KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:41 2014 Check: 00 .. Name: ENSTTRP00000013386/1-214 Len: 264 Check: 35 Weight: 1.00 Name: ENSP00000397900/1-262 Len: 264 Check: 4051 Weight: 1.00 Name: ENSBTAP00000055968/1-248 Len: 264 Check: 1836 Weight: 1.00 Name: bmy_09618T0/1-248 Len: 264 Check: 2089 Weight: 1.00 Name: BACU017668/1-248 Len: 264 Check: 1452 Weight: 1.00 // 1 50 ENSTTRP00000013386/1-214 ---------- ---------- ---------- ---------- ---------V ENSP00000397900/1-262 MAWGSKGIQG WENLAESSHL ATTRESSPPE SGTGSGSSRG SRLQE--PQV ENSBTAP00000055968/1-248 MDQTPRRMLG ---------- ------QPLS SPATQPKKRS TSVMSFFSKV bmy_09618T0/1-248 MDQTQRRMLD ---------- ------QXLS IPTAQPKKKR TSVISFFSKV BACU017668/1-248 MDQTQRRMLD ---------- ------QPLS IPTAQPKKKR TSVISFFSKV 51 100 ENSTTRP00000013386/1-214 SWKLRLQKQE PL-NVSFNLA ERACDPSFKK RHMAMRSLGT MACETPDKVR ENSP00000397900/1-262 SWKLRFQKRE PLKNVFFILA ERARDPSAKK RHMAMRNLGT MAYEAPDKVR ENSBTAP00000055968/1-248 SWNLRLQKQE PLKNVFFILA ETARDPSVKK RHMVMRGLGT MACETPDKVR bmy_09618T0/1-248 SWKLRLQKQE PLKNVFFNLA ERAWDPSVKX RHMAMRSLGT MACETPDKVR BACU017668/1-248 SWKLRLQKQE PLKNVFFNLA ERAWDPSVKK HHMAMRSLGT MACETPDKVR 101 150 ENSTTRP00000013386/1-214 KYKMIVLDLL VHGRYDPMSS EVIHESLKTL TVMLGRIQGK GFGSFFIDIT ENSP00000397900/1-262 KYKKIVLDLL VYGLYDPVNL EVIHESMKTL TVVLGKIQGK GLGSFFIDIT ENSBTAP00000055968/1-248 KYKKIILDLL VHGLYDPVSS EVIHESMKTL TIILGKMQGK ALGSFFIDIT bmy_09618T0/1-248 KYKMIVLDLL VHGLYDPVSS EVIHESLKTL TIILGKIQGK GLGFFFIDIT BACU017668/1-248 KYKMIVLDLL VHGLYDPVSS EVIHESLKTL TIILGKIQGK GLGSFFIDIT 151 200 ENSTTRP00000013386/1-214 LRTRTLLDDX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000397900/1-262 LQTRTLLDDE NDSLRYSAFV LFGQLAAFAG RKWKKFFTSQ VKQTRDSLLI ENSBTAP00000055968/1-248 LQTRTLLDDE NDSLRYSAFV LFGQLADLAG RKWKSFFTRQ VKQTQDSLLT bmy_09618T0/1-248 LXTRTLLDDE NDSLRYSAFV LFGQLAAFAG RKWKRFFTRQ VKQTQDSLLT BACU017668/1-248 LRTRTLLDDE NDSLRYSAFV LFGQLAAFAG RKWKRFFTRQ VKQTQDSLLT 201 250 ENSTTRP00000013386/1-214 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXSHY ENSP00000397900/1-262 HLQDRNPQVA KACKTTFQAC SPYLKLKEEY SFQSEEDQRN TKLYQQLSHY ENSBTAP00000055968/1-248 HLQDRNPQVA KACKTTFRAC SPYLRQSKDY SFQNEEDQRN PKLCRQLSHY bmy_09618T0/1-248 HLQDRNPQVA KACKTTFRAC SPYLRQRKNY SFQSEEDQRN PKLCRQLSHY BACU017668/1-248 HLQDRNPQVA KACKTTFRAC SPYLRQRKDY SFQSEEDQRN PKLCRQLSHY 251 300 ENSTTRP00000013386/1-214 HPELLQFFYA NKIL ENSP00000397900/1-262 HPEILQFFYA NKIL ENSBTAP00000055968/1-248 HPELLQFFYA NKIL bmy_09618T0/1-248 HPELLQFFYA NKIL BACU017668/1-248 HPELLQFFYA NKIL