KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:27:35 2014  Check: 00 ..

 Name: ENSBTAP00000055926/1-162  Len:    219  Check:  6540  Weight:  1.00
 Name: bmy_02432T0/1-198         Len:    219  Check:  9357  Weight:  1.00
 Name: BACU019405/1-117          Len:    219  Check:  2633  Weight:  1.00
 Name: ENSTTRP00000007715/1-128  Len:    219  Check:  9258  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000055926/1-162  ---------- ---------- ---------- ------SSFQ QRLSYTTLSD 
bmy_02432T0/1-198         MERYSGALEE AVDGARQQER HYQLLSALQG LVKELPSSFQ QRLSYTTLSD 
BACU019405/1-117          ---------- ---------- ---------- ---------- ---------- 
ENSTTRP00000007715/1-128  ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSBTAP00000055926/1-162  LALALLDGTV FEIVQGLLEI QHLTEKSLYN QRLRLQNEHR VLRQALRQKH 
bmy_02432T0/1-198         LALALLDGTV FEIVQGLLDI QHLTEKSLYN QRLRLQNEHR VLRQALRQKH 
BACU019405/1-117          ---------- ---------- ---------- -MPLWSCPRP VLRQALRQKH 
ENSTTRP00000007715/1-128  ---------- ---------- ---------- ---------- -LRQALRQKH 


                          101                                                150
ENSBTAP00000055926/1-162  QEAQQACRPH NLPVLQAAQQ RELEAVEHRI REEQRAMDQK IVLELDRKVA 
bmy_02432T0/1-198         QEAQQACRPH NLPVLQAAQQ RELEAVEHRI REEQRAMDQK IVLELDRKVA 
BACU019405/1-117          QEAQQACRPH NLPVLQAAQQ RELEAVEHRI REEQRAMDQK IVLELDRKVA 
ENSTTRP00000007715/1-128  QEAQQACRPH NLPVLQAAQQ RELEAVEHRI REEQRAMDQK IVLELDRKVA 


                          151                                                200
ENSBTAP00000055926/1-162  DQQSTLEKAG VAGFYVTTNP QELTLQMNLL ELIRKLQQRG RQAGKVAL-- 
bmy_02432T0/1-198         DQQSTLEKAG VAGFYVTTNX QELTLQMNLL ELIRKLQQRG CQVGKAAL-- 
BACU019405/1-117          DQQSTLEKAG VAGFYVTTNP QELTLQMNLL ELIRKLQQRG CQVGKAAL-- 
ENSTTRP00000007715/1-128  DQQSTLEKAG VAGFYVTTNP QELTLQMNLL ELIRKLQQRG CQVGKAALPG 


                          201                                                250
ENSBTAP00000055926/1-162  ---------- --------- 
bmy_02432T0/1-198         ---------- --------- 
BACU019405/1-117          ---------- --------- 
ENSTTRP00000007715/1-128  GSCQPAAHLG WEDNPVPQS