KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:28:37 2014 Check: 00 .. Name: bmy_20457T0/1-136 Len: 348 Check: 7628 Weight: 1.00 Name: ENSBTAP00000056497/1-163 Len: 348 Check: 6273 Weight: 1.00 Name: ENSP00000334594/1-340 Len: 348 Check: 4224 Weight: 1.00 Name: BACU013557/1-142 Len: 348 Check: 3026 Weight: 1.00 // 1 50 bmy_20457T0/1-136 -----MKRNP YFI------- --RQLSTAAA SHGGALS--- ---------- ENSBTAP00000056497/1-163 ----DLLVSV FQIV------ --RRY----- ---------- ---------- ENSP00000334594/1-340 MRLLERMRKD WFMVGIVLAI AGAKLEPSIG VNGGPLKPEI TVSYIAVATI BACU013557/1-142 MRLLERMRKE WFMIGIVLAI AGAKLEPSIG VNGGPLMPEI TVSYIAVATI 51 100 bmy_20457T0/1-136 ---------- ---------- ---------- ---FPGE--- ---------V ENSBTAP00000056497/1-163 ---------- ---------- ---------- ---------- ---------I ENSP00000334594/1-340 FFNSGLSLKT EELTSALVHL KLHLFIQIFT LAFFPATIWL FLQLLSITPI BACU013557/1-142 FFNSGLSLNT EELTSALVHI KLHLFIQIFT LAFFPGAIWL FLQLLSITPI 101 150 bmy_20457T0/1-136 DDWDVKPSEG -GPVSPG--- ---------- ---------- ---------- ENSBTAP00000056497/1-163 KDWLERKQPP FGAVSSS--- ---------- ---------- ---------- ENSP00000334594/1-340 NEWLLKGLQT VGCMPPPVSS AVILTKAVGG NEAAAIFNSA FGSFLGIVIT BACU013557/1-142 NEWLLKGLQT VGCMPPP--- ---------- ---------- ---------- 151 200 bmy_20457T0/1-136 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056497/1-163 ---------- ---------- ---------- ---------- ---------- ENSP00000334594/1-340 PLLLLLFLGS SSSVPFTSIF SQLFMTVVVP LIIGQIVRRY IKDWLERKKP BACU013557/1-142 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_20457T0/1-136 --------EK TETVQKSKCV ELRG------ ---------- ---------- ENSBTAP00000056497/1-163 --------VL LMIIYTTFCD TFSNPSIDLD KFSLLLVLFI ICSIQLSFML ENSP00000334594/1-340 PFGAISSSVL LMIIYTTFCD TFSNPNIDLD KFSLVLILFI IFSIQLSFML BACU013557/1-142 --------VS SAVILTKAVG ---------- ---------- ---------- 251 300 bmy_20457T0/1-136 ---------- ---------- --LHSERKME RFGIPMLKIV FAGHEYLSLI ENSBTAP00000056497/1-163 LTFIYSTRNN SGFTPADTVA VMFCSTHKSL TLGIPMLKIV FAGHEYLSLI ENSP00000334594/1-340 LTFIFSTRNN SGFTPADTVA IIFCSTHKSL TLGIPMLKIV FAGHEHLSLI BACU013557/1-142 ---------- ---------- ---------- ---------- --GNEKL--- 301 350 bmy_20457T0/1-136 SVPLLIYHPV QILLGSVLVP TIKSWMVSRQ KHTCKLITNE CETQKRYN ENSBTAP00000056497/1-163 SVPLLIYHPV QILLGSVLVP TIKSWMVSRQ K-GVKLMRPT V------- ENSP00000334594/1-340 SVPLLIYHPA QILLGSVLVP TIKSWMVSRQ K-GVKLTRPT V------- BACU013557/1-142 --------PT RLTMNL---- ---------- ---------- --------