KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:28:16 2014 Check: 00 .. Name: BACU012264/1-339 Len: 340 Check: 2662 Weight: 1.00 Name: ENSP00000313324/1-247 Len: 340 Check: 6410 Weight: 1.00 Name: bmy_07620T0/1-246 Len: 340 Check: 4066 Weight: 1.00 Name: ENSBTAP00000056270/1-201 Len: 340 Check: 3762 Weight: 1.00 // 1 50 BACU012264/1-339 MXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000313324/1-247 ---------- ---------- ---------- ---------- ---------- bmy_07620T0/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056270/1-201 ---------- ---------- ---------- ---------- ---------- 51 100 BACU012264/1-339 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000313324/1-247 ---------- ---------- ---------- ---------M WGPGVTAEGL bmy_07620T0/1-246 ---------- ---------- ---------- ---------M WGPGVTAEGL ENSBTAP00000056270/1-201 ---------- ---------- ---------- ---------- ---------- 101 150 BACU012264/1-339 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000313324/1-247 SVAPAPPPLL PLLLLLALAL VAPSRGGGGC AELACGERER CCDATNATAV bmy_07620T0/1-246 SVAPAPPPLL PLLLLLALAL VAPSRGGGGC AELACGERER CCDAANATAV ENSBTAP00000056270/1-201 ---------- ---------- ---------- ----CGERER CCDAANATAV 151 200 BACU012264/1-339 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000313324/1-247 RCCKLPLHAF LDNVGWFVRK LSGLLILLVL FAIGYFLQRI ICPSPRRYPR bmy_07620T0/1-246 RCCKLPLHAF LDNVGWFVRK LSGLLILLVL FAIGYFLQRI ICPSPRRYPR ENSBTAP00000056270/1-201 RCCKLPLHAF LDNVGWFVRK LSGLLILLVL FAIGYFLQRI ICPSPRRYPR 201 250 BACU012264/1-339 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXDSLLD ENSP00000313324/1-247 GQARPGQRPG PPGGAGPLGG AGPPDD--DD DSPALLRDEA AAGSQDSLLD bmy_07620T0/1-246 GQA----RPG PPGGAGQPGA PRPPDDNDDD DSPALLRDEA AAGSQDSLLD ENSBTAP00000056270/1-201 GQA----RPG PPGGAGQPGA AGPPDD-EDD DSPELLRDEV AAGSQDSLLD 251 300 BACU012264/1-339 S-GGGGRGRA GGGRSAPSCA SEHELRVVSP VFLQLPSYEE VKYLPTYEES ENSP00000313324/1-247 S-GGGGRGRG GGGRSDPSCA SEHEMRVVSP VFLQLPSYEE VKYLPTYEES bmy_07620T0/1-246 S-GGGGRGRA GGGRSAPSCA SEHELRVVSP VFLQLPSYEE VKYLPTYEES ENSBTAP00000056270/1-201 SGGGGGRGRA GGGRSAPSCA SEHELRVVSP VFLQLPSYEE VKYLPTYEES 301 350 BACU012264/1-339 MRLQQLSPGE VVLPVSVLGH PRGGGAGESD GGGEVRFPLI ENSP00000313324/1-247 MRLQQLSPGE VVLPVSVLGR PRGGVAAEPD -GGEGRYPLI bmy_07620T0/1-246 MRLQQLSPGE VVLPVSVLGR PRGGGAGESD GGGEGRFPLI ENSBTAP00000056270/1-201 MRLQQLSPGE VVLPVSVLGR PRGGGAGESD GGGEGRFPLI