KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:17 2014 Check: 00 .. Name: ENSTTRP00000012340/1-400 Len: 495 Check: 1602 Weight: 1.00 Name: ENSP00000359976/1-405 Len: 495 Check: 9374 Weight: 1.00 Name: ENSBTAP00000056275/1-417 Len: 495 Check: 1156 Weight: 1.00 Name: bmy_16906T0/1-404 Len: 495 Check: 7626 Weight: 1.00 Name: BACU009947/1-495 Len: 495 Check: 1184 Weight: 1.00 // 1 50 ENSTTRP00000012340/1-400 MQEKDASPHG FLPRFQHFAT QAIHVGQEPE QWTSHAVVPP ISLSTTFKQG ENSP00000359976/1-405 MQEKDASSQG FLPHFQHFAT QAIHVGQDPE QWTSRAVVPP ISLSTTFKQG ENSBTAP00000056275/1-417 MQEKEASPHG FLPRFQHFAT QAIHVGQEPE QWTSQAVVPP ISLSTTFKQG bmy_16906T0/1-404 MQEKDASPHG FLPRFQHFAT QAIHVGQEPE QWTSQAVVPP ISLSTTFKQG BACU009947/1-495 MQEEDASPRG FLPRFQHFAT QAIHVGQEPE QWTSQAVVPP ISLSTTFKQG 51 100 ENSTTRP00000012340/1-400 APGRHLGFEY SRSGNPTRNC LEKAVAALDG AKYSLAFASG LAATVTVTHL ENSP00000359976/1-405 APGQHSGFEY SRSGNPTRNC LEKAVAALDG AKYCLAFASG LAATVTITHL ENSBTAP00000056275/1-417 APGQHSGFEY SRSGNPTRNC LEKAVAALDG AKYSLAFASG LAATVTITHL bmy_16906T0/1-404 APGRHLGFEY SRSGNPTRNC LEKAVAALDG AKYSLAFASG LAATVTVTHL BACU009947/1-495 APGRHLGFEY SRSGNPTRNC LEKAVAALDG AKYSLAFASG LAATVTITHL 101 150 ENSTTRP00000012340/1-400 LKAGDQIICM DDVYGGTNRY FRQVATEFGL KISFVDCSKT KLLEAAITPE ENSP00000359976/1-405 LKAGDQIICM DDVYGGTNRY FRQVASEFGL KISFVDCSKI KLLEAAITPE ENSBTAP00000056275/1-417 LKAGDQIICM DDVYGGTNRY FRQVATEFGL KISFVDCSKP KLLEAAITPE bmy_16906T0/1-404 LKAGDQIICM DDVYGGTNRY FRQVATEFGL KISFVDCSKT KLLEAAITPE BACU009947/1-495 LKAGDQIICM DDVYGGTNRY FRQVATEFGL KISFVDCSKT KLLEAAITPE 151 200 ENSTTRP00000012340/1-400 TKLVWIETPT NPILKMIDIE ACAHTVHKHG DIILVVDNTF MSAYFQRPLA ENSP00000359976/1-405 TKLVWIETPT NPTQKVIDIE GCAHIVHKHG DIILVVDNTF MSPYFQRPLA ENSBTAP00000056275/1-417 TKLVWIETPT NPSLKMIDIE ACAHTVHKHG DIILVVDNTF MSAYFQRPLS bmy_16906T0/1-404 TKLVWIETPT NPILKMIDIE ACAHTVHKHG DIILVVDNTF MSAYFQRPLA BACU009947/1-495 TKLVWIETPT NPILKMIDIE ACAHTVHKHG DIILVVDNTF MSAYFQRPLA 201 250 ENSTTRP00000012340/1-400 LGADICMYSA TKYMNGHSDV VMGLVSLNSE RLHDRLRFLQ NSL-AVPS-L ENSP00000359976/1-405 LGADISMYSA TKYMNGHSDV VMGLVSVNCE SLHNRLRFLQ NSLGAVPSPI ENSBTAP00000056275/1-417 LGADICMYSA TKYMNGHSDV VMGLVSLNSE SLHDRLRFLQ NSLGAVPSPI bmy_16906T0/1-404 LGADICMYSA TKYMNGHSDV VMGLVSLNSE RLHNRLRFLQ NSLGAVPSPV BACU009947/1-495 LGADICMYSA TKYMNGHSDV VMGLVSLNSE RLHNRLRFLQ NSLGAVPSPV 251 300 ENSTTRP00000012340/1-400 DCY-CNR--L TLQIRMEXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000359976/1-405 DCYLCNRGLK TLHVRMEKHF KNGMAVAQFL ESNPWVEKVI YPGLPSHPQH ENSBTAP00000056275/1-417 DCYLCNRGLK TLQVRMEKHF ENGMAVAQFL ESNPQVEKVI YPGLPSHPQH bmy_16906T0/1-404 DCYLCNRGLK TLQIRMEKHF ENGMAVAQFL ESNPRVEKVI YPGLPSHPQH BACU009947/1-495 DCYLCNRGLK TLQIRMEKHF ENGMAVAQFL ESNPRVEKVI YPGLPSHPQH 301 350 ENSTTRP00000012340/1-400 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXLFTLAES LGGYESLAEL ENSP00000359976/1-405 ELVKRQCTGC TGMVTFYIKG TLQHAEIFLK NLKLFTLAES LGGFESLAEL ENSBTAP00000056275/1-417 ELAKRQCTGC PGMVTFYIKG SLQHAETFLQ NLKLFTLAES LGGYESLAEL bmy_16906T0/1-404 ELAKRQCTGC PGMIAFYIKG SLQHAETFLK NLKLFTLAES LGGYESLAEL BACU009947/1-495 ELAKRQCTGC PGMITFYIKG SLQHAETFLK NLKLFTLAES LGGYESLAEL 351 400 ENSTTRP00000012340/1-400 PAIMTHASVP KSDREVLGIS DTLIRLSVGL EDKQDLLDDL DQALKAAHS- ENSP00000359976/1-405 PAIMTHASVL KNDRDVLGIS DTLIRLSVGL EDEEDLLEDL DQALKAAHP- ENSBTAP00000056275/1-417 PAIMTHASVP KSDREVLGIS DTLIRLSVGL EDKQDLLDDL DQALKAAVS- bmy_16906T0/1-404 PAIMTHASVP NSDREVLGIT DTLIRLSVGL EDKQDLLDDL DQALKAAYT- BACU009947/1-495 PAIMTHASVP NSDREVLGIS DTLIRLSVGL EDKQDLLDDL DQALKAAYIE 401 450 ENSTTRP00000012340/1-400 ---------- ---------- ---------- PNASHK---- ---------- ENSP00000359976/1-405 ---------- ---------- ---------- PSGSHS---- ---------- ENSBTAP00000056275/1-417 ---------- ---------- -FVLVCVCVC VCVCRRVCA- ---------- bmy_16906T0/1-404 ---------- ---------- ---------- ECINV----- ---------- BACU009947/1-495 SLKIEISPEL REALLFFESE FLSLVFTIIC QNLTHPLQAS SNHLPIKPSL 451 500 ENSTTRP00000012340/1-400 ---------- ---------- ---------- ---------- ----- ENSP00000359976/1-405 ---------- ---------- ---------- ---------- ----- ENSBTAP00000056275/1-417 ---------- ---------- ---------- ---------- ----- bmy_16906T0/1-404 ---------- ---------- ---------- ---------- ----- BACU009947/1-495 FFLAGNNFSP LTQGNKPKSY MRNTSVMGGD TEELLGTKIQ DPLVT