KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:28:20 2014 Check: 00 .. Name: ENSBTAP00000056313/1-475 Len: 550 Check: 9397 Weight: 1.00 Name: bmy_02233T0/1-540 Len: 550 Check: 9451 Weight: 1.00 Name: BACU011639/1-475 Len: 550 Check: 7784 Weight: 1.00 Name: ENSTTRP00000001490/1-475 Len: 550 Check: 5953 Weight: 1.00 // 1 50 ENSBTAP00000056313/1-475 ---------- ---------- ---------- ---------- ---------- bmy_02233T0/1-540 PSAEPWARLR SGGNPGVAAS GRGVSTGAAP RGTPAAPPEL QAAPPPAPKG BACU011639/1-475 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001490/1-475 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000056313/1-475 ---------- ---------- ----MPKLEG FEFWSRTLGG ARHVVAPMVD bmy_02233T0/1-540 VAASGGASAW LGRSGGPGPP NVETMPKLQG FEFWSCTLGG ARHVVAPMVD BACU011639/1-475 ---------- ---------- ----MPKLQG FEFWSCTLGG ARHVVAPMVD ENSTTRP00000001490/1-475 ---------- ---------- ----MPKLQG FEFWSCTLGG ARHVVAPMVD 101 150 ENSBTAP00000056313/1-475 QSELAWRLLS RRHGAHLCYT PMLHAQVFVR DANYRKENLY CDVCPEDRPL bmy_02233T0/1-540 QSELAWRLLS RRHGAQLCYT PMLHAQVFIR DANYRKENLY CDVCPEDRPL BACU011639/1-475 QSELAWRLLS RRHGAQLCYT PMLHAQVFIR DANYRKENLY CDVCPEDRPL ENSTTRP00000001490/1-475 QSELAWRLLS RRHGAQLCYT PMLHAQVFIR DANYRKENLY CDVCPEDRPL 151 200 ENSBTAP00000056313/1-475 IVQFCANDPE VFVQAALLAQ DYCDAIDLNL GCPQMIAKRG HYGAFLQEEW bmy_02233T0/1-540 IVQFCANDPE VFVQAALLAQ DYCDAIDLNL GCPQMIAKRG HYGAFLQEEW BACU011639/1-475 IVQFCANDPE VFVQAALLAQ DYCDAIDLNL GCPQMIAKRG HYGAFLQEEW ENSTTRP00000001490/1-475 IVQFCANDPE VFVQAALLAQ DYCDAIDLNL GCPQMIAKRG HYGAFLQEEW 201 250 ENSBTAP00000056313/1-475 DLLQRMRTWG HMVVGCPVTC KIRVFPEIDK TVRYAQMLEK AGCQLLTVHG bmy_02233T0/1-540 DLLQRMILLA HEKLSVPVTC KIRVFPEIDK TVRYAQMLEK AGCQ--GCGG BACU011639/1-475 DLLQRMILLA HEKLSVPVTC KIRVFPEIDK TVRYAQMLEK AGCQLLTVHG ENSTTRP00000001490/1-475 DLLQRMILLA HEKLSVPVTC KIRVFPEIDK TVRYAQMLEK AGCQLLTVHG 251 300 ENSBTAP00000056313/1-475 RTK-EQKGPL SGTASWEHIK AVRKAVTIPV FANGNIQCLR DVERCIQDTG bmy_02233T0/1-540 KQHPSERLPI --------LF PDRKAVAIPV FANGNIQCLR DVERCIQDTG BACU011639/1-475 RTK-EQKGPL SGTASWEHIK AVRKAVAIPV FANGNIQCLR DVERCIQDTG ENSTTRP00000001490/1-475 RTK-EQKGPL SGTASWEHIK AVRKAVAIPV FANGNIQCLR DVERCIQDTG 301 350 ENSBTAP00000056313/1-475 VQGVMSAEGN LHNPALFEGR SPAVWELAEE YLDIVRQHPC PLSYVRAHLF bmy_02233T0/1-540 VQGVMSAEGN LHNPALFEGR SPAVWELAEE YLDIVRQHPC PLSYVRAHLF BACU011639/1-475 VQGVMSAEGN LHNPALFEGR SPAVWELAEE YLDIVRQHPC PLSYVRAHLF ENSTTRP00000001490/1-475 VQGVMSAEGN LHNPALFEGR SPAVWELAEE YLDIVRQHPC PLSYVRAHLF 351 400 ENSBTAP00000056313/1-475 KLWHHTLQVH QQLREELAKV KTLEGIAAVS QELKLRCQED ISRQKEGEKP bmy_02233T0/1-540 KLWHHTLQVH QQLREELAKV KTLEGIAAVS QDLKLRCQED ISRQKEGEKP BACU011639/1-475 KLWHHTLQVH QQLREELAKV KTLEGIAAVS QDLKLRCQED ISRQKEGEKP ENSTTRP00000001490/1-475 KLWHHTLQVH QQLREELAKV KTLEGIAAVS QELKLRCQED ISRQKEGEKP 401 450 ENSBTAP00000056313/1-475 SGGLPFFHWI CQPYFRPGPK EGSKENGGAR SKRALEEEEG TTDVLSKNKQ bmy_02233T0/1-540 SGGLPFFHWI CQPYFRPGPR EGSKESGGAR SKRALEEEEG STDVLSKNKQ BACU011639/1-475 SGGLPFFHWI CQPYFRPGPR EGSKESGGAR SKRALEEEEG STDVLSKNKQ ENSTTRP00000001490/1-475 SGGLPFFHWI CQPYFRPGPR DGSRESGGAP SKRALEEEEG STDILSKNKQ 451 500 ENSBTAP00000056313/1-475 KKKLRNPHKT FDPLLKPKYA KCDQCGNPKG NRCVFNLCRG CCKKRAFKET bmy_02233T0/1-540 KKKLRNPHKT FDPSLKPKYA KCDQCGNPKG NRCVFNLCRG CCKKRAFKET BACU011639/1-475 KKKLRNPHKT FDPSLKPKYA KCDQCGNPKG NRCVFNLCRG CCKKRAFKET ENSTTRP00000001490/1-475 KKKLRNPHKT FDPSLKPKYA KCDQCGNPKG NRCVFNLCRG CCKKRAFKET 501 550 ENSBTAP00000056313/1-475 ADCPGHGLLF KTKLERSLVW KGAQPRLQEP QQAGPGEPGG FPEVVGSALA bmy_02233T0/1-540 ADCPGHGLLF KTKLEKSLAW KGAQPRLQEP QQARPGEPGG FPEVVGSALA BACU011639/1-475 ADCPGHGLLF KTKLEKSLVW KGAQPQLQEP QQARPGEPGG FPEVVGSALA ENSTTRP00000001490/1-475 ADCAGHGLLF KTKLEKSLAW KGAQPRLQEP QQARPGEPGG FPEVMGSALA