KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:55 2014 Check: 00 .. Name: BACU006697/1-422 Len: 422 Check: 5687 Weight: 1.00 Name: bmy_12566T0/1-154 Len: 422 Check: 5414 Weight: 1.00 Name: ENSP00000365159/1-129 Len: 422 Check: 2579 Weight: 1.00 Name: ENSBTAP00000056081/1-129 Len: 422 Check: 2579 Weight: 1.00 Name: ENSTTRP00000003968/1-129 Len: 422 Check: 2852 Weight: 1.00 // 1 50 BACU006697/1-422 MSASLVRATV RAVSKRKLQP TRAALTLTLL QHLHLAQPPP DKVKEHTRAI bmy_12566T0/1-154 MSASLVRATV RAVSKRKLQP IRAALTLTLL QHLHLAKPPP DRVKEHTRAI ENSP00000365159/1-129 MSASLVRATV RAVSKRKLQP TRAALTL--- ---------- ---------- ENSBTAP00000056081/1-129 MSASLVRATV RAVSKRKLQP TRAALTL--- ---------- ---------- ENSTTRP00000003968/1-129 MSASLVRATV RAVSKRKLQP TRAALTL--- ---------- ---------- 51 100 BACU006697/1-422 HQTPSAVNKI KQLLKDKPEH VGVKVGVRTR GCNGLSYTLE YTKTKGDSDE bmy_12566T0/1-154 HQTPSAVNKI KQLLKDKPEH VGLKVGVRTR GCNGLSYTLE YTKTKGDSDE ENSP00000365159/1-129 --TPSAVNKI KQLLKDKPEH VGVKVGVRTR GCNGLSYTLE YTKTKGDSDE ENSBTAP00000056081/1-129 --TPSAVNKI KQLLKDKPEH VGVKVGVRTR GCNGLSYTLE YTKTKGDSDE ENSTTRP00000003968/1-129 --TPSAVNKI KQLLKDKPEH VGVKVGVRTR GCNGLSYTLE YTKTKGDSDE 101 150 BACU006697/1-422 EVVQDGVRVF IEKKAQLTLL GTEMDYVEDK LSTGLSVLKA TVHRTSEGPE bmy_12566T0/1-154 EVVQDGVRVF IEKKAQLTLL GTEMDYVEDK LSS------- ---------- ENSP00000365159/1-129 EVIQDGVRVF IEKKAQLTLL GTEMDYVEDK LSS------- ---------- ENSBTAP00000056081/1-129 EVIQDGVRVF IEKKAQLTLL GTEMDYVEDK LSS------- ---------- ENSTTRP00000003968/1-129 EVVQDGVRVF IEKKAQLTLL GTEMDYVEDK LSS------- ---------- 151 200 BACU006697/1-422 QESENKIPVQ CSSIETQIQV KMTSQLSLGH VRYVFRLPEL YAFVEHFNKE bmy_12566T0/1-154 ---------- ---------- ---------- -EFVFNNP-- ---------- ENSP00000365159/1-129 ---------- ---------- ---------- -EFVFNNP-- ---------- ENSBTAP00000056081/1-129 ---------- ---------- ---------- -EFVFNNP-- ---------- ENSTTRP00000003968/1-129 ---------- ---------- ---------- -EFVFNNP-- ---------- 201 250 BACU006697/1-422 NKKSNLLKTH CISPSEAQKI LSQNLNGTSK TDGRGEDSQP VFTCKVVRKE bmy_12566T0/1-154 ---------- ---------- ---NIKGTC- --GCGE---- ---------- ENSP00000365159/1-129 ---------- ---------- ---NIKGTC- --GCGE---- ---------- ENSBTAP00000056081/1-129 ---------- ---------- ---NIKGTC- --GCGE---- ---------- ENSTTRP00000003968/1-129 ---------- ---------- ---NIKGTC- --GCGE---- ---------- 251 300 BACU006697/1-422 ERPESMTELL HRSLLTRSLS PVERLSKSQN RISQYGIPPP VHTFPYEILM bmy_12566T0/1-154 ---------- ---------- ---------- ---------- ----SFNI-- ENSP00000365159/1-129 ---------- ---------- ---------- ---------- ----SFNI-- ENSBTAP00000056081/1-129 ---------- ---------- ---------- ---------- ----SFNI-- ENSTTRP00000003968/1-129 ---------- ---------- ---------- ---------- ----SFNI-- 301 350 BACU006697/1-422 DHSKSMSLVA IRKRIQSTEI LCRLGIPTIS PEKFIFEDKV PKYLLVDPEK bmy_12566T0/1-154 ---------- ---------- ---------- ---------- ---------- ENSP00000365159/1-129 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056081/1-129 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003968/1-129 ---------- ---------- ---------- ---------- ---------- 351 400 BACU006697/1-422 QFMDLRDLEW RFYKGIVKWK RRTSDAFINI KYNSEKRFVG SQQTPHPISP bmy_12566T0/1-154 ---------- ---------- ---------- ---------- ---------- ENSP00000365159/1-129 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056081/1-129 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003968/1-129 ---------- ---------- ---------- ---------- ---------- 401 450 BACU006697/1-422 PLVHKSLVIY PQVDYPKKLT SS bmy_12566T0/1-154 ---------- ---------- -- ENSP00000365159/1-129 ---------- ---------- -- ENSBTAP00000056081/1-129 ---------- ---------- -- ENSTTRP00000003968/1-129 ---------- ---------- --