KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:38 2014 Check: 00 .. Name: ENSTTRP00000001972/1-954 Len: 973 Check: 5612 Weight: 1.00 Name: bmy_13869T0/1-904 Len: 973 Check: 1044 Weight: 1.00 Name: BACU009829/1-959 Len: 973 Check: 8844 Weight: 1.00 Name: ENSBTAP00000056506/1-931 Len: 973 Check: 742 Weight: 1.00 Name: ENSP00000360608/1-943 Len: 973 Check: 2555 Weight: 1.00 // 1 50 ENSTTRP00000001972/1-954 MSTMRLLTLA LLFSCSFARA ACDPKIVNIG AVLSTRKHEQ MFREAVNQAN bmy_13869T0/1-904 MSTMRLLTLA LLFSCSFARA ACDPKIVNIG AVLSTRKHEQ MFREAVNQAN BACU009829/1-959 MSTMRLLTLA LLFSCSFARA ACDPKIVNIG AVLSTRKHEQ MFREAVNQAN ENSBTAP00000056506/1-931 MSTMRLLTLA LLFSCSFARA ACDPKIVNIG AVLSTRKHEQ MFREAVNQAN ENSP00000360608/1-943 MSTMRLLTLA LLFSCSVARA ACDPKIVNIG AVLSTRKHEQ MFREAVNQAN 51 100 ENSTTRP00000001972/1-954 KRHGSWKIQL NATSVTHKPN AIQMALSVCE DLISSQVYAI LVSHPPTPND bmy_13869T0/1-904 KRHGSWKIQL NATSVTHKPN AIQMALSVCE DLISSQVYAI LVSHPPTPND BACU009829/1-959 KRHGSWKIQL NATSVTHKPN AIQMALSVCE DLISSQVYAI LVSHPPTPND ENSBTAP00000056506/1-931 KRHGSWKIQL NATSVTHKPN AIQMALSVCE DLISSQVYAI LVSHPPTPND ENSP00000360608/1-943 KRHGSWKIQL NATSVTHKPN AIQMALSVCE DLISSQVYAI LVSHPPTPND 101 150 ENSTTRP00000001972/1-954 HFTPTPVSYT AGFYRIPVLG LTTRMSIYSD KXXXXXXXXX XXXXXXXXXX bmy_13869T0/1-904 HFTPTPVSYT AGFYRIPVLG LTTRMSIYSD KSIHLSFLRT VPPYSHQSSV BACU009829/1-959 HFTPTPVSYT AGFYRIPVLG LTTRMSIYSD KSIHLSFLRT VPPYSHQSSV ENSBTAP00000056506/1-931 HFTPTPVSYT AGFYRIPVLG LTTRMSIYSD KSIHLSFLRT VPPYSHQSSV ENSP00000360608/1-943 HFTPTPVSYT AGFYRIPVLG LTTRMSIYSD KSIHLSFLRT VPPYSHQSSV 151 200 ENSTTRP00000001972/1-954 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX SKKRNYENLD bmy_13869T0/1-904 WFEMMRVYSW NHIILLVSDD HEGRAAQKRL ETLLEERES- ---------- BACU009829/1-959 WFEMMRVYSW NHIVLLVSDD HEGRAAQKRL ETLLEERESK SKKRNYENLD ENSBTAP00000056506/1-931 WFEMMRVYSW NHVILLVSDD HEGRAAQKRL ETLLEERESK SKKRNYESLD ENSP00000360608/1-943 WFEMMRVYSW NHIILLVSDD HEGRAAQKRL ETLLEERESK SKKRNYENLD 201 250 ENSTTRP00000001972/1-954 QLSYDNKRGP KAEKVLQFDP GTKNVTALLM EARELEARVI VLSASEDDAA bmy_13869T0/1-904 ---------- KAEKVLQFDP GTKNVTALLM EARELEARVI VLSASEDDAA BACU009829/1-959 QLSYDNKRGP KAEKVLQFDP GTKNVTALLM EARELEARVI VLSASEDDAA ENSBTAP00000056506/1-931 QLSYDHKRGP KAEKVLQFDP GTKNVTALLL EARELEARVI ILSASEDDAA ENSP00000360608/1-943 QLSYDNKRGP KAEKVLQFDP GTKNVTALLM EAKELEARVI ILSASEDDAA 251 300 ENSTTRP00000001972/1-954 TVYRAAAMLN MTGSGYVWLV GEREISGNAL RYAPDGIIGL QLINGKNESA bmy_13869T0/1-904 TVYRAAAMLN MTGSGYVWLV GEREISGNAL RYAPDGIIGL QLINGKNESA BACU009829/1-959 TVYRAAAMLN MTGSGYVWLV GEREISGNAL RYAPDGIIGL QLINGKNESA ENSBTAP00000056506/1-931 TVYRAAAMLN MTGSGYVWLV GEREISGNAL RYAPDGIIGL QLINGKNESA ENSP00000360608/1-943 TVYRAAAMLN MTGSGYVWLV GEREISGNAL RYAPDGILGL QLINGKNESA 301 350 ENSTTRP00000001972/1-954 HISDAVGVVA QAVHELLEKE NITDPPRGCV GNTNIWKTGP LFKRVLMSSK bmy_13869T0/1-904 HISDAVGVVA QAVHELLEKE NITDPPRGCV GNTNIWKTGP LFKRVLMSSK BACU009829/1-959 HISDAVGVVA QAVHELLEKE NITDPPRGCV GNTNIWKTGP LFKRVLMSSK ENSBTAP00000056506/1-931 HISDAVGVVA QAVHELLEKE NITDPPRGCV GNTNIWKTGP LFKRVLMSSK ENSP00000360608/1-943 HISDAVGVVA QAVHELLEKE NITDPPRGCV GNTNIWKTGP LFKRVLMSSK 351 400 ENSTTRP00000001972/1-954 YADGVTGRVE FNEDGDRKFA NYSIMNLQNR KLVQVGIYNG THVIPNDRKI bmy_13869T0/1-904 YADGVTGRVE FNEDGDRKFA NYSIMNLQNR KLVQVGIYNG THVIPNDRKI BACU009829/1-959 YADGVTGRVE FNEDGDRKFA NYSIMNLQNR KLVQVGIYNG THVIPNDRKI ENSBTAP00000056506/1-931 YADGVTGRVE FNEDGDRKFA NYSIMNLQNR KLVQVGIYNG THVIPNDRKI ENSP00000360608/1-943 YADGVTGRVE FNEDGDRKFA NYSIMNLQNR KLVQVGIYNG THVIPNDRKI 401 450 ENSTTRP00000001972/1-954 IWPGGETEKP RGYQMSTRMK IVTIHQEPFV YVKPTLSDGT CKEEFTVNGD bmy_13869T0/1-904 IWPGGETEKP RGYQMSTRLK IVTIHQEPFV YVKPTLSDGT CKEEFTVNGD BACU009829/1-959 IWPGGETEKP RGYQMSTRLK IVTIHQEPFV YVKPTLSDGT CKEEFTVNGD ENSBTAP00000056506/1-931 IWPGGETEKP RGYQMSTRLK IVTIHQEPFV YVKPTLSDGT CKEEFTVNGD ENSP00000360608/1-943 IWPGGETEKP RGYQMSTRLK IVTIHQEPFV YVKPTLSDGT CKEEFTVNGD 451 500 ENSTTRP00000001972/1-954 PVKKVICTGP NDTSPGSPRH TVPQCCYGFC IDLLIKLART MNFPYEVHLV bmy_13869T0/1-904 PVKKVICTGP NDTSPGSPRH TVPQCCYGFC IDLLIKLART MNFTYEVHLV BACU009829/1-959 PVKKVICTGP NDTSPGSPRH TVPQCCYGFC IDLLIKLART MNFTYEVHLV ENSBTAP00000056506/1-931 PVKKVICTGP NDTSPGSPRH TVPQCCYGFC VDLLIKLART MNFTYEVHLV ENSP00000360608/1-943 PVKKVICTGP NDTSPGSPRH TVPQCCYGFC IDLLIKLART MNFTYEVHLV 501 550 ENSTTRP00000001972/1-954 ADGKFGTQER VNNSSKSG-N VMMGELLPGL ADMIVVPLTF YNERAQYIEF bmy_13869T0/1-904 ADGKFGTQER VNNSNKKEWN GMMGELLSGQ ADMIVAPLTI NNERAQYIEF BACU009829/1-959 ADGKFGTQER VNNSNKKEWN GMMGELLSGQ ADMIVAPLTI NNERAQYIEF ENSBTAP00000056506/1-931 ADGKFGTQER VNNSNKKEWN GMMGELLSGQ ADMIVAPLTI NNERAQYIEF ENSP00000360608/1-943 ADGKFGTQER VNNSNKKEWN GMMGELLSGQ ADMIVAPLTI NNERAQYIEF 551 600 ENSTTRP00000001972/1-954 SKPFNYHELD FLVINXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_13869T0/1-904 SKPFKYQGLT ILVKKEIPRS TLDSFMQPFQ STLWLLVGLS VHVVAVMLYL BACU009829/1-959 SKPFKYQGLT ILVKKEIPRS TLDSFMQPFQ STLWLLVGLS VHVVAVMLYL ENSBTAP00000056506/1-931 SKPFKYQGLT ILVKKEIPRS TLDSFMQPFQ STLWLLRPLR PR-------- ENSP00000360608/1-943 SKPFKYQGLT ILVKKEIPRS TLDSFMQPFQ STLWLLVGLS VHVVAVMLYL 601 650 ENSTTRP00000001972/1-954 XXXXXPFGRF KVNSEEEEED ALTLSSAMWF SWGVLLNSGI GEGAPRSFSA bmy_13869T0/1-904 LDRF------ ---------- ---------- ---------- -----RSFSA BACU009829/1-959 LDRFSPFGRF KVNSEEEEED ALTLSSAMWF SWGVLLNSGI GEGAPRSFSA ENSBTAP00000056506/1-931 ----SPFGRF KVNSEEEEED ALTLSSAMWF SWGVLLNSGI GEGAPRSFSA ENSP00000360608/1-943 LDRFSPFGRF KVNSEEEEED ALTLSSAMWF SWGVLLNSGI GEGAPRSFSA 651 700 ENSTTRP00000001972/1-954 RILGMVWAGF AMIIVASYTA NLAAFLVLDR PEERITGIND PRLRNPSDKF bmy_13869T0/1-904 RILGMVWAGF AMIIVASYTA NLAAFLVLDR PEERITGIND PRLRNPSDKF BACU009829/1-959 RILGMVWAGF AMIIVASYTA NLAAFLVLDR PEERITGIND PRLRNPSDKF ENSBTAP00000056506/1-931 RILGMVWAGF AMIIVASYTA NLAAFLVLDR PEERITGIND PRLRNPSDKF ENSP00000360608/1-943 RILGMVWAGF AMIIVASYTA NLAAFLVLDR PEERITGIND PRLRNPSDKF 701 750 ENSTTRP00000001972/1-954 IYATVKQSSV DIYFRRQVEL STMYRHMEKH NYESAAEAIQ AVRDNKLHAF bmy_13869T0/1-904 IYATVKQSSV DIYFRRQVEL STMYRHMEKH NYESAAEAIQ AVRDNKLHAF BACU009829/1-959 IYATVKQSSV DIYFRRQVEL STMYRHMEKH NYESAAEAIQ AVRDNKLHAF ENSBTAP00000056506/1-931 IYATVKQSSV DIYFRRQVEL STMYRHMEKH NYESAAEAIQ AVRDNKLHAF ENSP00000360608/1-943 IYATVKQSSV DIYFRRQVEL STMYRHMEKH NYESAAEAIQ AVRDNKLHAF 751 800 ENSTTRP00000001972/1-954 IWDSAVLEFE ASQKCDLVTT GELFFRSGFG IGMRKDSPWK QNVSLSILKS bmy_13869T0/1-904 IWDSAVLEFE ASQKCDLVTT GELFFRSGFG IGMRKDSPWK QNVSLSILKS BACU009829/1-959 IWDSAVLEFE ASQKCDLVTT GELFFRSGFG IGMRKDSPWK QNVSLSILKS ENSBTAP00000056506/1-931 IWDSAVLEFE ASQKCDLVTT GELFFRSGFG IGMRKDSPWK QNVSLSILKS ENSP00000360608/1-943 IWDSAVLEFE ASQKCDLVTT GELFFRSGFG IGMRKDSPWK QNVSLSILKS 801 850 ENSTTRP00000001972/1-954 HENGFMEDLD KTWVRYQECD SRSNAPATLT FENMAGVFML VAGGIVAGIF bmy_13869T0/1-904 HENGFMEDLD KTWVRYQECD SRSNAPATLT FENMAGVFML VAGGIVAGIF BACU009829/1-959 HENGFMEDLD KTWVRYQECD SRSNAPATLT FENMAGVFML VAGGIVAGIF ENSBTAP00000056506/1-931 HENGFMEDLD KTWVRYQECD SRSNAPATLT FENMAGVFML VAGGIVAGIF ENSP00000360608/1-943 HENGFMEDLD KTWVRYQECD SRSNAPATLT FENMAGVFML VAGGIVAGIF 851 900 ENSTTRP00000001972/1-954 LIFIEIAYKR HKDARRKQMQ LAFAAVNVWR KNLQ------ ------DKKK bmy_13869T0/1-904 LIFIEIAYKR HKDARRKQMQ LAFAAVNVWR KNLQVGQATL RGLVPTARPG BACU009829/1-959 LIFIEIAYKR HKDARRKQMQ LAFAAVNVWR KNLQ------ ------DRKS ENSBTAP00000056506/1-931 LIFIEIAYKR HKDARRKQMQ LAFAAVNVWR KNLQ------ ------DRKS ENSP00000360608/1-943 LIFIEIAYKR HKDARRKQMQ LAFAAVNVWR KNLQ------ ------DRKS 901 950 ENSTTRP00000001972/1-954 DKEE---HKK KDTRGIASKL GSKLKKRR-S KDTSTGGGRG ALQNQKDTVL bmy_13869T0/1-904 PGPPPSPQAE ALALAPRSPR GKDWSWEPQP RPRCWGP--- ----PAGGRL BACU009829/1-959 GRAEPDPKKK ATFRAITSTL ASSFKRRRSS KDTSTGGGRG ALQNQKDTVL ENSBTAP00000056506/1-931 GRAEPDPKKK ATFRAITSTL ASSFKRRRSS KDTQYHP--- ---------- ENSP00000360608/1-943 GRAEPDPKKK ATFRAITSTL ASSFKRRRSS KDTQYHP--- ---------- 951 1000 ENSTTRP00000001972/1-954 PRRAIEREEG QLQMCARHRE S-- bmy_13869T0/1-904 CKAGLQASAW PLCLQSRPPA PIP BACU009829/1-959 PRRAIEREEG QLQMCARHRE S-- ENSBTAP00000056506/1-931 -----TDITG PLNLSDPSVS TVV ENSP00000360608/1-943 -----TDITG PLNLSDPSVS TVV