KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:40 2014 Check: 00 .. Name: ENSTTRP00000003310/1-260 Len: 285 Check: 7616 Weight: 1.00 Name: bmy_18860T0/1-278 Len: 285 Check: 1345 Weight: 1.00 Name: ENSP00000339681/1-261 Len: 285 Check: 2351 Weight: 1.00 Name: BACU004233/1-261 Len: 285 Check: 2351 Weight: 1.00 Name: ENSBTAP00000056525/1-177 Len: 285 Check: 8957 Weight: 1.00 // 1 50 ENSTTRP00000003310/1-260 ---------- MGCIQSITCK ARIRRENIVV YDVCATIDQC PTRIEETSPI bmy_18860T0/1-278 MLLLAPHPLD DHRALARAKQ GSFREVALAL MDTGRTGWKI WDQTKFCDFP ENSP00000339681/1-261 ---------- MGCIQSITCK ARIRRENIVV YDVCATIDQC PTRIEETSPI BACU004233/1-261 ---------- MGCIQSITCK ARIRRENIVV YDVCATIDQC PTRIEETSPI ENSBTAP00000056525/1-177 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003310/1-260 VLRYKTPYFK ASARVVM--- --------PP IPRHETWVVG WIQACNQMEF bmy_18860T0/1-278 TKLTSRPWAR VIAHITLDRK MEKNHECKDS IDKEISITFN LTSLCPPFHL ENSP00000339681/1-261 VLRYKTPYFK ASARVVM--- --------PP IPRHETWVVG WIQACNQMEF BACU004233/1-261 VLRYKTPYFK ASARVVM--- --------PP IPRHETWVVG WIQACNQMEF ENSBTAP00000056525/1-177 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000003310/1-260 FNTYSDLGXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18860T0/1-278 ILPS----KS SWELPDLREG RVKAISDSDG VSYPWYGNTT ETVTLVGPTN ENSP00000339681/1-261 FNTYSDLGMS SWELPDLREG RVKAISDSDG VSYPWYGNTT ETVTLVGPTN BACU004233/1-261 FNTYSDLGMS SWELPDLREG RVKAISDSDG VSYPWYGNTT ETVTLVGPTN ENSBTAP00000056525/1-177 --------RS SWELPDLREG RVKAISDSDG VSYPWYGNTT ETVTLVGPTN 151 200 ENSTTRP00000003310/1-260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXLV-MNTT bmy_18860T0/1-278 KISRFSVSMN DNFYPSVTWA VPVSDSNVPL LTRIKRDQSF TTWLVAMNTT ENSP00000339681/1-261 KISRFSVSMN DNFYPSVTWA VPVSDSNVPL LTRIKRDQSF TTWLVAMNTT BACU004233/1-261 KISRFSVSMN DNFYPSVTWA VPVSDSNVPL LTRIKRDQSF TTWLVAMNTT ENSBTAP00000056525/1-177 KISRFSVSMN DNFYPSVTWA VPVSDSNVPL LTRIKRDQSF TTWLVAMNTT 201 250 ENSTTRP00000003310/1-260 TKEKIILQTI KWRMRVDIEV DPLQLLEQRA RLVSRTQQEQ PRIVSRMEPI bmy_18860T0/1-278 TKEKIILQTI KWRMRVDIEV DPLQLLGQRA RLVGRTQQEQ PRILSRMEPI ENSP00000339681/1-261 TKEKIILQTI KWRMRVDIEV DPLQLLGQRA RLVGRTQQEQ PRILSRMEPI BACU004233/1-261 TKEKIILQTI KWRMRVDIEV DPLQLLGQRA RLVGRTQQEQ PRILSRMEPI ENSBTAP00000056525/1-177 TKEKIILQTI KWRMRVDIEV DPLQLLGQRA RLVGRTQQEQ PRILSRMEPI 251 300 ENSTTRP00000003310/1-260 PPNALVKPNA NDAQVLMWRP KRGPPLVVIP PK--- bmy_18860T0/1-278 PPNALVKPNA NDAQVLMWRP KRGPPLVVIP PK--- ENSP00000339681/1-261 PPNALVKPNA NDAQVLMWRP KRGPPLVVIP PK--- BACU004233/1-261 PPNALVKPNA NDAQVLMWRP KRGPPLVVIP PK--- ENSBTAP00000056525/1-177 PPNALVKPNA NDAQVLMWRP KRGGKSLPFR NKENR