KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:28:24 2014 Check: 00 .. Name: bmy_08467T0/1-245 Len: 370 Check: 8820 Weight: 1.00 Name: ENSBTAP00000056350/1-324 Len: 370 Check: 6864 Weight: 1.00 Name: BACU016263/1-302 Len: 370 Check: 4298 Weight: 1.00 Name: ENSTTRP00000015612/1-302 Len: 370 Check: 4567 Weight: 1.00 // 1 50 bmy_08467T0/1-245 ---------- ---------- MLPAGEIGEA LATTCSSANG DQRKNIKEKS ENSBTAP00000056350/1-324 MGSSRRIPAC PPGPWLPSLP SLIPGGSSHG LLSGSDSMKA PCRLLLIVLC BACU016263/1-302 ---------- ---------- ---------- -------MKA PGRLLLVMLC ENSTTRP00000015612/1-302 ---------- ---------- ---------- -------MKA PGRLLLIILC 51 100 bmy_08467T0/1-245 DINIAA--LV XNEPVCEGTD NGDLPSYVVV FIEEEVGSDL KSLKKLDKLI ENSBTAP00000056350/1-324 SVGFSAVYIL LCYWAC---- ---LPFCPAF CLDPHLSIKS RPTVPGP--- BACU016263/1-302 SLGFSAVYIL LCCWAC---- ---LPFCLAS CLDSHLSINP RPTVPGP--- ENSTTRP00000015612/1-302 SLGFSVAYIL LCCWTC---- ---LPFCLAS CLDSHLSINS RPTVRGP--- 101 150 bmy_08467T0/1-245 EQMTESKMQL EEQPLQLD-C KLCAIVSNSG QMVGQKVGNE IDQSSCIWRM ENSBTAP00000056350/1-324 LHFSGYSSVP DGKPLVRELC RSCAVVSSSG QMLGSGLGAE IDSAECVLRM BACU016263/1-302 QHFSGYSSVP DGKPLVREPC RSCAVVSSSG QMLGSGLGAK IDGAECVLRM ENSTTRP00000015612/1-302 QHFSGYSSVP DGKPLVREPC RSCAVVSSSG QMLGSGLGAK IDGAECVLRM 151 200 bmy_08467T0/1-245 NNAPTKGYEE DVGRMTMIRV VSHTSVPLLL KNPDYFFKEA NATIYVIWGP ENSBTAP00000056350/1-324 NQAPTVGFEA DVGQRSTLRV ISHTSVPLLL RNYSHYFQQA RDTLYVVWGQ BACU016263/1-302 NQAPTVGFEA DVGRRSTLRV ISHTSVPLLL RNYSHYFQQA RDTVYVVWGQ ENSTTRP00000015612/1-302 NQAPTVGFEA DVGRRSTLRV ISHTSVPLLL RNYSHYFQQA RDTVYVVWGQ 201 250 bmy_08467T0/1-245 FRNMRKDGNG IVYNMLKKTV DIYPNAQIYV TTEKRMSYCD GVFKKETGKD ENSBTAP00000056350/1-324 GKHMDRALGG RTYRALLQLT RMYPGLQVYT FTERMMAYCD QVFQDETGKN BACU016263/1-302 GRHMDRALGG RTYRVLLQLT RTYPGLQVYT FTERMMAYCD QVFQDETGKN ENSTTRP00000015612/1-302 GRHMDRALGG RTYRMLLQLT RVYPGLQVYT FTERMMAYCD QVFQDETGKN 251 300 bmy_08467T0/1-245 ---------- ---------- ---------- ---------- --SV---YAN ENSBTAP00000056350/1-324 ---------- ---------- ---------- ------REEH HPSVPYHYFE BACU016263/1-302 RRQSGSFLST GWFTMILALE LCEEIVVYGM VSDSYCREES HPSVPYHYFE ENSTTRP00000015612/1-302 RRQSGSFLST GWFTMILALE LCEEIVVYGM VSDSYCREES RPSVPYHYFE 301 350 bmy_08467T0/1-245 RG-FQGC--- ---------- ---------- ----KTSSFV Y--------- ENSBTAP00000056350/1-324 KGRLDECQMY LAHERAPRSA HRFITEKAVF SRWAKKRPIV FAHPSWRTQW BACU016263/1-302 KGRLDECQMY LAHERAPRSA HRFITEKAVF SRWAKKRPIV FAHPSWRTQ- ENSTTRP00000015612/1-302 KGRLDECQMY LAHERAPRSA HRFITEKAVF SRWAKKRPIV FAHPSWRTQ- 351 400 bmy_08467T0/1-245 ---------- ---------- ENSBTAP00000056350/1-324 SHRHSTITRP LLQPHSAKNT BACU016263/1-302 ---------- ---------- ENSTTRP00000015612/1-302 ---------- ----------