSTTRP00000002728/1-331 GPGGPRNLKP TAGKLGAPLS GLQGLPECTR CGHGIVGTIV KARDKLYHPE 301 350 ENSP00000253754/1-330 CFMCSDCGLN LKQRGYFFLD ERLYCESHAK ARVKPPEGYD VVAVYPNAKV bmy_08344T0/1-245 CFMCSDCGLN LKQRGYFFLD DRLYCESHAK ARVKPPEGYD VVAVYPNAKV ENSBTAP00000055868/1-353 CFMCSDCGLN LKQRGYFFLD ERLYCESHAK ARVKPPEGYD VVAVYPNAKV BACU013066/1-331 CFMCSDCGLN LKQRGYFFLD DRLYCESHAK ARVKPPEGYD VVAVYPNAKV ENSTTRP00000002728/1-331 CFMCSDCGLN LKQRGYFFLD DRLYCESHAK ERVKPPEGYD VVAVYPNAKV 351 400 ENSP00000253754/1-330 ELV bmy_08344T0/1-245 ELV ENSBTAP00000055868/1-353 ELV BACU013066/1-331 ELV ENSTTRP00000002728/1-331 ELV