KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:45 2014 Check: 00 .. Name: ENSBTAP00000056004/1-448 Len: 500 Check: 3604 Weight: 1.00 Name: ENSP00000420267/1-480 Len: 500 Check: 1828 Weight: 1.00 Name: ENSTTRP00000016482/1-446 Len: 500 Check: 4078 Weight: 1.00 Name: bmy_04626T0/1-429 Len: 500 Check: 1876 Weight: 1.00 Name: BACU016293/1-402 Len: 500 Check: 4076 Weight: 1.00 // 1 50 ENSBTAP00000056004/1-448 ---------- ---------- ---------- ---------- ---------- ENSP00000420267/1-480 MERDEPPPSG GGGGGGSAGF LEPPAALPPP PRNGFCQDEL A----ELDPG ENSTTRP00000016482/1-446 ---------- ---------- ---------- ----FCQDEL A----ELDPS bmy_04626T0/1-429 ---------- ---------- ---------- ----MSSVEL HVWPLEMDFY BACU016293/1-402 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000056004/1-448 --SVPDDRAE QRTCLICGDR ATGLHYGIIS CEGCKGFFKR SICNKRVYRC ENSP00000420267/1-480 TISVSDDRAE QRTCLICGDR ATGLHYGIIS CEGCKGFFKR SICNKRVYRC ENSTTRP00000016482/1-446 TISVPDDRAE QRTCLICGDR ATGLHYGIIS CEGCKGFFKR SICNKRVYRC bmy_04626T0/1-429 SVSVPDDRAE QRTCLICGDR ATGLHYGIIS CEGCKGFFKR SICNKRVYRC BACU016293/1-402 SVSVPDDRAE QRTCLICGDR ATGLHYGIIS CEGCKGFFKR SICNKRVYRC 101 150 ENSBTAP00000056004/1-448 SRDKNCVMSR KQRNRCQYCR LLKCLQMGMN RKAIREDGMP GGRNKSIGPV ENSP00000420267/1-480 SRDKNCVMSR KQRNRCQYCR LLKCLQMGMN RKAIREDGMP GGRNKSIGPV ENSTTRP00000016482/1-446 SRDKNCVMSR KQRNRCQYCR LLKCLQMGMN RKAIREDGMP GGRNKSIGPV bmy_04626T0/1-429 SRDKNCVMSR KQRNRCQYCR LLKCLQMGMN RK-------- ---------- BACU016293/1-402 SRDKNCVMSR KQRNRCQYCR LLKCLQMGMN RKAIREDGMP GGRNKSIGPV 151 200 ENSBTAP00000056004/1-448 QISEEEIERI MSGQEFEEEA NHWSNHGDSD HSSPGNRASE SNQPSPGSTL ENSP00000420267/1-480 QISEEEIERI MSGQEFEEEA NHWSNHGDSD HSSPGNRASE SNQPSPGSTL ENSTTRP00000016482/1-446 QISEEEIERI MSGQEFEEEA THWSNHGDSD HSSPGNRASE SNQPSPGSTL bmy_04626T0/1-429 ---EEEIERI MSGQEFEEEA SHWSNHGDSD HSSPGNRASE SNQPSPGSTL BACU016293/1-402 QISEEEIERI MSGQEFEEEA SHWSNHGDSD HSSPGNRASE SNQPSPGSTL 201 250 ENSBTAP00000056004/1-448 SSSRSVELNG FVAFRDQYMG MSVPPHYQYI PHLFTYSAHS PLLPPQARSL ENSP00000420267/1-480 SSSRSVELNG FMAFREQYMG MSVPPHYQYI PHLFSYSGHS PLLPQQARSL ENSTTRP00000016482/1-446 SSSRSVELNG FMAFRDQYMG MSVPPHYQYI PHLFSYSAHS PLLPPQARSL bmy_04626T0/1-429 SSSRSVELNG FMAFRDQYMG MSVPPHYQYI PHLFSYSAHS PLLPPQARSL BACU016293/1-402 SSS------- ---------- ---------- -----YSAHS PLLPPQARSL 251 300 ENSBTAP00000056004/1-448 DPQSYSLIHQ LVSAEDLEPL GTPMLIEDGY AVTQAELFAL LCRLADELLF ENSP00000420267/1-480 DPQSYSLIHQ LLSAEDLEPL GTPMLIEDGY AVTQAELFAL LCRLADELLF ENSTTRP00000016482/1-446 DPQSYSLIHQ LVSAEDLEPL GTPMLIEDGY AVTQAELFAL LCRLADELLF bmy_04626T0/1-429 DPQSYSLIHQ LVSAEDLEPL GTPMLIEDGY AVTQAELFAL LCRLADELLF BACU016293/1-402 DPQSYSLIHQ LVSAEDLEPL GTPMLIEDGY AVTQAELFAL LCRLADELLF 301 350 ENSBTAP00000056004/1-448 RQIAWIKKLP FFCELSIKDY TCLLSSTWQE LILLSSLTVY SKQIFGELAD ENSP00000420267/1-480 RQIAWIKKLP FFCELSIKDY TCLLSSTWQE LILLSSLTVY SKQIFGELAD ENSTTRP00000016482/1-446 RQIAWIKKLP FFCELSIKDY TCLLSSTWQE LILLSSLTVY SKQIFGELAD bmy_04626T0/1-429 RQIAWIKKLP FFCELSIKDY TCLLSSTWQE LILLSSLTVY SKQIFGELAD BACU016293/1-402 RQIAWIKKLP FFCELSIKDY TCLLSSTWQE LILLSSLTVY SKQIFGELAD 351 400 ENSBTAP00000056004/1-448 VTAKYSPSDE ELHRFSDEGM EVIERLIYLY HKFHQLKVSN EEYACMKAIN ENSP00000420267/1-480 VTAKYSPSDE ELHRFSDEGM EVIERLIYLY HKFHQLKVSN EEYACMKAIN ENSTTRP00000016482/1-446 VTAKYSPSDE ELHRFSDEGM EVIERLIYLY HKFHQLKVSN EEYACMKAIN bmy_04626T0/1-429 VTAKYSPSDE ELHRFSDEGM EVIERLIYLY HKFHQLKVSN EEYACMKAIN BACU016293/1-402 VTAKYSPSDE ELHRFSDEGM EVIERLIYLY HKFHQLKVSN EEYACMKAIN 401 450 ENSBTAP00000056004/1-448 FLNQDIRGLT SASQLEQLNK RYWYICQDFT EYKYTHQPNR FPDLMMCLPE ENSP00000420267/1-480 FLNQDIRGLT SASQLEQLNK RYWYICQDFT EYKYTHQPNR FPDLMMCLPE ENSTTRP00000016482/1-446 FLNQDIRGLT SASQLEQLNK RYWYICQDFT EYKYTHQPNR FPDLMMCLPE bmy_04626T0/1-429 FLNQDIRGLT SASQLEQLNK RYWYICQDFT EYKYTHQPNR FPDLMMCLPE BACU016293/1-402 FLNQDIRGLT SASQLEQLNK RYWYICQDFT EYKYTHQPNR FPDLMMCLPE 451 500 ENSBTAP00000056004/1-448 IRYIAGKMVN VPLEQLPLLF KVVLHSCKTT LASSRTSSCP CLNPGPSHSQ ENSP00000420267/1-480 IRYIAGKMVN VPLEQLPLLF KVVLHSCKTS VGKE------ ---------- ENSTTRP00000016482/1-446 IRYIAGKMVN VPLEQLPLLF KVVLHSCKTS VGKE------ ---------- bmy_04626T0/1-429 IRYIAGKMVN VPLEQLPLLF KVVLHSCKTS VGKE------ ---------- BACU016293/1-402 IRYIAGKMVN VPLEQLPLLF KVVLHSCKTS VGKE------ ----------