KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:06 2014 Check: 00 .. Name: ENSP00000392398/1-221 Len: 221 Check: 4831 Weight: 1.00 Name: ENSBTAP00000056156/1-219 Len: 221 Check: 7573 Weight: 1.00 Name: ENSTTRP00000014831/1-191 Len: 221 Check: 4486 Weight: 1.00 Name: bmy_11237T0/1-219 Len: 221 Check: 8522 Weight: 1.00 Name: BACU007845/1-192 Len: 221 Check: 8306 Weight: 1.00 // 1 50 ENSP00000392398/1-221 MTTQLRVVHL LPLLLACFVQ TSPKQEKMKM DCHKDEKGTI YDYEAIALNK ENSBTAP00000056156/1-219 MTIQLRASCL FLFFLAGFVQ TNSNLE--KM DCYKDVKGTI YDYDAFTLNG ENSTTRP00000014831/1-191 MTVQLRASYL SPLFLAGFVQ SNSKLE---- ---------- ---------- bmy_11237T0/1-219 MTVQLRAPYL FPLFLAGFVQ SNSKLE--KM DCYQYVKGTI YDYDAFTLNG BACU007845/1-192 ---------- ---------- ---------M DCYKYVKGTI YDYDAFTLNG 51 100 ENSP00000392398/1-221 NEYVSFKQYV GKHILFVNVA TYCGLTAQYP ELNALQEELK PYGLVVLGFP ENSBTAP00000056156/1-219 KEHIQFKQYA GKHVLFVNVA TYCGLTAQYP ELNALQEELK PFGLVVLGFP ENSTTRP00000014831/1-191 ------KQYA GKHVLFVNVA TYCGLTAQYS ELSALQEELK PFDLVVLGFP bmy_11237T0/1-219 KEHIQFKQYV GKHVLFVNVA TYCGLTAQYP ELSALQEELN PFDLVVLGFP BACU007845/1-192 KEHIQFKQYV GKHVLFVNVA TYCGLTAQHP ELSALQEELK PFDLVVLGFP 101 150 ENSP00000392398/1-221 CNQFGKQEPG DNKEILPGLK YVRPGGGFVP SFQLFEKGDV NGEKEQKVFS ENSBTAP00000056156/1-219 CNQFGKQEPG ENSEILPGLK YVRPGGGYVP NFQLFEKGDV NGETEQKVFT ENSTTRP00000014831/1-191 CNQFGKQEPG ENSEILPGLK YVRPGGGYVP NFQLFEKGDV NGEKEQKVFI bmy_11237T0/1-219 CNEFGKQERG ENSEILPGLK YVCPGGGYVP NFQLFEKGDV NGEKEQKVFT BACU007845/1-192 CNQFGKQEPG ENSEILPGLK YVRPGGGYVP NFQLFEKGDV NGKKEQKVFT 151 200 ENSP00000392398/1-221 FLKHSCPHPS EILGTFKSIS WDPVKVHDIR WNFEKFLVGP DGIPVMRWSH ENSBTAP00000056156/1-219 FLKQSCPHPS EIMGSIKHIS WEPIMVRDIR WNFEKFLVGP DGIPVMRWFH ENSTTRP00000014831/1-191 FLKQSCPHPS ELMGSIKHIS WEPIMVHDIR WNFEKFLVGP DGVPVMCWFH bmy_11237T0/1-219 FLKQSCPHPS ELMGSSKHIS WEPIMVHDIR WNFEKFLVGP DGVPVMRWFH BACU007845/1-192 FLKQSCPHPS ELMGSIKHIS WEPVMAHDIR WNFEKFLVGP DGVPVMRWFH 201 250 ENSP00000392398/1-221 RATVSSVKTD ILAYLKQFKT K ENSBTAP00000056156/1-219 RTPVSTVKTD ILAYMKQFKT K ENSTTRP00000014831/1-191 QAPVSTVKSD ILADLKQLKI K bmy_11237T0/1-219 QAPVSTVKSD ILAYLKQLKT K BACU007845/1-192 QAPVSTVKSD ILAYLKQLKT E