KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:53 2014 Check: 00 .. Name: BACU013065/1-544 Len: 683 Check: 2529 Weight: 1.00 Name: ENSBTAP00000056064/1-535 Len: 683 Check: 4166 Weight: 1.00 Name: bmy_08342T0/1-672 Len: 683 Check: 2137 Weight: 1.00 Name: ENSTTRP00000002727/1-535 Len: 683 Check: 3387 Weight: 1.00 // 1 50 BACU013065/1-544 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056064/1-535 ---------- ---------- ---------- ---------- ---------- bmy_08342T0/1-672 MKGAGGRPQA RSRLPRGRAA SAFPGVAGCG SDPWPTLSGR GARGRGRGSG ENSTTRP00000002727/1-535 ---------- ---------- ---------- ---------- ---------- 51 100 BACU013065/1-544 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056064/1-535 ---------- ---------- ---------- ---------- ---------- bmy_08342T0/1-672 GRGGRWGRGC SSSGRSPATA GGGAAEGGGA ERAGCRRGRF WKRRERRVSG ENSTTRP00000002727/1-535 ---------- ---------- ---------- ---------- ---------- 101 150 BACU013065/1-544 ---------- ---------- ---------- -------MKL WVSMLLVAWF ENSBTAP00000056064/1-535 ---------- ---------- ---------- -------MKP WESTLLVAWF bmy_08342T0/1-672 NPFEGGGRGW ASLSLIWNHS GLEFLLKGKF PTLPSVTMKL WVCMLLVAWF ENSTTRP00000002727/1-535 ---------- ---------- ---------- -------MKL WVSMLLVAWF 151 200 BACU013065/1-544 GVLGCVQAEF FTSIGHMTDL IYAEKDLVLS LKEYILVEEA KLSKIKSWAN ENSBTAP00000056064/1-535 GVLSCVQAEF FTSIGHMTDL IYAEKDLVQS LKEYILVEEA KLSKIKSWAD bmy_08342T0/1-672 GVLGCVQAEF FTSIGHMTDL IYAEKDLVLS LKEYILVEEA KLSKIKSWAN ENSTTRP00000002727/1-535 GVLGCVQAEF FTSIGHMTDL IYAEKDLVLS LKEYILVEEA KLSKIKSWAN 201 250 BACU013065/1-544 KMEALTSKSA ADPEGYLSHP VNAYKLVKRL NTDWPALEDL VLQNSAAGFI ENSBTAP00000056064/1-535 KMEALTSKSA ADPEGYLAHP VNAYKLVKRL NTDWPALEDL VLQNSAADFI bmy_08342T0/1-672 KMEALTSKSA ADPEGYLSHP VNAYKLVKRL NTDWPALEDL VLQNSAAGFI ENSTTRP00000002727/1-535 KMEALTSKSA ADPEGYLSHP VNAYKLVKRL NTDWPALEDL VLQNSAAGFI 251 300 BACU013065/1-544 ANLSVQRQFF PTDEDETGAA KALMRLQDTY KLDPDTISKG ELPGTKYQAV ENSBTAP00000056064/1-535 ANLSVQRQFF PTDEDETGAA KALMRLQDTY KLDPDTISKG ELPGTKYQAM bmy_08342T0/1-672 ANLSVQRQFF PTDEDETGAA KALMRLQDTY KLDPDTISKG ELPGTKYQAV ENSTTRP00000002727/1-535 ANLSVQRQFF PTDEDETGAA KALMRLQDTY KLDPDTISKG ELPGTKYQAV 301 350 BACU013065/1-544 LSVDDCFGMG RSAYNEGDYY HTVLWMEQVL KQLDAGEEAT TSKAQVLDYL ENSBTAP00000056064/1-535 LSVDDCFGMG RSAYNEGDYY HTVLWMEQVL KQLDAGEEAT TSKAQVLDYL bmy_08342T0/1-672 LSVDDCFGMG RSAYNEGDYY HTVLWMEQVL KQLDAGEEAT TSKAQVLDYL ENSTTRP00000002727/1-535 LSVDDCFGMG RSAYNEGDYY HTVLWMEQVL KQLDAGEEAT TSKAQVLDYL 351 400 BACU013065/1-544 SYAVFQLGDL HRALELTRRL LSLDPSHERA GGNLRYFERL LEEEREKMLL ENSBTAP00000056064/1-535 SYAVFQLGDL HRAVELTRRL LSLDPSHERA GGNLHYFERL LEEEREKMLS bmy_08342T0/1-672 SYAVFQLGDL HRALELTRRL LSLDPSHERA GGNLRYFERL LEEEREKMLL ENSTTRP00000002727/1-535 SYAVFQLGDL HRALELTRRL LSLDPSHERA GGNLRYFERL LEEEREKMLL 401 450 BACU013065/1-544 NHTEAELAPQ EGIYERPVDY LPERDIYESL CRGEGVKLTP RRQKRLFCRY ENSBTAP00000056064/1-535 NHTEAELASQ QGIYERPVDY LPERDVYESL CRGEGVKLTP RRQKRLFCRY bmy_08342T0/1-672 NHTEAELAPQ EGIYERPVDY LPERDIYESL CRGEGVKLTP RRQKRLFCRY ENSTTRP00000002727/1-535 NHTEAELAPQ EGIYERPVDY LPERDIYESL CRGEGVKLTP RRQKRLFCRY 451 500 BACU013065/1-544 HHGNGTPQLL IAPFKEEDEW DSPHIVRYYD VMSDEEIERI KEIAKPKLAR ENSBTAP00000056064/1-535 HHGNRVPQLL IAPFKEEDEW DSPHIVRYYD VMSDEEIERI KEIAKPKLAR bmy_08342T0/1-672 HHGNGTPQLL IAPFKEEDEW DSPHIVRYYD VMSDEEIERI KEIAKPKLAR ENSTTRP00000002727/1-535 HHGNGTPQLL IAPFKEEDEW DSPHIVRYYD VMSDEEIERI KEVAKPKLAR 501 550 BACU013065/1-544 ATVRDPKTGV LTVASYRVSK SSWLEEDDDP VVARVNLRMQ HITGLTVKTA ENSBTAP00000056064/1-535 ATVRDPKTGV LTVASYRVSK SSWLEEDDDP VVARVNLRMQ HITGLTVKTA bmy_08342T0/1-672 ATVRDPKTGV LTVASYRVSK SSWLEEDDDP VVARVNLRMQ HITGLTVKTA ENSTTRP00000002727/1-535 ATVRDPKTGV LTVASYRVSK SSWLEEEDDP VVARVNLRMQ HITGLTVKTA 551 600 BACU013065/1-544 ELLQVANYGM GGQYEPHFDF SRKDEQDAFK RLGTGNRVAT FLNYMSDVEA ENSBTAP00000056064/1-535 ELLQVANYGM GGQYEPHFDF SRKDEQDAFK RLGTGNRVAT FLNYMSDVEA bmy_08342T0/1-672 ELLQVANYGM GGQYEPHFDF SRKDEQDAFK RLGTGNRVAT FLNYMSDVEA ENSTTRP00000002727/1-535 ELLQVANYGM GGQYEPHFDF SRKDEQDAFK RLGTGNRVAT FLNYMSDVEA 601 650 BACU013065/1-544 GGATVFPDLG AALWPKKGTA VFWYNLLRSG EGDYRTRHAA CPVLVGCKW- ENSBTAP00000056064/1-535 GGATVFPDLG AAIWPKKGTA VFWYNLLRSG EGDYRTRHAA CPVLVGCKWV bmy_08342T0/1-672 GGATVFPDLG AALWPKKGTA VFWYNLLRSG EGDYRTRHAA CPVLVGCKWV ENSTTRP00000002727/1-535 GGATVFPDLG AALWPKKGTA VFWYNLLRSG EGDYRTRHAA CPVLVGCKWV 651 700 BACU013065/1-544 -DPYVQLPSG HIYLDLAHKS GMDVTNYAVN DHK ENSBTAP00000056064/1-535 SNKWFH-ERG QEFLRPCGST EVD------- --- bmy_08342T0/1-672 SNKWFH-ERG QEFLRPCGST EVD------- --- ENSTTRP00000002727/1-535 SNKWFH-ERG QEFLRPCGST EVD------- ---