KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:44 2014 Check: 00 .. Name: ENSP00000360165/1-376 Len: 377 Check: 1991 Weight: 1.00 Name: ENSTTRP00000007062/1-367 Len: 377 Check: 3037 Weight: 1.00 Name: ENSBTAP00000055994/1-377 Len: 377 Check: 4696 Weight: 1.00 Name: bmy_21833T0/1-348 Len: 377 Check: 2888 Weight: 1.00 Name: BACU010587/1-332 Len: 377 Check: 7877 Weight: 1.00 // 1 50 ENSP00000360165/1-376 MFNPHALDVP AVIFDNGSGL CKAGLSGEIG PRHVISSVLG HCKFNVPLAR ENSTTRP00000007062/1-367 MFKPYALDTP AVIFANGSGL CKVGMSGEAG PHHVIISVMG HPKFNMALPE ENSBTAP00000055994/1-377 MFNPYSLDTP AVIFDNGSGL CKVGMSGEIG PRHVISSVVG HPKFNMALPE bmy_21833T0/1-348 ---------- ---------- ----MSGETG PRHVISSVMG HPKFNMALPE BACU010587/1-332 MFNPYALDTP AVIFDSGSGL CKVGMSGETG PRHVISSVMG HPKFNMALPE 51 100 ENSP00000360165/1-376 LNQK-YFVGQ EALYKYEALH LHYPIERGLV TGWDDMEKLW KHLFERELGV ENSTTRP00000007062/1-367 AN-KNYTVGG KALFKYGALH LHYPIEHGLV TRWNDM-KLW KYLF-WELGV ENSBTAP00000055994/1-377 ANQKNYVVGE NALFKYEALQ LYYPIERGLV TRWDDMEKLW KYLFEWELGV bmy_21833T0/1-348 XNQKNYTVGE KALFKYGALH LHYPIERGLV TRWDDMEKLW KYLFEWELGV BACU010587/1-332 ANRKNYTVGE KALFKYGPLH LHYPIERGLV TRWDDMEKLW KYLFEWELGV 101 150 ENSP00000360165/1-376 KPSQQPVLMT EPSLNPREIR EKLAEMMFET FSVPGFYLSN HAVAALYASA ENSTTRP00000007062/1-367 KPCRQPVLMT EPSLKPRETR EKTAEVTFET FSVPAFYLSN YVVVALYTCA ENSBTAP00000055994/1-377 KPCQRPVLMT EPSLNPRETR EKTTEVMFET FNVPAFYLSN HAVVALYASA bmy_21833T0/1-348 KPCRQPVLMT EPSLNPRETQ ENTAKVMFET FSVPAFYLSN HAVVALYTSA BACU010587/1-332 KPCRQPVLMT EPSLNPRDTR EKTAKVMFET FSVPAFYLSN HAVVALYTSA 151 200 ENSP00000360165/1-376 CVTGLVVDSG DGVTCTVPIF EGYSLPHAVT KLCMAGRDIT EHLTRLLFAS ENSTTRP00000007062/1-367 SVTGLVVDSG NGITCTVPIF EGYSLPHAIT KLYVAERDIT EHLTRLL-AS ENSBTAP00000055994/1-377 AVTGLVVDSG DGITCTVPIF EGYSLPHAVT KLYVAGRDIT EHLTRLLLAS bmy_21833T0/1-348 SVTGLVVDSG NGITCTVPIF EGYSLPHAIT KLYVAGRDIT EHLTRLLLAS BACU010587/1-332 SVTGF---SG G--------- ---------- ---------- --------QR 201 250 ENSP00000360165/1-376 GFNFPCILNK AVVNNIKEKL CYIALEPEKE LRKSRGEVLG AYRLPDGHVI ENSTTRP00000007062/1-367 GCNYPCILNK ALVDDIKETL CYVALEPETL HSQR---VLR -YKLPDGNVI ENSBTAP00000055994/1-377 GCNYPCILNK ALVDDIKETL CYVALEPEKE LCKKPEEIMK EYKLPDGNVI bmy_21833T0/1-348 GCNYPCILNK ALVDDIKEML CYVALEPEKE LFKKPEEVLR EYRLPDGNVV BACU010587/1-332 GCNYPCILNK ALVDDIKEML CYVALEPEKE LCKKPEEVLR EYKLPDGNVV 251 300 ENSP00000360165/1-376 HFGDELYQVP EVLFAPDQLG IHSPGLSKMV SSSIMKCDTD IQNKLYADIV ENSTTRP00000007062/1-367 HLGDQLYQVP XXXXXXXXXX XXXXXXXKMV SSSIMKCDTN IQKNLLEEIV ENSBTAP00000055994/1-377 HLGDQLYQVP EILFAPDHLG VHNPGLSKMV SSSIMKCDTD IQKNLFAEIV bmy_21833T0/1-348 HLGDQLYQVP EILFAPDQLG VHNPGLSKMV SSSIMKCDTD IQKNLFVEIV BACU010587/1-332 HLGDQLYQVP EILFAPDQLG VHSPELSKMV SSSIMKCDTN IQKNLFAEIV 301 350 ENSP00000360165/1-376 LSGGTTLLPG LEERLMKEVE QLASKGTPIK ITASPDRCFS AWIGASIMTS ENSTTRP00000007062/1-367 LSGG-TLFPG LEKRFMKELE QLAFRGTPIK ITASRDGCFS EWISASIVTS ENSBTAP00000055994/1-377 LSGGTTLFPG LEERLMKELE QLAFRGTPIK ITASPDRCFS AWIGASIVTS bmy_21833T0/1-348 LSGGTTLFPG LEKRLMKELE QLAFRGTPIK ITASPDGCFS EWLGASIVTS BACU010587/1-332 LSGGTTLFPG LEKRLMKELE QLAFRGTPIK ITASPDGCFS EWLGASIVTS 351 400 ENSP00000360165/1-376 MSSFKQMWVT SADFKEYGTS VVQRRCF ENSTTRP00000007062/1-367 LSSFRQMLVT SEDFMELGTY VF-RRCF ENSBTAP00000055994/1-377 LSSFKQMWIT SADFMEFGAC VVQRRCF bmy_21833T0/1-348 LSSFKQMWIT SVDFMEFGTY VV----- BACU010587/1-332 LSSFKQMWIT SADFMEFGTY VA-----