KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:06 2014 Check: 00 .. Name: ENSP00000386348/1-394 Len: 503 Check: 4881 Weight: 1.00 Name: ENSBTAP00000056148/1-393 Len: 503 Check: 224 Weight: 1.00 Name: ENSTTRP00000001962/1-247 Len: 503 Check: 4725 Weight: 1.00 Name: bmy_14836T0/1-402 Len: 503 Check: 7469 Weight: 1.00 Name: BACU009833/1-232 Len: 503 Check: 2291 Weight: 1.00 // 1 50 ENSP00000386348/1-394 MAGAAMAERG RVPPPAPAPS TEGLPRAFLQ SLRTLFDILD DRRRGCVHLR ENSBTAP00000056148/1-393 MAGAAMAEPG GGPP--PAPG TEGLPRAFLQ SLRTLFDILD DRRRGLVHLR ENSTTRP00000001962/1-247 -------GPG GAA------- ---------- ---------- ---RSLEKLC bmy_14836T0/1-402 MAGAAMAEPG RGPPFAPAPG TEGLPRAFLQ SLRTLFDILD DRRRGIVHLR BACU009833/1-232 ---------- ---------- ---------- ---------- ---MGLCGAG 51 100 ENSP00000386348/1-394 EIESRWQGTD ARELPRGVLE GLRQVAPASG YLTFERFVAG LRTSLLSADG ENSBTAP00000056148/1-393 EIESRWRGAD ARELPRGVLE GL-QVAPASG YLTFERFVAG LRTALPSSDG ENSTTRP00000001962/1-247 SPAEAAPGPE EPERPQG--- ---------- ---------- ---------- bmy_14836T0/1-402 EIESRWQGAD ARELPRGVLE GLRQVAPASG YLTFERF--- ---------- BACU009833/1-232 GLELDLAGLE VSQ------- ---------- ---------- ---------- 101 150 ENSP00000386348/1-394 GPRDPTRAPA RPGDQP---- PPPPQRLVFA PADEPRTVLE RKPLPLGVRA ENSBTAP00000056148/1-393 GTRGPARDPA REGCSARPGG QPPPSRLVFA PADEPRTVLE RKPLPLGARP ENSTTRP00000001962/1-247 ---------- ---------- ---------- ---------- ---------- bmy_14836T0/1-402 ---------- ---------- ---------- ---------- ---------- BACU009833/1-232 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000386348/1-394 PLAGPSAAAR SPEQLCAPAE AAPCPAEPER SQSAALEPSS SADAGAVACR ENSBTAP00000056148/1-393 APAAPGVASR NLEKPCGPAE AAAGPAEPEL LRGAALERSP SKDTGAVTCR ENSTTRP00000001962/1-247 ---------- ---------- ---------- ---AALERSP NTDADAVACR bmy_14836T0/1-402 ---------- ---------- ---------- --------AL ASAADAVACR BACU009833/1-232 ---------- ---------- ---------- --------AL ASAADAVACR 201 250 ENSP00000386348/1-394 ALEADSGDAR RAPRARGERR RHTIASGVDC GL-------- ---------- ENSBTAP00000056148/1-393 AQELGTGAAH WGPRARGERR RHTITNGVDC AL-------- ---------- ENSTTRP00000001962/1-247 ARELGVGDAR WGPRARGERR RHTITNGVDC DL-------- ---------- bmy_14836T0/1-402 ARELGMGDAR WGPRARGERR RHTITNGVDC DLAGPPAGGL PLAVKRGEGC BACU009833/1-232 ARELGVGDAR WGPRARGERR RHTITNGVDC DL-------- ---------- 251 300 ENSP00000386348/1-394 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056148/1-393 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001962/1-247 ---------- ---------- ---------- ---------- ---------- bmy_14836T0/1-402 PGEGCVEGLR RARPPRRRSP PGGGAPPGGG GGRASQRRRA HASTGACTRA BACU009833/1-232 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000386348/1-394 ---------- ---------- ---------- -----LKQMK ELEQEKEVLL ENSBTAP00000056148/1-393 ---------- ---------- ---------- -----LKQMR ELQQEQEVLL ENSTTRP00000001962/1-247 ---------- ---------- ---------- -----LKQMK ELEQEQEVLL bmy_14836T0/1-402 GGPVPVRAGV SCGRRQVQAA PAVTPAGMVH ARVSQLKQMK ELEQEQEVLL BACU009833/1-232 ---------- ---------- ---------- -----LKQMK ELEQEQEVLL 351 400 ENSP00000386348/1-394 QGLEMMARGR DWYQQQLQRV QERQRRLGQS RASADFGAAG SPRPLGRLLP ENSBTAP00000056148/1-393 QGLEMMARGR EWYQQQLQRL QERQHRLGQS RASSDLGAEG SPRLLGQLLP ENSTTRP00000001962/1-247 QGLEMMARGR EWYQQQLQRV QERQRRLGQS RASAGFGAEG SPRLLGQLLP bmy_14836T0/1-402 RGLEMMARGR EWYQQQLQRV QERQRRLGQS RASAGFGAEG SPRLLGQLLP BACU009833/1-232 QGLEMMARGR EWYQQQLQRV QKPQRRLGQS RASAGCGAEG SPRLLGQLLP 401 450 ENSP00000386348/1-394 KVQEVARCLG ELLAAACASR ALPPSSSGPP CPALTSTSP- -PVWQQQTIL ENSBTAP00000056148/1-393 KVQEVARCLG ELLAAACATR ALPSSSSGPP GPV----SPS APNWQQQTIL ENSTTRP00000001962/1-247 KVQEVARCLG ELLAAACAGR ALPSSSSGPL GPALAPASPA VPSWQQQTVL bmy_14836T0/1-402 KVQEVARCLG ELLAAACAGR ALPSSSSGPL GPALAPASPS VPGWQRRTIL BACU009833/1-232 KVQEVARCLG ELLAAACAGR ALPSSSSGPL GPALAPASPS VPGWQRQTIL 451 500 ENSP00000386348/1-394 MLKEQNRLLT QEVTEKSERI TQLEQEKSAL IKQLFEARAL SQQDGGPLDS ENSBTAP00000056148/1-393 MLKEQNRLLT QEVTDKSERI TQLEQEKSAL IKQLFEARAL SQQDAGPLDS ENSTTRP00000001962/1-247 MLKEQNRLLT HEVTDKSERI TQLEQEKSAL IKQLFEARAL SQQDAGPLDS bmy_14836T0/1-402 MLKEQNRLLT QEVTDKSERI TQLEQEKSAL IKQLFEARAL SQRDAGPLDS BACU009833/1-232 MLKEQNRLLT QEVTDKSERI TQLEQEKSAL IKQLFEARAL SQQDAGPLDS 501 550 ENSP00000386348/1-394 TFI ENSBTAP00000056148/1-393 TFM ENSTTRP00000001962/1-247 TFI bmy_14836T0/1-402 TFT BACU009833/1-232 TFI