KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:53 2014 Check: 00 .. Name: bmy_15148T0/1-400 Len: 401 Check: 2757 Weight: 1.00 Name: ENSP00000353824/1-326 Len: 401 Check: 9884 Weight: 1.00 Name: ENSTTRP00000016267/1-326 Len: 401 Check: 8594 Weight: 1.00 Name: ENSBTAP00000056068/1-326 Len: 401 Check: 9929 Weight: 1.00 // 1 50 bmy_15148T0/1-400 MVSVEAIHFP DEKPRDTGIW GMYECLLMDS LERPRDLQFT ASEGLCRCSG ENSP00000353824/1-326 ---------- ---------- ----MLLS-- -------KFG SLAHLCGPGG ENSTTRP00000016267/1-326 ---------- ---------- ----MLLS-- -------KFG SLAHLCGPGG ENSBTAP00000056068/1-326 ---------- ---------- ----MLLS-- -------KFG SLAHLCGPGG 51 100 bmy_15148T0/1-400 TFVTFANGES VSGSACCSCR RDPRGAWQDT APRGLPRPNR PALRG-RRSW ENSP00000353824/1-326 V--------- ---------- --------DH LPVKILQPAK ADKESFEKAY ENSTTRP00000016267/1-326 V--------- ---------- --------DH LPVKILQPVK ADKESFEKVY ENSBTAP00000056068/1-326 V--------- ---------- --------DH LPVKILQPAK VEKESFEKVY 101 150 bmy_15148T0/1-400 RTCPLSASGS RPGRRPRXCS PSSVPWRTCA DQAAWIISRQ VAVKHVVKER ENSP00000353824/1-326 QVGAVLGSGG FGTVYAGSRI ADGLP----- ---------- VAVKHVVKER ENSTTRP00000016267/1-326 QVGAVLGSGG FGTVYAGSRI ADGLP----- ---------- VAVKHVVKER ENSBTAP00000056068/1-326 QVGAVLGSGG FGTVYAGSRI ADGLP----- ---------- VAVKHVVKER 151 200 bmy_15148T0/1-400 VTEWGSIAGA AVPLEVVLLR KVDAAGGARG VIRLLYWFER SDGFLLVLER ENSP00000353824/1-326 VTEWGSLGGA TVPLEVVLLR KVGAAGGARG VIRLLDWFER PDGFLLVLER ENSTTRP00000016267/1-326 VTEWGSIAGA AVPLEVVLLR KVGAAGGARG VIRLLDWFER SDGFLLVLER ENSBTAP00000056068/1-326 VTEWGSIAGA VVPLEVVLLR KVGAAGGARG VIRLLDWFER PDGFLLVLER 201 250 bmy_15148T0/1-400 PEPAQDLFDV ITEQGALDEA LARRFFGQVL AAVRHCHGCG VVHRDIKDEN ENSP00000353824/1-326 PEPAQDLFDF ITERGALDEP LARRFFAQVL AAVRHCHSCG VVHRDIKDEN ENSTTRP00000016267/1-326 PEPAQDLFDF ITERGALDEA LARRFFAQVL AAVRHCHGCG VVHRDIKDEN ENSBTAP00000056068/1-326 PEPAQDLFDF ITERGALDEA LARRFFAQVL AAVRHCHSCG VVHRDIKDEN 251 300 bmy_15148T0/1-400 LLVDLRSGEL KLIDFGSGAL LRDTVYTDFD GTCVYSPPEW IRYHRYHGRS ENSP00000353824/1-326 LLVDLRSGEL KLIDFGSGAL LKDTVYTDFD GTRVYSPPEW IRYHRYHGRS ENSTTRP00000016267/1-326 LLVDLRSGEL KLIDFGSGAL LRDTVYTDFD GTRVYSPPEW IRYHRYHGRS ENSBTAP00000056068/1-326 LLVDLRSGEL KLIDFGSGAL LRDTVYTDFD GTRVYSPPEW IRYHRYHGRS 301 350 bmy_15148T0/1-400 ATVWSLGVLL YDMVCGDIPF EQDEEILRGR LFFRRRVSPE CQQLIQWCLS ENSP00000353824/1-326 ATVWSLGVLL YDMVCGDIPF EQDEEILRGR LLFRRRVSPE CQQLIRWCLS ENSTTRP00000016267/1-326 ATVWSLGVLL YDMVCGDIPF EQDEEILRGR LFFRRRVSPE CQQLIQWCLS ENSBTAP00000056068/1-326 ATVWSLGVLL YDMVCGDIPF EQDEEILRGR LFFRRRVSPE CQQLIQWCLS 351 400 bmy_15148T0/1-400 LRPSERPSLD QISAHPWMLG AEGGTPESCD LRLCALDTDD GASTTSSSES ENSP00000353824/1-326 LRPSERPSLD QIAAHPWMLG ADGGVPESCD LRLCTLDPDD VASTTSSSES ENSTTRP00000016267/1-326 LRPSERPSLD QISAHPWMLG AEGGTPESCD LRLCALDTDD GASTTSSRES ENSBTAP00000056068/1-326 LRPSERPSLD QISAHPWMLG AEGGTPESCD LRLCALDTDD GASTTSSSES 401 450 bmy_15148T0/1-400 L ENSP00000353824/1-326 L ENSTTRP00000016267/1-326 L ENSBTAP00000056068/1-326 L