KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:45 2014 Check: 00 .. Name: ENSP00000309285/1-555 Len: 579 Check: 1244 Weight: 1.00 Name: ENSBTAP00000056012/1-392 Len: 579 Check: 1131 Weight: 1.00 Name: bmy_16997T0/1-562 Len: 579 Check: 5105 Weight: 1.00 Name: BACU004157/1-557 Len: 579 Check: 6045 Weight: 1.00 // 1 50 ENSP00000309285/1-555 MDVSSEHTKD PGGEGGDGES LAARPSKIKA SSGPPTSPEP GELESEPEEE ENSBTAP00000056012/1-392 ---------- ---------- ---------- ---------- ---------- bmy_16997T0/1-562 MDDFSDHTGD PEKEDGDVES LASRLSGIKT SSGPQSPAEP TEPEPEAVEA BACU004157/1-557 MDDRSDHTGD PEKEDGDVES LASRLSGIKT SSGPQSPAEP AEPEPEAVEA 51 100 ENSP00000309285/1-555 EEEQAASQGG TAADEQAEAP KGLTAAEAAG EEGPGEPGRP --AEPQPEPE ENSBTAP00000056012/1-392 ---------- ---------- ---------- ---------- ---------- bmy_16997T0/1-562 SEEGA----- ----EPAESQ ERPAATEVAG EKAPGEPEWP AEAEAEAEPG BACU004157/1-557 SEEGA----- ----EPAESQ ERPAATEVAD EKGPGEPEWP AEAEAEAEPG 101 150 ENSP00000309285/1-555 EPAEVGAEEP AQPEPGAGPE ELE------- ---------- --AEAGAEEL ENSBTAP00000056012/1-392 -----GREEK -----GAEPQ ALE------- ---------- ---------- bmy_16997T0/1-562 DLAEAGREEP AKPEPEGGPE EPEKEEW-EE EEWEEEEEED EDEDEDEEEA BACU004157/1-557 DLAEAGPEEP AEPEPEGLPE EPEKEEWEEE EEWEEK---- --EDEDEEEA 151 200 ENSP00000309285/1-555 EQAAEGKEVR FQASLPLTRI DEEEAAAAPE AETERVEGEE EDKEETQRDG ENSBTAP00000056012/1-392 ---------- ---------- ---------- ---------- ---------- bmy_16997T0/1-562 EVAAEPRRKE TPSQVSLQQV TAGKEEAAPD REAER-EGQL AEEGEES--- BACU004157/1-557 EVAAEPRRKE IPSQVSLQQA TAGKEEAAPD REAER-EGQL AEEGEES--- 201 250 ENSP00000309285/1-555 AESKERDGEG RPAKSQEEGK RLYGRDEFED LEWSEEVQKL QEQQLRSDLL ENSBTAP00000056012/1-392 SGRKRKRGGT RPRKDEDELR NLDEGLVLEP YDWSEEVQKQ QEQQLRAELL bmy_16997T0/1-562 EESEKQLVQG GLGKTEDELG DLDEGLELGS CDWTEEVQTQ QEQQLRAELL BACU004157/1-557 EESEKKLVQG GLGKTEDELG DLDEGLELGS CDWTEEVRTQ QEQQLRAELL 251 300 ENSP00000309285/1-555 DQYRSLLVER NRSQRYNLYL QHKIFEALRR KKGLE-AAEV A--DRGAEAE ENSBTAP00000056012/1-392 EQYRALVVER GRYQRYNIYL QHKIFEALRK KKGVEAAAEA PGGDRGAEPE bmy_16997T0/1-562 EQYRSLMVAR GRYQRYNIYL QHKILEALRK KKGLD-AAEV P--EKGAEPE BACU004157/1-557 EQYRSLMVAR GRYQRYNIYL QHKIFEALRK KKGLD-AAEV P--EKGAEPE 301 350 ENSP00000309285/1-555 APEKEQAYLR HLGMLEELKK QQADDLQWYH QELGQLKRQC QEKLTRVEKE ENSBTAP00000056012/1-392 APEKEQAYLR HLAVLEDLRK QEADDLRWYH HELDQLKLQC QEKVSRVDKE bmy_16997T0/1-562 APEKEQAYLR HLAMLEDLRK QESDDLRWYH RELDQLKQQC KEKLSRAEKE BACU004157/1-557 APEKEQAYLR HLAMLEDLRK QESDDLRWYH RELDQLKQQC KEKLSRAEKE 351 400 ENSP00000309285/1-555 WRRFQALKKQ VVMQAMGSCR MRGGRQAALR EVEQIQALED KKEKEMSAVR ENSBTAP00000056012/1-392 WRRFQALKKQ VVMQAMGSCW MRGGRQVALR EVEQIQALED KKEKEMSAVR bmy_16997T0/1-562 WRRLQALKKQ VVMQAMGSCR TRGGRQAALR EVEQIQALED KKEKEISAVR BACU004157/1-557 WRRLQALKKQ VVMQAMGSCR TRGGRQAALR EVEQIQALED KKEKEISAVR 401 450 ENSP00000309285/1-555 LENIQLKQSL VHFETRMRTQ EDLTQGLLLI DFEQLKIENQ TFNEKIEERN ENSBTAP00000056012/1-392 LENVQLKQSL VHFETRMRTQ EDLTEGLLLI DFEQLKIENQ TFNEKVEERN bmy_16997T0/1-562 LENVQLKQSL VHFENRMRAQ EDLTEGLLLI DFEQLKIENQ TFNEKVEERN BACU004157/1-557 LENVQLKQSL VHFENRMRAQ EDLTEGLLLI DFEQLKIENQ TFNEKVEERN 451 500 ENSP00000309285/1-555 EELLKLRSKV TNSVQVITHV KEKLHFMDME NACKKTQLAE IEAQAALGRD ENSBTAP00000056012/1-392 EELLKLRSKV TNNVQIITHV KEKLHFVDIE NMCKKAELMD IEAQVAQKRD bmy_16997T0/1-562 EELLKLRSKV TNNVQIITHV KEKLHFVVIE NACKKSELME IEAQVALKRD BACU004157/1-557 EELLKLRSKV TNNVQIITHV KEKLHFVDIE NACKKSELME IEAQVAQKRD 501 550 ENSP00000309285/1-555 ILTKTKQARE GLRTDNIRLN QKCGLLGKDS LLRDLEEKVD KTELLHRRLE ENSBTAP00000056012/1-392 ILTKTKQARD GLRLDNIRLN QKCGLLGKES LLRDMEEKVD RTEVLNQRLA bmy_16997T0/1-562 ILTKTKQARD SLRIDNIKLN QKCGLLGKEA LLRDMEEKVD RTEELNQRLE BACU004157/1-557 ILTKTKQARD SLRIDNIKLN QKCGLLGKEA LLRDMEEKVD RTEELNQRLE 551 600 ENSP00000309285/1-555 SLKRHHASLT LSCRGVRQKI REAKAFLPS ENSBTAP00000056012/1-392 SLKHHHAGLV LSCKGVKQKI REAKAFLPS bmy_16997T0/1-562 ALKHHHAGLI LSCRGVKQKI REAKAFLPS BACU004157/1-557 ALKHHHAGLI LSCRGVKQKI REAKAFLPS