KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:28:18 2014 Check: 00 .. Name: ENSBTAP00000056291/1-687 Len: 689 Check: 4738 Weight: 1.00 Name: ENSP00000415822/1-689 Len: 689 Check: 9621 Weight: 1.00 Name: bmy_19150T0/1-688 Len: 689 Check: 5683 Weight: 1.00 Name: BACU016011/1-446 Len: 689 Check: 3119 Weight: 1.00 // 1 50 ENSBTAP00000056291/1-687 MKPVHERSQE CLPPKKRDLP VTSEDMGRTT SCSTNHTPSS DASEWSRGVV ENSP00000415822/1-689 MKPVHERSQE CLPPKKRDLP VTSEDMGRTT SCSTNHTPSS DASEWSRGVV bmy_19150T0/1-688 MKPVHERSQE CLPPKKRDLP VTSEDMGRTT SCSTNHTPSS DASEWSRGVV BACU016011/1-446 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000056291/1-687 VAGQSQAGAR VSLGGDGAEA ITGLTVDQYG MLYKVAVPPA TFSPTGLPSV ENSP00000415822/1-689 VAGQSQAGAR VSLGGDGAEA ITGLTVDQYG MLYKVAVPPA TFSPTGLPSV bmy_19150T0/1-688 VAGQSQAGAR VSLGGDGAEA ISGLTVDQYG MLYKVAVPPA TFSPTGLPSV BACU016011/1-446 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000056291/1-687 VNMSPLPPTF NVASSLIQHP GIHYPPIHYA QLPSTSLQFI GSPYSLPYAV ENSP00000415822/1-689 VNMSPLPPTF NVASSLIQHP GIHYPPLHYA QLPSTSLQFI GSPYSLPYAV bmy_19150T0/1-688 VNMSPLPPTF NVASSLIQHP GIHYPPIHYA QLPSTSLQFV GSPYSLPYAV BACU016011/1-446 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000056291/1-687 PPNFLPSPLL SPSANLATSH LPHFVPYASL LAEGATPPP- ASSPAHSFSK ENSP00000415822/1-689 PPNFLPSPLL SPSANLATSH LPHFVPYASL LAEGATPPPQ APSPAHSFNK bmy_19150T0/1-688 PPNFLPSPLL SPSANLATSH LPHFVPYASL LAEGATPPPQ ASSPAHSFNK BACU016011/1-446 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000056291/1-687 APSASSPPGQ LPHHSSTQPL DLAPGRMPIY YQMSRLPAGY TLHETAPAGA ENSP00000415822/1-689 APSATSPSGQ LPHHSSTQPL DLAPGRMPIY YQMSRLPAGY TLHETPPAGA bmy_19150T0/1-688 APSATSPPGQ LPHHSSTQPL DLAPGRMPIY YQMSRLPAGY TMHETPPAGA BACU016011/1-446 ---------- ---------- ---------- ---------- -MHETPPAGA 251 300 ENSBTAP00000056291/1-687 SPVLTPQEGQ PALEAAAAN- GQRPRDRNLV RRESEALDSP SNKGEGQGLA ENSP00000415822/1-689 SPVLTPQESQ SALEAAAANG GQRPRERNLV RRESEALDSP NSKGEGQGLV bmy_19150T0/1-688 SPVLTPQEGQ SALEAAAAN- GQRQRERNLV RRESEALDSP NSKGEGQGLV BACU016011/1-446 SPGLTPQEGQ SALEAAAAN- GQRQRERNLM RRESEALDSP NSKGEGQGLV 301 350 ENSBTAP00000056291/1-687 PVVECMVDGQ LFSGSQSARV EVAVPAHRGT PDTDLEVQRV VGALASQDYR ENSP00000415822/1-689 PVVECVVDGQ LFSGSQTPRV EVAAPAHRGT PDTDLEVQRV VGALASQDYR bmy_19150T0/1-688 PVVECVVDGQ LFSGSQTARV EVAVPAHRGT PDTDLEVQRV VGALASQDYR BACU016011/1-446 PVVECVVDGQ LFSGSQTARV EVAVPAHRGT PDTDLEVQRV VGALASQDYR 351 400 ENSBTAP00000056291/1-687 AVAAQRKDEP SPLNLSHHNP DHQGGGRGPA RSAAEMAEKN QARGVSPHSH ENSP00000415822/1-689 VVAAQRKEEP SPLNLSHHTP DHQGEGRGSA RNPAELAEKS QARGFYPQSH bmy_19150T0/1-688 VVAAQRKGEP SPLNLSHHNP DHQGEGRGSA RNAAEMAEKN QARGFYPQSH BACU016011/1-446 VVAAQRKGEP SPLNLSHHNP DHQGEGRGSA RNAAEMAEKN QARGFYPQSH 401 450 ENSBTAP00000056291/1-687 QEPLKHRPFP KAVVVANGNL VPAGTDPGLL PVGSEILVAS SLDIQARATF ENSP00000415822/1-689 QEPVKHRPLP KAMVVANGNL VPTGTDSGLL PVGSEILVAS SLDVQARATF bmy_19150T0/1-688 QEPLKHRPLP KAMVVANGNL VPTGTDPSLL PMGSEILVAS SLDMQARAAF BACU016011/1-446 QEPLKHRPLP KAMVVANGNP VPTGTDPSLL PMGSEILVAS SLDMQARAAF 451 500 ENSBTAP00000056291/1-687 PDKESTLPPV TSSHLPSHFM KGAIIQLATG ELKRVEDLQT QDFVRSAEVS ENSP00000415822/1-689 PDKEPTPPPI TSSHLPSHFM KGAIIQLATG ELKRVEDLQT QDFVRSAEVS bmy_19150T0/1-688 PDKESTPPPF TSSHLPSHFM KGAIIQLATG ELKRVEDLQT QDFVRSAEVS BACU016011/1-446 PDKESTPPPF TSSHLPSHFM KGAIIQLATG ELKRVEDLQT QDFVRSAKVS 501 550 ENSBTAP00000056291/1-687 GGLKIDSSTV VDIQESQWPG FVMLHFVVGE QQSKVSIEVP PEHPFFVYGQ ENSP00000415822/1-689 GGLKIDSSTV VDIQESQWPG FVMLHFVVGE QQSKVSIEVP PEHPFFVYGQ bmy_19150T0/1-688 GGLKIDSSTV VDIQESQWPG FVMLHFVVGE QQSKVSIEVP PEHPFFVYGQ BACU016011/1-446 GGLKIDSSTV VDIQESQWPG FVMLHFVVGE QQSKVSIEVP PEHPFFVYGQ 551 600 ENSBTAP00000056291/1-687 GWSSCSPGRT AQLFSLPCHR LQVGDVCISI SLQSLNSNSV SQSSCAPPGQ ENSP00000415822/1-689 GWSSCSPGRT TQLFSLPCHR LQVGDVCISI SLQSLNSNSV SQASCAPPSQ bmy_19150T0/1-688 GWSSCSPGRT AQLFSLPCHR LQVGDVCISI SLQSLNSHSV SQSSCAPPGQ BACU016011/1-446 GWSSCSPGRT AQLFSLPCHR LQVGDVCI-I SLQSLNSHSV SQSSCAPPGQ 601 650 ENSBTAP00000056291/1-687 LGPPRERPER TVLGPREQCD SDGKSQPSGE GSRSVEPSQP EPGAQACWSA ENSP00000415822/1-689 LGPPRERPER TVLGSRELCD SEGKSQPAGE GSRVVEPSQP ESGAQACWPA bmy_19150T0/1-688 LVPPRERPER TVLGPREQCD SDGKSQPLGE GSRMVEPLQP EPGAQACWPA BACU016011/1-446 LAPPRERPER TVLGPREQCD SDGKSQPLGE GSRMVEPLQP EPGAQACWPA 651 700 ENSBTAP00000056291/1-687 PSFQRYSTQG EEARAALLRP SFIPQEVKLS IEGRSNAGK ENSP00000415822/1-689 PSFQRYSMQG EEARAALLRP SFIPQEVKLS IEGRSNAGK bmy_19150T0/1-688 PSFQRYGMQG EEARAALLRP SFIPQEVKLS IEGRSNAGK BACU016011/1-446 PSFQRYGMQG EEARAALLRP SFIPQEVKLS IEGRSNAGK