KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:28:09 2014 Check: 00 .. Name: BACU017649/1-649 Len: 890 Check: 8767 Weight: 1.00 Name: ENSBTAP00000056195/1-803 Len: 890 Check: 3938 Weight: 1.00 Name: bmy_04549T0/1-859 Len: 890 Check: 8379 Weight: 1.00 Name: ENSTTRP00000015274/1-747 Len: 890 Check: 650 Weight: 1.00 // 1 50 BACU017649/1-649 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056195/1-803 MHGGRSRSPR TRREPSSGEE AAPVTAMAAE SALQVVEKLQ ARLATNADPK bmy_04549T0/1-859 ---------- ---------- ------MAAE SALQVVEKLQ ARLAANPDPK ENSTTRP00000015274/1-747 ---------- ---------- ---------- ---------- ---------- 51 100 BACU017649/1-649 ---------- ---------- MEGHGHAHRA ARK------- ---------- ENSBTAP00000056195/1-803 KLLKYLKKLS ALPITVDILA ETGVGKTVNS LRKHEHVGNF ARDLVAQWKK bmy_04549T0/1-859 KLLKYLKKLS TLPITVDILA ETGVGKTVNS LRKHEHVGSF AKDLVAQWKK ENSTTRP00000015274/1-747 -LLKYLKKLS TLPITVDILA ETGVGKTVNS LRKHEHVGSF AKDLVAQWKK 101 150 BACU017649/1-649 ---------- -----DRSHG R--------- ---------- ---------- ENSBTAP00000056195/1-803 LVPVERTTEP EEQNFEKSSS RKRPRDALRE EAEIEGDYPE SWKASSSQSC bmy_04549T0/1-859 LVPVERNTEP DEQDFEKSNS RKRPRDALKE EEEVEGDYPE SWKASGSQSF ENSTTRP00000015274/1-747 LVPVERNTEP DEQDFEKTNS RKRPRDALKE GEG-EGDYPG SWRASGSQSC 151 200 BACU017649/1-649 --EHRPELHR HPSELVRPCH GSHGRERGED RRRCRGRSPV YSSERGSSGY ENSBTAP00000056195/1-803 SPDNRQKKHR KLPELERPHK VSHSHGRRDE RKRYHRASPV YSSDHESSDY bmy_04549T0/1-859 SPDNRQKKHR KLSELERPHK VSHSHERRDE RKRYHRVSPV YSSDHESSDY ENSTTRP00000015274/1-747 SPDNRQKKHR KLPELDRPHK VSHSHETRDE RKRYHRASPV YSSDHESSDY 201 250 BACU017649/1-649 S--RSPPQSM HPCLMYGDCH RRLAEAR--- VAQQRPGEGP SDAPRARLEL ENSBTAP00000056195/1-803 GHVQSPPPST SPHHMSLDHY RPLEEDHEPF VPHQKPGKGH SNAFQDRLGV bmy_04549T0/1-859 GHVQSPLSSA SPHQMSVDHY RSLEEDHEPF VSHQKPGKGH SNAFQDRLGV ENSTTRP00000015274/1-747 GHVQSPLSSA SPHQMSVDHY RSLEEDHEPF VSHQKPGKGH SNAFQDRLGV 251 300 BACU017649/1-649 GRNHRLGAPQ GRGAGSLSRG HQPPHRDERL VGTKVHEKSS ALTRRKSGLA ENSBTAP00000056195/1-803 SQERHLGEAQ GRESTSQSKE HRSSHKEKRP ADARGDEKSS -LIKEKSHKV bmy_04549T0/1-859 SQERHLGEAQ GKEVVSQSKE HRSSHKEKRP VNAKGDEKSS -LSREKSHKA ENSTTRP00000015274/1-747 SQERHLGEAQ GKEVVSQSKE HRSSHKEKRP VNSKGDEKSS -LSREKSHKA 301 350 BACU017649/1-649 FSREE-RLQS LSRASANENP PSSGVEKEKE REGRG-IQFL PPFRQASD-- ENSBTAP00000056195/1-803 VSKEE-NRRP TSGDSTKEKP PS-GVRKEKE KEGSAKKKVL PPLEVASDNH bmy_04549T0/1-859 ISKEENRRRP PSGDSTKEKP PSSGVKKEKE KEGST-KKVL PPLEVASDNH ENSTTRP00000015274/1-747 ISKEENRRRP PSGDSTKEKA PSSGVKKEKE KEGST-KKLL PPLEVASDNH 351 400 BACU017649/1-649 LKKRKHEDSE KTKPDKNKQS PDRLDIAEGA RGLLPKVKEK VSNNQKVQEG ENSBTAP00000056195/1-803 LKKPKPRDSE KTKSDKNKHS LENSDMGKGA GDLLPKAKEK VSNNLKTQEG bmy_04549T0/1-859 LKKPKYRDPE KTKPDKNKQS LESLDIGKGA GDLLPKAKEK VSNNLKTQEG ENSTTRP00000015274/1-747 LKKPKYRDPE KTKSDKNKQS LESLDTGKGA GDLLPKAKEK VSNNLKAQEG 401 450 BACU017649/1-649 KVRPPHLDGK PEGSLPKGEE ADMDNEFKPP TMSSESYFNH NQPREKKKKI ENSBTAP00000056195/1-803 KVKLSHSDRK SVASFPKGEE ADSDDEFEKP TMSFESYLSY DQPRKKKKKI bmy_04549T0/1-859 KVKPSHSDRK SVGSFLKAEE ADMDDEFEQP TMSFESYLSY DQPRKKKKKI ENSTTRP00000015274/1-747 KVKPSHLDRK SVGSFLKAEE ADMDDEFEQP TMSFESYLSY DQPRKKKKKI 451 500 BACU017649/1-649 MKTSATALEE KGPKKNDSR- --ENLDLVQE LPKVNENRSE KLQPSGNVWA ENSBTAP00000056195/1-803 VKTSTTTPGE KGLKKNDSKS TSKNLDSVHK LPKVNENKPE KLPPVGADSA bmy_04549T0/1-859 VKTSTTTPGE KGFKKHDSKS TSKNLDSVQK LPKVNENKSE KLPPAGSHSA ENSTTRP00000015274/1-747 VKTSTTTPGE KGLKKNDSKS TSKNLDSVQK LPKVNENKSE KLQPAGSHSA 501 550 BACU017649/1-649 KLEKVPTDA- PVWPDLPLPR VQANDRPLLA SGLMSSLRPK QKALSSPQEE ENSBTAP00000056195/1-803 KLKKVPSDVL PVLPDLPLPV IQANYRPLPS PELMSSFQPK RKALSSPQEE bmy_04549T0/1-859 KLKKVPSDVL PVLPDLPLPV IQANYRPLPS LELMSAFQPK RKALSSPQEE ENSTTRP00000015274/1-747 KLKKVPSDVL PVLPDLPLPV IQANYRPLPS LELISAFQPK RKALSSSQEE 551 600 BACU017649/1-649 EEVGFTGCRM NSKMQVFSGS KCAYLAKMMT LRQQCIWVLR NSINSIFKVG ENSBTAP00000056195/1-803 EEAGFTGRRM NSKMQVYSGS KCAYLPKMMT LHEQCIRVLK NNIDCKSRAS bmy_04549T0/1-859 EEAGFTGRRM NSKMQVYSGS KCAYLPKMMT LHEQCIRVLK NNIDSIFEVG ENSTTRP00000015274/1-747 EEAGFTGRRM NSKMQVYSGS KCAYLPKMMT LHEQCIRVLK NNIDSIFEVG 601 650 BACU017649/1-649 -GVPYSVLEP ILESCAPDQL YRIEKYNHAL VQETDKLWKI HSHQHFRKER ENSBTAP00000056195/1-803 LLLPGTLGHW VMERCTPDQL YRIEEYNHVL IEETDQLWKV HCHRDFKDER bmy_04549T0/1-859 -GVPYSVLEP VLERCTPDQL YRIEEYNHVL IEDTDQLWKV HCHRDFKDER ENSTTRP00000015274/1-747 -GVPYSLLEP VLERCTPDQL YRIEEYNHVL IEETDQLWKV HCHRDFKDER 651 700 BACU017649/1-649 PKEHETWREM YMRLQDAREQ RLQALTVNIQ SAQANKPK-- ---------- ENSBTAP00000056195/1-803 PEEYESWREM YLRLQDAREQ RLRVLTKNIR SAHANKPK-- ---------- bmy_04549T0/1-859 PEEYESWREM YLRLQDAREQ RLRVLTKNIR SAHANKPKGK GAAWVWQNSE ENSTTRP00000015274/1-747 PEEYESWREM YLRLQDAREQ RLRLLTKNIR SAHANKPK-- ---------- 701 750 BACU017649/1-649 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056195/1-803 ---------- ---------- ---------- ---------- ---------- bmy_04549T0/1-859 PCALVNSRAV VGSAKVSSLA PKSLLHLQKR AKGEVFLLPL CMLPYRGVSR ENSTTRP00000015274/1-747 ---------- ---------- ---------- ---------- ---------- 751 800 BACU017649/1-649 ---------- ---------- --GRQAKMIL LNSLARPPSD VRRRQEKFEI ENSBTAP00000056195/1-803 ---------- ---------- --GRQAKMAF VNSVAKPPRD VRRRQEKFGT bmy_04549T0/1-859 VDNPLPLAPQ LKKAGINLHF SAGRQAKMAF VNSVAKPPRD VRRRQEKFGT ENSTTRP00000015274/1-747 ---------- ---------- --GRQAKMAF VNSVAKPPRD VRRRQEKFGT 801 850 BACU017649/1-649 GEAAAPEKVK IKPALYPTGT IH---TPSSR NSLNLTHEKP AGACSSTTST ENSBTAP00000056195/1-803 GGAAVPEKIR IKPAPYPTGS SRASFSSGSS NSFNASPEEP AYDGPSTSGA bmy_04549T0/1-859 GGAAVPEKIR IKPAPYLSGS SR--LGSGGS NSFNASPEEP AYDGPSTSSA ENSTTRP00000015274/1-747 GGAAVPEKIR IKPAPYLSGS S----AWAGS NSFNASPEEP AYDGPSTSSA 851 900 BACU017649/1-649 HLPRVVSG-- ----RKP-VK KITPMMAKTI KDFKNRFSRW ENSBTAP00000056195/1-803 HPAPVVSSTV SYDPRKPAVK KIAPMMAKTI KAFKNRFSRR bmy_04549T0/1-859 HSAPVVSSTV SCDPRKPTVK KIAPMMAKTI KAFKNRFSRR ENSTTRP00000015274/1-747 HSAPVVSSTV SCDPRKPTVK KIAPMMAKTI KAFKNRFSRR