KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:42 2014 Check: 00 .. Name: ENSP00000251642/1-678 Len: 681 Check: 566 Weight: 1.00 Name: ENSBTAP00000055976/1-680 Len: 681 Check: 941 Weight: 1.00 Name: ENSTTRP00000006295/1-679 Len: 681 Check: 9830 Weight: 1.00 Name: bmy_16691T0/1-450 Len: 681 Check: 449 Weight: 1.00 Name: BACU007156/1-681 Len: 681 Check: 6372 Weight: 1.00 // 1 50 ENSP00000251642/1-678 MELRSYQWEV IMPALEGKNI IIWLPTGAGK TRAAAYVAKR HLETVDGAKV ENSBTAP00000055976/1-680 MELRPYQWEV IMPALEGKNI IIWLPTGSGK TRAAAYVARR HLETVDGAKV ENSTTRP00000006295/1-679 MELRPYQWEV IMPALEGKNI IIWLPTGSGK TRAAAYLAKR HLETVDGAKV bmy_16691T0/1-450 ---------- ---------- ---------- ---------- ---------- BACU007156/1-681 MELRPYQWEV IMPALEGKNI IIWLPTGSGK TRAAAYLAKR HLETVDGAKV 51 100 ENSP00000251642/1-678 VVLVNRVHLV TQHGEEFRRM LDGRWTVTTL SGDMGPRAGF GHLARCHDLL ENSBTAP00000055976/1-680 VVLVNRVHLV TQHCEEFSRM LERRWTITTL SGDMGPRAGF GHVARRHDLL ENSTTRP00000006295/1-679 VVLVNRVHLV TQHCEEFSRM LGERWTITTL SGDMGPRAGF GHVAQRHDLL bmy_16691T0/1-450 ---------- ---------- ---------- ---------- ---------- BACU007156/1-681 VVLVNRVHLV TQHCEEFSSM LGRRWTITTL SGDMGPRAGF GHVARRHDLL 101 150 ENSP00000251642/1-678 ICTAELLQMA LTSPEEEEHV ELTVFSLIVV DECHHTHKDT VYNVIMSQYL ENSBTAP00000055976/1-680 ICTAELLQKA LASPEEEEHV ELNAFSLLVV DECHHTHKDT VYNIILSQYL ENSTTRP00000006295/1-679 ICTAELLQKA LTSLEEGEHV ELNAFSLLVV DECHHTHKDT VYNVILSRYL bmy_16691T0/1-450 ---------- ---------- ---------- ---------- ---------- BACU007156/1-681 ICTAELLQKA LTSLEEEEHV ELNAFSLLVV DECHHTHKDT VYNVILSRYL 151 200 ENSP00000251642/1-678 ELKLQRAQPL PQVLGLTASP GTGGASKLDG AINHVLQLCA NLDTWCIMSP ENSBTAP00000055976/1-680 ELKLQRTRPL PQVLGLTASP GTGGVSTLEG AIDHVLQLCA NLDTWCIMSP ENSTTRP00000006295/1-679 ELKLRRTQPL PQVLGLTASP GTGGASTLNG AIDHVLQLCA NLDTWRIMSS bmy_16691T0/1-450 ---------- ---------- ---------- ---------- ---------- BACU007156/1-681 ELKFQRTRPL PQVLGLTASP GTGGASTLDG AIDHVLQLCA NLDTWCIMSP 201 250 ENSP00000251642/1-678 QNCCPQLQEH SQQPCKQYNL CHRRSQDPFG DLLKKLMDQI HDHLEMPELS ENSBTAP00000055976/1-680 KDHSPQLQEH SHQPCKQYDL CHRRTQDPFG DMLKKLMDQI HDHLEMPKLR ENSTTRP00000006295/1-679 RDYRSQLQ-H SGQPCKQYDL CHRRTQDPFG DMLKELMDQI HDHLEMPELR bmy_16691T0/1-450 ---------- ---------- ---------- -MLKELMDQI HDQLEMPELG BACU007156/1-681 QDYRSQLQEH SRQPCKQYDL CHRRTQEPFG DMLKELMDQI HDHLEMPELR 251 300 ENSP00000251642/1-678 RKFGTQMYEQ QVVKLSEAAA LAGLQEQRVY ALHLRRYNDA LLIHDTVRAV ENSBTAP00000055976/1-680 RDFGTQTYEQ QVVELSQDAA EAGLLEQRVY ALHLRRYNDA LLIHDTVRAV ENSTTRP00000006295/1-679 RDFGTQTYEQ QVVELSRDAA EAGLQERRVY ALHLRRYNDA LLIHDTVRAV bmy_16691T0/1-450 RDFGTQAYEL RVVELSRDAA EAGLQERRVY ALHLRRYNDA LLIHDTVRAV BACU007156/1-681 RDFGTQTYEQ QVVELSRDAA EAGLQEQRVY ALHLRRYNDA LLIHDTVRAV 301 350 ENSP00000251642/1-678 DALAALQDFY HREHVTKTQI LCAERRLLAL FDDRKNELAH LATHGPENPK ENSBTAP00000055976/1-680 DALNTLRDFY NRERTTKTQI LHAERWLLAL FDDHKNELAR LATSGPENPK ENSTTRP00000006295/1-679 DALATLQDFY DRERTTKTQI LRAERWLLAL FDDHKNKLAH LATRGPENPK bmy_16691T0/1-450 DALATLQDFY DRERTTKTQI LRAERWLLAL FDDHKNELAH LATHGPENPK BACU007156/1-681 DALATLQDFY DRERTTKTQI LHAERWLLAL FDDHKNELAH LATRGPENPK 351 400 ENSP00000251642/1-678 LEMLEKILQR QFSSSNSPRG IIFTRTRQSA HSLLLWLQQQ QGLQTVDIRA ENSBTAP00000055976/1-680 LEVLEAILQR QFRSPDSPRG IIFTRTRQSA HSLLLWLQQQ PGLQTVDIRP ENSTTRP00000006295/1-679 LEVLEEILQK QFSSPDSPQG IIFTRTRQSA HSLLLWLQQQ PGLQTVAIRP bmy_16691T0/1-450 LAVLEEILQK QFRGPDSPRG IIFTRTRQSA HSLLLWVQQQ PGLQTVDIRP BACU007156/1-681 LAMLEEILQK QFRSPDSPRG IIFTRTRQSA HSLLLWVQQQ PGLQTVDIRP 401 450 ENSP00000251642/1-678 QLLIGAGNSS QSTH---MTQ RDQQEVIQKF QDGTLNLLVA TSVAEEGLDI ENSBTAP00000055976/1-680 QVLTGAGNNS QKTQMIQMTQ RDQQEVIQKF RTGTLNLLVA TSVAEEGLDI ENSTTRP00000006295/1-679 QLLIGAGNSS QSAQMIPMTQ RDQQEVIQKF RTGTLNLLVA TSVAEEGLDI bmy_16691T0/1-450 QLLIGAGNSS QSTQMIQMTQ RDQQEVIRKF RTGTLNLLVA TSVAEEGLDI BACU007156/1-681 QLLIGAGNSS QSAQMIQMTQ RDQQEVIQKF RTGTLNLLVA TSVAEEGLDI 451 500 ENSP00000251642/1-678 PHCNVVVRYG LLTNEISMVQ ARGRARADQS VYAFVATEGS RELKRELINE ENSBTAP00000055976/1-680 PQCNVVVRYG LLTNEISMVQ ARGRARASQS VYSFVAAQGS RELQRELTNE ENSTTRP00000006295/1-679 PQCKVVVRYG LLTNEISMVQ ARGRARASQS VYSFVAAQGS RELKRELTNE bmy_16691T0/1-450 PQCNVVVRYG LLTNEISMVQ ARGRARASQS VYSFVAAQGS RELKRELTNE BACU007156/1-681 PQCNVVVRYG LLTNEISMVQ ARGRARASQS VYSFVAAQGS RELKRELTNE 501 550 ENSP00000251642/1-678 ALETLMEQAV AAVQKMDQAE YQAKIRDLQQ AALTKRAAQA AQRENQRQQF ENSBTAP00000055976/1-680 ALETLMKRAV AAVQAMDQAK YQAKIRDLQR AALVKRAVQA AQRESRQRKF ENSTTRP00000006295/1-679 ALETLMERAV AAVQEMDRAK YQDKIQALQR AALVKRAAQA AQRESHQHKF bmy_16691T0/1-450 ALEALMERAV AAVQEMDQAK YQDKIQDLQR AALVKRAAQA AQRESHQHKF BACU007156/1-681 ALETLMERAV AAVQEMDQAK YQDRIQDLQR AALVKRAAQA AQRESHQHKF 551 600 ENSP00000251642/1-678 PVEHVQLLCI NCMVAVGHGS DLRKVEGTHH VNVNPNFSNY YNVSRDPVVI ENSBTAP00000055976/1-680 LAEQVQLLCI NCMVSVGYGS DLRKVEGTHH VNVNPNFSIY YNISKQPVDI ENSTTRP00000006295/1-679 LAEHVRLLCV NCTVPVGYGS DLRRVEGTHH VNVNPNFLIY YNVSQEPVVI bmy_16691T0/1-450 LAEHVRLLCV NCMVPVGYGS DLRRVEGTHH VNVNPNFSIY YNISHEPVVI BACU007156/1-681 LAEHVRLLCV NCTVPVGYGS DLRRVEGTHH VNVNPNFSIY YTISHEPVVI 601 650 ENSP00000251642/1-678 NKVFKDWKPG GVISCRNCGE VWGLQMIYKS VKLPVLKVRS MLLETPQGRI ENSBTAP00000055976/1-680 NRSFKDWRPG GAISCRNCGE AWGLQIIYKS VKLPVLKVGS MLLETPQGRV ENSTTRP00000006295/1-679 NRVFKDWRPG GVISCRNCGE G-GLQMNYKS VKLPVLKVRS LLLETPQGRV bmy_16691T0/1-450 NRVFKDWRPG GVISCRNCGE GWGLQMIYKS VKLPVLKVRS LLLETPQGRV BACU007156/1-681 NRVFKDWRPG GVISCRNCGE GWGLQMIYKS VKLPVLKVRS LLLETPQGRV 651 700 ENSP00000251642/1-678 QAKKWSRVPF SVPDFDFLQH CAENLSDLSL D ENSBTAP00000055976/1-680 RAKKWSRVPF TVPDFDYVQY -AEGLAGLSL D ENSTTRP00000006295/1-679 QSKKWSRVPF TVPDFDYVQH CAQSLADFSL D bmy_16691T0/1-450 QSKKWSRVPF TVPDFDYVQH CAQSLAHFSL D BACU007156/1-681 QSKKWSRVPF TVPDFDYVQH CAQSLADFSL D