KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:28:14 2014  Check: 00 ..

 Name: bmy_13608T0/1-85          Len:    134  Check:  8362  Weight:  1.00
 Name: ENSP00000349669/1-134     Len:    134  Check:  8642  Weight:  1.00
 Name: ENSTTRP00000012811/1-69   Len:    134  Check:  2584  Weight:  1.00
 Name: ENSBTAP00000056234/1-133  Len:    134  Check:  5262  Weight:  1.00

//


                          1                                                   50
bmy_13608T0/1-85          MASGKDTCPI LPKLTNNCSD ENSYKPAIKC GEIHLPRFSL KQGMIPRRYV 
ENSP00000349669/1-134     MASGKDTCPT LPKLTNNCSD ESLYKSANKY EEIHLPRFSL KQGMIPRRYV 
ENSTTRP00000012811/1-69   ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000056234/1-133  MASGKDTCPI LPKLTNNCSD ENSDKLANKC -EIHLPRFSL KQGMIPRHYV 


                          51                                                 100
bmy_13608T0/1-85          MPWKQNMKFR NVNLKVPKHC --------DF PWLQEATCLM KEE------- 
ENSP00000349669/1-134     MPWKENMIFR NVNLKQAEVC GIHTGPLEDS LFLNHSERLC HGEDRKVVFQ 
ENSTTRP00000012811/1-69   ---------- -----HAEAC GIHAGPLEDS LFLNHSERLC HGEDRKVVLK 
ENSBTAP00000056234/1-133  MPWKQNMKFR NVNLKHAEAC GIHAGPLEDS LFLDHSERLC HGEDRKVVLK 


                          101                                                150
bmy_13608T0/1-85          ---------- ---------- ---------- ---- 
ENSP00000349669/1-134     KGPPEIKIAD MPLHSPLSRY QSTVISHGFR RRLV 
ENSTTRP00000012811/1-69   KIPPEIKIAD MPLHSPLSKY QSTVISHGFR RRLI 
ENSBTAP00000056234/1-133  KGPPEIKIAD MPLHSPLSRY QSTVISHGFR RRLI