KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:47 2014 Check: 00 .. Name: ENSP00000312017/1-257 Len: 258 Check: 3333 Weight: 1.00 Name: ENSBTAP00000056027/1-258 Len: 258 Check: 2557 Weight: 1.00 Name: bmy_12285T0/1-168 Len: 258 Check: 8894 Weight: 1.00 Name: BACU010471/1-226 Len: 258 Check: 9672 Weight: 1.00 Name: ENSTTRP00000002876/1-257 Len: 258 Check: 3999 Weight: 1.00 // 1 50 ENSP00000312017/1-257 MLLTLAGGAL FFPGLFALCT WALRRSQPGW SRTDCVMIST RLVSSVHAVL ENSBTAP00000056027/1-258 MLLPLAWGSL FFPGLFGVCT WGLRRARPAW THHDCVMIST RLVSSVQAVL bmy_12285T0/1-168 ---------- ---------- ---------- ---------- ---------- BACU010471/1-226 MLLPLAWGSL FFPGLFVLCT WGLRRARPAW THNDCVLIST RLVSSVQAVL ENSTTRP00000002876/1-257 -LLPLAWGLL LFPGLFGLCA WGLRRARPAW THNDCVLIST RLVSSVQAVL 51 100 ENSP00000312017/1-257 ATGSGIVIIR SCDDVITGRH WLAREYVWFL IPYMIYDSYA MYLCEWCRTR ENSBTAP00000056027/1-258 ATGSGIIVIR SCSDVITDRH WLAREYVWFL IPYMIYDTYA MYLCEWYRAG bmy_12285T0/1-168 ---------- ---------- ---------- ---------- MYLCEWYRTG BACU010471/1-226 ATGSGIIIIR SCSHVITDRH WLAREYVWFL IPYMIYDSYA MYLCEWYRTR ENSTTRP00000002876/1-257 ATGSGIIIIR SCSHVITDRH WLAREYVWFL IPYMIYDSYA MYLCEWYRTR 101 150 ENSP00000312017/1-257 DQNRAPSLTL -RNFLSRNRL MITHHAVILF VLVPVAQRLR GDLGDFFVGC ENSBTAP00000056027/1-258 DQSSKHSLTI FRNFLSKNRL MITHHVFILL VLVPIAQKLR GELGDFFVGC bmy_12285T0/1-168 DQSSRHSLAI FRNFLSKNRL MITHHAVILF VLVPVAQRLR GELGDFFAGC BACU010471/1-226 DQSSKHTLTI FRNFLSKNRL MITHHAVILF VLVPVA---- ---------- ENSTTRP00000002876/1-257 DQSSKHPLTI FRNFLSKNRL MITHHAVILF VLVPVAQRLR GELGDFFVGC 151 200 ENSP00000312017/1-257 IFTAELSTPF VSLGRVLIQL KQQHTLLYKV NGILTLATFL SCRILLFPFM ENSBTAP00000056027/1-258 IFTAELSTPF VSLGRILIQL QQQHSLLYKV NGILTLTTFF MCRILLFPFM bmy_12285T0/1-168 IFTAELXTPF VSLGRVLIQP KQQHTLLYKV NGILTLTTFF LCRILLFPFM BACU010471/1-226 ---------- --------QL KQQHTLLYKV NGILTLTTFF LCRILLFPFM ENSTTRP00000002876/1-257 IFMAELSTPF VSLGRVLIQL KQQHTLLYKV NGILTLTTFF SCRILLFPFM 201 250 ENSP00000312017/1-257 YWSYGRQQGL SLLQVPFSIP FYCNVANAFL VAPQIYWFCL LCRKAVRLFD ENSBTAP00000056027/1-258 YWSYGRQQGL SLLRVPFHIP FHCNVANAFL IAPQIYWFSL LCKKAARLFD bmy_12285T0/1-168 YWSYGHQQGL SLLQVPFHIP FYCSVANAFL IAPQIYGFSL LCKKASRLFD BACU010471/1-226 YWSYGQQQGL SLLQVPFHIP FYCNVANAFL IAPQIYWFSL LCKKAARLFD ENSTTRP00000002876/1-257 YWSYGQQQGL SLLQVPFHIP FYCNVANAFL IAPQIYWFSL LCKKAVRLFD 251 300 ENSP00000312017/1-257 TPQAKKDG ENSBTAP00000056027/1-258 VPPAKKDS bmy_12285T0/1-168 APPAKKDG BACU010471/1-226 APPAKKDG ENSTTRP00000002876/1-257 APPAKKDG