KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:22 2014 Check: 00 .. Name: ENSTTRP00000007271/1-524 Len: 526 Check: 8906 Weight: 1.00 Name: ENSP00000217420/1-525 Len: 526 Check: 1442 Weight: 1.00 Name: ENSBTAP00000056328/1-526 Len: 526 Check: 1605 Weight: 1.00 Name: bmy_16211T0/1-394 Len: 526 Check: 4837 Weight: 1.00 Name: BACU015499/1-394 Len: 526 Check: 4837 Weight: 1.00 // 1 50 ENSTTRP00000007271/1-524 MATLLRSKLS NVATSVSNKS QAKVSGMFAR MGFQAATDEE AVGFAHCDDL ENSP00000217420/1-525 MATLLRSKLS NVATSVSNKS QAKMSGMFAR MGFQAATDEE AVGFAHCDDL ENSBTAP00000056328/1-526 MATLLRSKLS NVATSVSNKS QAKVSGMFAR MGFQAATDEE AVGFAHCDDL bmy_16211T0/1-394 ---------- ---------- ---------- ---------- ---------- BACU015499/1-394 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007271/1-524 DFEHRQGLQM DILKTEGEPC GDEGAEPPVE GDIHYQRGGG APLPPSGSDQ ENSP00000217420/1-525 DFEHRQGLQM DILKAEGEPC GDEGAEAPVE GDIHYQRGSG APLPPSGSKD ENSBTAP00000056328/1-526 DFEHRQGLQM DILKSEGEPC GDEGAEPPVE GDIHYQRGGG APLPPSGSKD bmy_16211T0/1-394 ---------- ---------- ---------- ---------- ---------- BACU015499/1-394 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000007271/1-524 --LGAGGEFG GHDKPKITAW EAGWNVTNAI QGMFVLGLPY AILHGGYLGL ENSP00000217420/1-525 Q-VGGGGEFG GHDKPKITAW EAGWNVTNAI QGMFVLGLPY AILHGGYLGL ENSBTAP00000056328/1-526 QSLGAGGEFG GHDKPKITAW EAGWNVTNAI QGMFVLGLPY AILHGGYLGL bmy_16211T0/1-394 ---------- ---------- ---------- --MFVLGLPY AILHGGYLGL BACU015499/1-394 ---------- ---------- ---------- --MFVLGLPY AILHGGYLGL 151 200 ENSTTRP00000007271/1-524 FLIIFAAVVC CYTGKILIAC LYEENEDGEV VRVRDSYVAI ANACCAPRFP ENSP00000217420/1-525 FLIIFAAVVC CYTGKILIAC LYEENEDGEV VRVRDSYVAI ANACCAPRFP ENSBTAP00000056328/1-526 FLIIFAAVVC CYTGKILIAC LYEENEDGEV VRVRDSYVAI ANACCAPRFP bmy_16211T0/1-394 FLIIFAAVVC CYTGKILIAC LYEENEDGEV VRVRDSYVAI ANACCAPRFP BACU015499/1-394 FLIIFAAVVC CYTGKILIAC LYEENEDGEV VRVRDSYVAI ANACCAPRFP 201 250 ENSTTRP00000007271/1-524 TLGGRVVNVA QIIELVMTCI LYVVVSGNLM YNSFPGLPVS QKSWSIIATA ENSP00000217420/1-525 TLGGRVVNVA QIIELVMTCI LYVVVSGNLM YNSFPGLPVS QKSWSIIATA ENSBTAP00000056328/1-526 TLGGRVVNVA QIIELVMTCI LYVVVSGNLM YNSFPGLPVS QKSWSIIATA bmy_16211T0/1-394 TLGGRVVNVA QIIELVMTCI LYVVVSGNLM YNSFPGLPVS QKSWSIIATA BACU015499/1-394 TLGGRVVNVA QIIELVMTCI LYVVVSGNLM YNSFPGLPVS QKSWSIIATA 251 300 ENSTTRP00000007271/1-524 ALLPCAFLKN LKAVSRFSLL CTLAHFVINI LVIAYCLSRA RDWAWEKVKF ENSP00000217420/1-525 VLLPCAFLKN LKAVSKFSLL CTLAHFVINI LVIAYCLSRA RDWAWEKVKF ENSBTAP00000056328/1-526 VLLPCAFLKN LKAVSKFSLL CTLAHFVINI LVIAYCLSRA RDWAWEKVKF bmy_16211T0/1-394 VLLPCAFLKN LKAVSKFSLL CTLAHFVINI LVIAYCLSRA RDWAWEKVKF BACU015499/1-394 VLLPCAFLKN LKAVSKFSLL CTLAHFVINI LVIAYCLSRA RDWAWEKVKF 301 350 ENSTTRP00000007271/1-524 YIDVKKFPIS IGIIVFSYTS QIFLPSLEGN MQQPSEFHCM MNWTHIAACV ENSP00000217420/1-525 YIDVKKFPIS IGIIVFSYTS QIFLPSLEGN MQQPSEFHCM MNWTHIAACV ENSBTAP00000056328/1-526 YIDVKKFPIS IGIIVFSYTS QIFLPSLEGN MQQPSEFHCM MNWTHIAACV bmy_16211T0/1-394 YIDVKKFPIS IGIIVFSYTS QIFLPSLEGN MQQPSEFHCM MNWTHIAACV BACU015499/1-394 YIDVKKFPIS IGIIVFSYTS QIFLPSLEGN MQQPSEFHCM MNWTHIAACV 351 400 ENSTTRP00000007271/1-524 LKGLFALVAY LTWADETKEV ITDNLPGSIR AVVNIFLVAK ALLSYPLPFF ENSP00000217420/1-525 LKGLFALVAY LTWADETKEV ITDNLPGSIR AVVNIFLVAK ALLSYPLPFF ENSBTAP00000056328/1-526 LKGLFALVAY LTWADETKEV ITDNLPGSIR AVVNIFLVAK ALLSYPLPFF bmy_16211T0/1-394 LKGLFALVAY LTWADETKEV ITDNLPGSIR AVVNIFLVAK ALLSYPLPFF BACU015499/1-394 LKGLFALVAY LTWADETKEV ITDNLPGSIR AVVNIFLVAK ALLSYPLPFF 401 450 ENSTTRP00000007271/1-524 AAVEVLEKSL FQEGSRAFFP ACYGGDGRLK SWGLTLRCAL VVFTLLMAIY ENSP00000217420/1-525 AAVEVLEKSL FQEGSRAFFP ACYSGDGRLK SWGLTLRCAL VVFTLLMAIY ENSBTAP00000056328/1-526 AAVEVLEKSL FQEGSRAFFP ACYGGDGRLK SWGLTLRCAL VVFTLLMAIY bmy_16211T0/1-394 AAVEVLEKSL FQEGSRAFFP ACYGGDGRLK SWGLTLRCAL VVFTLLMAIY BACU015499/1-394 AAVEVLEKSL FQEGSRAFFP ACYGGDGRLK SWGLTLRCAL VVFTLLMAIY 451 500 ENSTTRP00000007271/1-524 VPHFALLMGL TGSLTGAGLC FLLPSLFHLR LLWRKLLWHQ VFFDVAIFVI ENSP00000217420/1-525 VPHFALLMGL TGSLTGAGLC FLLPSLFHLR LLWRKLLWHQ VFFDVAIFVI ENSBTAP00000056328/1-526 VPHFALLMGL TGSLTGAGLC FLLPSLFHLR LLWRKLLWHQ VFFDVAIFVI bmy_16211T0/1-394 VPHFALLMGL TGSLTGAGLC FLLPSLFHLR LLWRKLLWHQ VFFDVAIFVI BACU015499/1-394 VPHFALLMGL TGSLTGAGLC FLLPSLFHLR LLWRKLLWHQ VFFDVAIFVI 501 550 ENSTTRP00000007271/1-524 GGICSVSGFV HSLEGLIEAY RTNAED ENSP00000217420/1-525 GGICSVSGFV HSLEGLIEAY RTNAED ENSBTAP00000056328/1-526 GGICSVSGFV HSLEGLIEAY RTNAED bmy_16211T0/1-394 GGICSVSGFV HSLEGLIEAY RTNAED BACU015499/1-394 GGICSVSGFV HSLEGLIEAY RTNAED