KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:09 2014 Check: 00 .. Name: bmy_18467T0/1-427 Len: 937 Check: 5783 Weight: 1.00 Name: ENSP00000359640/1-566 Len: 937 Check: 1515 Weight: 1.00 Name: BACU004606/1-837 Len: 937 Check: 9400 Weight: 1.00 Name: ENSTTRP00000001842/1-540 Len: 937 Check: 2170 Weight: 1.00 Name: ENSBTAP00000056190/1-538 Len: 937 Check: 5585 Weight: 1.00 // 1 50 bmy_18467T0/1-427 ---------- ---------- --------MA HLDSEVKEEC LREDLKFYFM ENSP00000359640/1-566 MARQPYRFPQ ARIPERGSGV FRLTVRNAMA HRDSEMKEEC LREDLKFYFM BACU004606/1-837 MARGVEALDL PVWSRASGPS RGPQCRGAMA HLDSEVKEEC LREDLKFYFM ENSTTRP00000001842/1-540 ---------- ---------- ------DAMA HLDSEVTEEC LREDLKFYFM ENSBTAP00000056190/1-538 ---------- ---------- --------MA HLDSEVKEEC LREDLRFYFM 51 100 bmy_18467T0/1-427 NPCEKFRARQ QIPWKMGLQI LKIVMVTTQL VRFGLSNQLV VAFKEENTVA ENSP00000359640/1-566 SPCEKYRARR QIPWKLGLQI LKIVMVTTQL VRFGLSNQLV VAFKEDNTVA BACU004606/1-837 NPCEKFRARQ QIPWKMGLQI LKIVMVTTQL VRFGLSNQLV VAFKEENTVA ENSTTRP00000001842/1-540 NPCEKFRARQ QIPWKMGLQI LKIVMVTTQL VRFGLSNQLV VAFKEENTVA ENSBTAP00000056190/1-538 NPCEKFRARQ QIPWKMGLQI LKIVMVTTQL IRFGLSNQLV VAFKEENTAA 101 150 bmy_18467T0/1-427 FKHLFLKGYS GVDEDEYSCS VYTQEDTYES IYFAISQASI LLNLSLGTLG ENSP00000359640/1-566 FKHLFLKGYS GTDEDDYSCS VYTQEDAYES IFFAINQYHQ LKDITLGTLG BACU004606/1-837 FKHLFLKGYS GVDEDEYSCS VYTQEDTYES IYFAISQASI LL-------- ENSTTRP00000001842/1-540 FKHLFLKGYS GVDEDEYSCS VYTQEDTYES IFFAISQFHR LRNLSLGTLG ENSBTAP00000056190/1-538 FKHLFLKGYS GSDEDDYSCS VYTQEDTYDS IFFAINQFHR LRNLSLGTLG 151 200 bmy_18467T0/1-427 YGENEDNRIG LKVCKQHYKK GTMFPSNETL NIDSDIEIAS CKLKSPFISK ENSP00000359640/1-566 YGENEDNRIG LKVCKQHYKK GTMFPSNETL NIDNDVELDC VQLDLQDLSK BACU004606/1-837 ---------- -----LHSPR ---------- ---------- ---------- ENSTTRP00000001842/1-540 YGKNEDNRIG LKVCKQHYKK GTMFPSNETL NIDSDIEIDC IHLDLQTLSK ENSBTAP00000056190/1-538 YGESEDNRIA LKVCKQHYKK GTMFPSNETL NIDSDIEIDC IHLDLEALSK 201 250 bmy_18467T0/1-427 ALTCRRFIPE S-YQTVTSFR IR-------- ---------- ---------- ENSP00000359640/1-566 K-------PP D-WKNSSFFR LEFYRLLQVE ISFHLKGIDL QTIHSRELPD BACU004606/1-837 --------PP DPLQEPS--G LEELIILQTG IL-------- ---------- ENSTTRP00000001842/1-540 N-------PQ D-WKNSSFFR LAFYRLLQVE ISFHLKGIDL QTIHSRELPD ENSBTAP00000056190/1-538 D-------PQ D-WKNSSFFR LEFYRLLQID ISFQLKGIDL QTIHSRELPD 251 300 bmy_18467T0/1-427 ------QIIF DNKAHSGKIK IYFDSDANIE ECKDLNISGS IQKNTQYVLV ENSP00000359640/1-566 CYVFQNTIIF DNKAHSGKIK IYFDSDAKIE ECKDLNIFGS TQKNAQYVLV BACU004606/1-837 ------SIIF DNKAHSGKIK IYFDSDANIE ECKDLNISGS IQKNTQYVLV ENSTTRP00000001842/1-540 CYIFQNTIIF DNKAHSGKIK IYFDSDANIE ECKDLNISGS IQKNTQYVLV ENSBTAP00000056190/1-538 CYVFQNMIIF DNKAHSGKIK IYFNSDAKIE ECKDLKISGS IQKNTQYVLV 301 350 bmy_18467T0/1-427 FDAFVIVICL ASLILCTRSI VLGLRLRKRF LDFFLEKYKR CVCDADQWEF ENSP00000359640/1-566 FDAFVIVICL ASLILCTRSI VLALRLRKRF LNFFLEKYKR PVCDTDQWEF BACU004606/1-837 FDAFVIVICL ASLILCTRSI VLGLRLRKRF LDFFLEKYKR CVCNADQWEF ENSTTRP00000001842/1-540 FDAFVIVICL ASLILCTRSI VLGLRLRKRF LNFFLEKYKR CVCNADQWEF ENSBTAP00000056190/1-538 FDAFVIVICL ASLILCTRSI VLALRLRKRF LKFFLEKYKR HVCNADQREF 351 400 bmy_18467T0/1-427 INRWYILVII SDLMTIIGSI LKMEIKAKNL TNYDLCSILL GTSTLFVWVG ENSP00000359640/1-566 INGWYVLVII SDLMTIIGSI LKMEIKAKNL TNYDLCSIFL GTSTLLVWVG BACU004606/1-837 INRWYILVII SDLMTIIGSI LKMEIKAKNL TNYDLCSILL GTSTLFVWVG ENSTTRP00000001842/1-540 INRWYILVIV SDLMSIIGSI LKMEIKAKNL TNYDLCSILL GTSTLFVWVG ENSBTAP00000056190/1-538 INQWYILVII SDLLTISGSV LKMEIKAKNL TNYNLCSILL GTSTLFVWVG 401 450 bmy_18467T0/1-427 VIRYLGYFQA YNVLILTMQA SLPKVLRFCA CAGMIYLGYT FCGWIVLGPY ENSP00000359640/1-566 VIRYLGYFQA YNVLILTMQA SLPKVLRFCA CAGMIYLGYT FCGWIVLGPY BACU004606/1-837 VIRYLGYFQA YNVLILTMQA SLPKVLRFCA CAGMIYLGYT FCGWIVLGPY ENSTTRP00000001842/1-540 VIRYLGYFQA YNVLILTMQA SLPKVLRFCA CAGMIYLGYT FCGWIVLGPY ENSBTAP00000056190/1-538 VIRYLGYFQA YNVLILTMQA SLPKVLRFCA CAGMIYLGYT FCGWIVLGPY 451 500 bmy_18467T0/1-427 HDK------- ---------- ---------- ---------- ---------- ENSP00000359640/1-566 HDKFENLNTV AECLFSLVNG DDMFATFAQI QQKSILVWLF SRLYLYSFIS BACU004606/1-837 HDKFENLNTV AECLFSLVNG DDMYATFAHI QQKSLLVWLF SRLYLYSFIS ENSTTRP00000001842/1-540 HDKFENLNTV AECLFSLVNG DDMYATFAHI QQKSLLVWLF SRLYLYSFIS ENSBTAP00000056190/1-538 HNKFENLNTV AECLFSLVNG DDMYATFAHI QQKSHLVWLF SRLYLYSFIS 501 550 bmy_18467T0/1-427 -----VCSLI LPSAHEALET LK-------- ---------- ------CGFP ENSP00000359640/1-566 LFIYMILSLF IALITDSYDT IKKFQQNGFP ETDLQEFLKE CSSKEEYQKE BACU004606/1-837 LFIYMILSLF IAIITDSYDT IK-------- -----EFLKE CGSKEKCQKE ENSTTRP00000001842/1-540 LFIYMILSLF IAIITDSYDT IKKYQQNGFP ATDLQEFLKE CGSKEKCQKE ENSBTAP00000056190/1-538 LFIYMILSLF IAIITDSYDT IKKYQQNGFP ATDLQEFLKE CSSKEKCQEE 551 600 bmy_18467T0/1-427 ALTFIPLFSS TYPGHQ---- ---------- ---------- ---------- ENSP00000359640/1-566 SSAFLSCICC RRRKRS---- ---------- ---------- ---------- BACU004606/1-837 SSSFLSCICC LRRGKAVSPD ERVKFPEVYK CHKSPVLHLG DQREQSLHDK ENSTTRP00000001842/1-540 SSAFLSCICC LRRNGS---- ---------- ---------- ---------- ENSBTAP00000056190/1-538 SPAFLSSICC LRRNRS---- ---------- ---------- ---------- 601 650 bmy_18467T0/1-427 ---------- ---------- ---------- ---------- ---------- ENSP00000359640/1-566 ---------- ---------- ---------- ---------- ---------- BACU004606/1-837 HCFTLHLSSL PKDVQFFSTM NECYYDKQMD FFYNKSNTDT ANEWTGTKLV ENSTTRP00000001842/1-540 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056190/1-538 ---------- ---------- ---------- ---------- ---------- 651 700 bmy_18467T0/1-427 ---------- ---------- ---------- ---------- ---------- ENSP00000359640/1-566 ---------- ---------- ---------- ---------- ---------- BACU004606/1-837 IVLCVGTFFC LFIFFSNSLV IAAVIKNRKF HFPFYYLLAN LAAADFFAGI ENSTTRP00000001842/1-540 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056190/1-538 ---------- ---------- ---------- ---------- ---------- 701 750 bmy_18467T0/1-427 ---------- ---------- ---------- ---------- ---------- ENSP00000359640/1-566 ---------- ---------- ---------- ---------- ----DDHLIP BACU004606/1-837 AYVYLMFNTG PVSKTLTVNR WFLRQGLLDT SLTASLTNLL VIAVERHMSI ENSTTRP00000001842/1-540 ---------- ---------- ---------- ---------- ----DDHLML ENSBTAP00000056190/1-538 ---------- ---------- ---------- ---------- ----DDHLIL 751 800 bmy_18467T0/1-427 ---------- ---------- ---------- ---------- ---------- ENSP00000359640/1-566 IS-------- ---------- ---------- ---------- ---------- BACU004606/1-837 MTMRVHSNLT KKRVTLLILF VWAIAIFMGA VPTLGWNCLC DISACSSLAP ENSTTRP00000001842/1-540 IN-------- ---------- ---------- ---------- ---------- ENSBTAP00000056190/1-538 IN-------- ---------- ---------- ---------- ---------- 801 850 bmy_18467T0/1-427 ---------- ---------- ---------- ---------- ---------- ENSP00000359640/1-566 ---------- ---------- ---------- ---------- ---------- BACU004606/1-837 IYSRSYLIFW TVSNLMAFFI MVVVYLRIYM YVKRKTNVLS PHTSGSISHR ENSTTRP00000001842/1-540 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056190/1-538 ---------- ---------- ---------- ---------- ---------- 851 900 bmy_18467T0/1-427 ---------- ---------- ---------- ---------- ---------- ENSP00000359640/1-566 ---------- ---------- ---------- ---------- ---------- BACU004606/1-837 RTPMKLMKTV MTVLGSQLCP NSSPGLEAET VSLQQHGMDP QKDIDVVLQE ENSTTRP00000001842/1-540 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056190/1-538 ---------- ---------- ---------- ---------- ---------- 901 950 bmy_18467T0/1-427 ---------- ---------- ---------- ------- ENSP00000359640/1-566 ---------- ---------- ---------- ------- BACU004606/1-837 SLTKEGSNKK NLPVNKAAPL EDFDIHAKCD IELEIQT ENSTTRP00000001842/1-540 ---------- ---------- ---------- ------- ENSBTAP00000056190/1-538 ---------- ---------- ---------- -------