KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:23 2014 Check: 00 .. Name: ENSBTAP00000056335/1-528 Len: 602 Check: 8243 Weight: 1.00 Name: BACU010345/1-470 Len: 602 Check: 1627 Weight: 1.00 Name: bmy_08433T0/1-511 Len: 602 Check: 1038 Weight: 1.00 Name: ENSP00000276079/1-471 Len: 602 Check: 3413 Weight: 1.00 Name: ENSTTRP00000009104/1-470 Len: 602 Check: 1671 Weight: 1.00 // 1 50 ENSBTAP00000056335/1-528 RLVSGGRALF SRDGKGRVAS PLLLRSKNGN CGSKIQSPLN KTTLYKLNCI BACU010345/1-470 ---------- ---------- ---------- ---------- ---------- bmy_08433T0/1-511 ---------- ---------- ---------- ---------- ---------- ENSP00000276079/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009104/1-470 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000056335/1-528 DIFSFGTKMQ SNKTFNLEKQ NHTPRKHHQH HH-QQHHQQQ QQQPPPPPMP BACU010345/1-470 --------MQ SNKTFNLEKQ NHTPRKHHQH HH-QQHHQQQ QQQPPPPPIP bmy_08433T0/1-511 --------MQ SNKTFNLEKQ NHTPRKHHQH HH-QQHHQQQ QQQPPPPPIP ENSP00000276079/1-471 --------MQ SNKTFNLEKQ NHTPRKHHQH HHQQQHHQQQ QQQPPPPPIP ENSTTRP00000009104/1-470 --------MQ SNKTFNLEKQ NHTPRKHHQH HH-QQHHQQQ QQQPPPPPIP 101 150 ENSBTAP00000056335/1-528 ANGQQASSQN EGLTIDLKNF RKPGEKTFTQ RSRLFVGNLP PDITEEEMRK BACU010345/1-470 ANGQQASSQN EGLTIDLKNF RKPGEKTFTQ RSRLFVGNLP PDITEEEMRK bmy_08433T0/1-511 ANGQQASSQN EGLTIDLKNF RKPGEKTFTQ RSRLFVGNLP PDITEEEMRK ENSP00000276079/1-471 ANGQQASSQN EGLTIDLKNF RKPGEKTFTQ RSRLFVGNLP PDITEEEMRK ENSTTRP00000009104/1-470 ANGQQASSQN EGLTIDLKNF RKPGEKTFTQ RSRLFVGNLP PDITEEEMRK 151 200 ENSBTAP00000056335/1-528 LFEKYGKAGE VFIHKDKGFG FIRLETRTLA EIAKVELDNM PLRGKQLRVR BACU010345/1-470 LFEKYGKAGE VFIHKDKGFG FIRLETRTLA EIAKVELDNM PLRGKQLRVR bmy_08433T0/1-511 LFEKYGKAGE VFIHKDKGFG FIRLETRTLA EIAKVELDNM PLRGKQLRVR ENSP00000276079/1-471 LFEKYGKAGE VFIHKDKGFG FIRLETRTLA EIAKVELDNM PLRGKQLRVR ENSTTRP00000009104/1-470 LFEKYGKAGE VFIHKDKGFG FIRLETRTLA EIAKVELDNM PLRGKQLRVR 201 250 ENSBTAP00000056335/1-528 FACHSASLTV RNLPQYVSNE LLEEAFSVFG QVERAVVIVD DRGRPSGKGI BACU010345/1-470 FACHSASLTV RNLPQYVSNE LLEEAFSVFG QVERAVVIVD DRGRPSGKGI bmy_08433T0/1-511 FACHSASLTV RNLPQYVSNE LLEEAFSVFG QVERAVVIVD DRGRPSGKGI ENSP00000276079/1-471 FACHSASLTV RNLPQYVSNE LLEEAFSVFG QVERAVVIVD DRGRPSGKGI ENSTTRP00000009104/1-470 FACHSASLTV RNLPQYVSNE LLEEAFSVFG QVERAVVIVD DRGRPSGKGI 251 300 ENSBTAP00000056335/1-528 VEFSGKPAAR KALDRCSEGS FLLTTFPRPV TVEPMDQLDD EEGLPEKLVI BACU010345/1-470 VEFSGKPAAR KALDRCSEGS FLLTTFPRPV TVEPMDQLDD EEGLPEKLVI bmy_08433T0/1-511 VEFSGKPAAR KALDRCSEGS FLLTT----- ---------- ---------- ENSP00000276079/1-471 VEFSGKPAAR KALDRCSEGS FLLTTFPRPV TVEPMDQLDD EEGLPEKLVI ENSTTRP00000009104/1-470 VEFSGKPAAR KALDRCSEGS FLLTTFPRPV TVEPMDQLDD EEGLPEKLVI 301 350 ENSBTAP00000056335/1-528 KNQQFHKERE QPPRFAQPGS FEYEYAMRWK ALIEMEKQQQ DQVDRNIKEA BACU010345/1-470 KNQQFHKERE QPPRFAQPGS FEYEYAMRWK ALIEMEKQQQ DQVDRNIKEA bmy_08433T0/1-511 -------ERE QPPRFAQPGS FEYEYAMRWK ALIEMEKQQQ DQVDRNIKEA ENSP00000276079/1-471 KNQQFHKERE QPPRFAQPGS FEYEYAMRWK ALIEMEKQQQ DQVDRNIKEA ENSTTRP00000009104/1-470 KNQQFHKERE QPPRFAQPGS FEYEYAMRWK ALIEMEKQQQ DQVDRNIKEA 351 400 ENSBTAP00000056335/1-528 REKLEMEMEA ARHEHQVMLM RQ-------- ---------- ---------- BACU010345/1-470 REKLEMEMEA ARHEHQVMLM RQ-------- ---------- ---------- bmy_08433T0/1-511 REKLEMEMEA ARHEHQVMLM RQGEYGPADE LGDVAEDTGF CGEGNNRFDF ENSP00000276079/1-471 REKLEMEMEA ARHEHQVMLM RQ-------- ---------- ---------- ENSTTRP00000009104/1-470 REKLEMEMEA ARHEHQVMLM RQ-------- ---------- ---------- 401 450 ENSBTAP00000056335/1-528 ---------- ---------- ---------- ---------- -----DLMRR BACU010345/1-470 ---------- ---------- ---------- ---------- -----DLMRR bmy_08433T0/1-511 IFGIWIPRMA TWGLNIPFAF WICLYGKLLG LYEEHEEYSQ SVVFIDLMRR ENSP00000276079/1-471 ---------- ---------- ---------- ---------- -----DLMRR ENSTTRP00000009104/1-470 ---------- ---------- ---------- ---------- -----DLMRR 451 500 ENSBTAP00000056335/1-528 QEELRRMEEL HNQEVQKRKQ LELRQEEERR RREEEMRRQQ EEMMRRQQEG BACU010345/1-470 QEELRRMEEL HNQEVQKRKQ LELRQEEERR RREEEMRRQQ EEMMRRQQEG bmy_08433T0/1-511 QEELRRMEEL HNQEVQKRKQ LELRQEEERR RREEEMRRQQ EEMMRRQQEG ENSP00000276079/1-471 QEELRRMEEL HNQEVQKRKQ LELRQEEERR RREEEMRRQQ EEMMRRQQEG ENSTTRP00000009104/1-470 QEELRRMEEL HNQEVQKRKQ LELRQEEERR RREEEMRRQQ EEMMRRQQEG 501 550 ENSBTAP00000056335/1-528 FKGTFPDARE QEIRMGQMAM GGAMGINNRG AMPPAPVPAG TPAPPGPATM BACU010345/1-470 FKGTFPDARE QEIRMGQMAM GGAMGINNRG AMPPAPVPAG PPAPPGPATM bmy_08433T0/1-511 FKGTFPDARE QEIRMGQMAM GGAMGINNRG AMPPAPVPAG TPAPPGPATM ENSP00000276079/1-471 FKGTFPDARE QEIRMGQMAM GGAMGINNRG AMPPAPVPAG TPAPPGPATM ENSTTRP00000009104/1-470 FKGTFPDARE QEIRMGQMAM GGAMGINNRG AMPPAPVPAG TPAPPGPATM 551 600 ENSBTAP00000056335/1-528 MPDGTLGLTP PTTERFGQAA TMEGIGAIGG TPPAFNRAAP GAEFAPNKRR BACU010345/1-470 MPDGTLGLTP PTTERFGQAA TMEGIGAIGG TPPAFNRAAP GAEFAPNKRR bmy_08433T0/1-511 MPDGTLGLTP PTTERFGQAA TMEGIGAIGG TPPAFNRAAP GAEFAPNKRR ENSP00000276079/1-471 MPDGTLGLTP PTTERFGQAA TMEGIGAIGG TPPAFNRAAP GAEFAPNKRR ENSTTRP00000009104/1-470 MPDGTLGLTP PTTERFGQAA TMEGIGAIGG TPPAFNRAAP GAEFAPNKRR 601 650 ENSBTAP00000056335/1-528 RY BACU010345/1-470 RY bmy_08433T0/1-511 RY ENSP00000276079/1-471 RY ENSTTRP00000009104/1-470 RY