KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:41 2014 Check: 00 .. Name: ENSP00000405708/1-941 Len: 1005 Check: 7119 Weight: 1.00 Name: ENSBTAP00000056529/1-943 Len: 1005 Check: 3120 Weight: 1.00 Name: ENSTTRP00000013933/1-732 Len: 1005 Check: 1777 Weight: 1.00 Name: bmy_16091T0/1-544 Len: 1005 Check: 4911 Weight: 1.00 Name: BACU016600/1-888 Len: 1005 Check: 7309 Weight: 1.00 // 1 50 ENSP00000405708/1-941 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056529/1-943 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013933/1-732 DRARNAGPVP CGPLECRRHR FYASREEGAN RSRTLKDCYA GTWQSQGTSG bmy_16091T0/1-544 ---------- ---------- ---------- ---------- ---------- BACU016600/1-888 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000405708/1-941 ---------- -MSSEFLAEL HWEDGFAIPV ANEENKLLED QLSKLKDERA ENSBTAP00000056529/1-943 ---------- -MSSEFLAEL RWEDGFAIPV ANEENKTLEE QLSKLQDERS ENSTTRP00000013933/1-732 GVSFASLGAQ VMSSEFLAEL NWEEGFAIPV ANEENKILED LLSKLRNERS bmy_16091T0/1-544 ---------- -MSSEFLAEL NWEEGFAIPV ANEENKILED LLSKLRDERS BACU016600/1-888 ---------- -MSSEFLAEL NWEEGFAIPV ANEENKILED LLSKLRDERS 101 150 ENSP00000405708/1-941 SLQDELREYE ERINSMTSHF KNVKQELSIT QSLCKARERE TESEEHFKAI ENSBTAP00000056529/1-943 SMQDQLRDYE DRINAMTSHF KNVKQEFLFT QSLCKARDHE IESEEHFKMI ENSTTRP00000013933/1-732 SFQDQLRDYE DRINAMTSHF KNVKQEFLFT QSLCKAREHE IESEEHFKMI bmy_16091T0/1-544 SFQDQLRDYE DRINAMTSHF KNVKQEFLFT QSLCKAREHE IESEEHFKMI BACU016600/1-888 SFQDQLRDYE DRINAMTSHF KNVKQEFLFT QSLCKAREHE IESEKHFKMI 151 200 ENSP00000405708/1-941 AQRELGRVKD EIQRLENEMA SILEKKSDKE NGIFKATQKL DGLKCQMNWD ENSBTAP00000056529/1-943 AERELGRVKD EIQRLENEIT SIREKKNDKE NSIFKTTQKL DGLKCQMNWD ENSTTRP00000013933/1-732 AERELGRVKE EMQRLENEIT SIREKKSDKE XXXXXXXXXX XXXXXXXXXX bmy_16091T0/1-544 AERELGRVKD EMQRLENEIT SIREKKSDKE NYIFKTTQKL DGLKCQMNWD BACU016600/1-888 AERELGRVKD EMQRLESEIT SIREKKSDKE ---------- ---------- 201 250 ENSP00000405708/1-941 QQALEAWLEE SAHKDSDALT LQKYAQQDDN KIRALTLQLE RLTLECNQKR ENSBTAP00000056529/1-943 QQALEAWLEE SAHKDSDALT LQKYAQQDDN KIRALTLQLE RLTVECNQRR ENSTTRP00000013933/1-732 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXALTLQLE RLTVECNQRR bmy_16091T0/1-544 QQALEAWLEE SAHKDSDALT LQKYARQDDN KIRALTLQLE RLTVECNQRR BACU016600/1-888 ---------- ---------- ---------- ---ALTLQLE RLTVECNQRR 251 300 ENSP00000405708/1-941 KILDNELTET ISAQLELDKA AQDFRKIHNE RQELIKQWEN TIEQMQKRDG ENSBTAP00000056529/1-943 KVLDNEFAET LSVQLELDKA AQDFRKIHNE RQKLILQWES TIEQMQKRDK ENSTTRP00000013933/1-732 KVLDNELTET LSAQLELDKA AQDFRNIHNE RQELIQQWEN TIEQMQKRDR bmy_16091T0/1-544 KVLDNELAET LSAQLELDKA AQDFRKIHNE RQELIQQWEN TIEQMQKRDR BACU016600/1-888 KVLDNELAET LSAQLELDKA AQDFRKIHNE RQELIQQWEN TIEQMQKRDR 301 350 ENSP00000405708/1-941 DIDNCALELA RIKQETREKE NLVKEKIKFL ESEIGNNTEF EKRISVADRK ENSBTAP00000056529/1-943 DIDNCAVALA RIKQEIREKE NLVKEKIKFL ENEIGNNTEY EKKISVADRK ENSTTRP00000013933/1-732 DIDNCALALA KIKQEIREKE NLVKEKIKFL ESEIGNNTEY EKKISVADRE bmy_16091T0/1-544 DIDNCALALA KIKQEIREKE NLVKEKIKFL ESEIGNNTEY EKKISVADRK BACU016600/1-888 DIDNCALALA KIKQEIREKE NLVKEKIKFL ESEIGNNTEY EKKISVADRK 351 400 ENSP00000405708/1-941 LLKCRTAYQD HETSRIQLKG ELDSLKATVN RTSSDLEALR KNISKIKKDI ENSBTAP00000056529/1-943 VLKCRTEYQR HEANRIQLKD ELDSLKATVN RSSSDLEALR KNISKVKMDI ENSTTRP00000013933/1-732 VLKCRTEYQC HETKRIQLKD ELDTLKATVN RSSSDLEALR KNISKIKKDI bmy_16091T0/1-544 VLKCRTEYQC HETNRIQLKD ELDSLKATVN RSSSDLEALR KNISRIKKDI BACU016600/1-888 VLKCRTEYQC HETNRIQLKD ELDSLKATVN RSSSDLEALR KNISKIKKDI 401 450 ENSP00000405708/1-941 HEETARLQKT KNHNEIIQTK LKEITEKTMS VEEKATNLED MLKEEEKDVK ENSBTAP00000056529/1-943 NEETARLGKI KNHNQIVRKK LKEITEKTMS VEEKATNLED MLREEERGVK ENSTTRP00000013933/1-732 NEETTRLHKI KNHNQIVRKK LKQITEKTTS VEEKATNLED MLKEEERGVK bmy_16091T0/1-544 NEETTRLHKI KNHNQI---- ---------- ---------- ---------- BACU016600/1-888 NEETTRLHKI KNHNQIVRKK LKQITEKTTS VEEKATNLED MLREEERGAK 451 500 ENSP00000405708/1-941 EVDVQLNLIK GVLFKKAQEL QTETMKEKAV LSEIEGTRSS LKHLNHQLQK ENSBTAP00000056529/1-943 EVEVQLNIVK DVLFKKVQEL QTETMKEKAL VSEIEGTRSS LKHLNHQLHK ENSTTRP00000013933/1-732 ELEVQLNIVK DVLFKKVQVL QTETMKEKAV VSEIEGTRSS LKHLNHQLHK bmy_16091T0/1-544 EVEVQLNIVK DVLFKKVQEL QTETMKEKAV VSEIEGTRSS LKHLNHQLHK BACU016600/1-888 EVEVQLNIVK DVLFKKVQEL QTETMKEKAV VSEIEGTRSS LKHLNHQLHK 501 550 ENSP00000405708/1-941 LDFETLKQQE IMYSQDFHIQ QVERRMSRLK GEINSEEKQA LEAKIVELRK ENSBTAP00000056529/1-943 LDFETLQQQE IMYAQDFYIQ QVERRMSRLK GDINSEEKQA LEAKTVELQK ENSTTRP00000013933/1-732 LDFETLQQQE IMYNQDFYIQ QVERRMSRLK GDINSEEKQA LEAKTVELQK bmy_16091T0/1-544 LDFEXLQQQE IMYSQDFYIQ QVERRMSRLK GEINSEEKQA LEAKTVELQK BACU016600/1-888 LDFETLQQQE IMYSQDFYIQ QVERRMSRLK GEINSEEKQT LEAKTVELQK 551 600 ENSP00000405708/1-941 SLEEKKSTCG LLETQIKKLH NDLYFIKKAH SKNSDEKQSL MTKINELNLF ENSBTAP00000056529/1-943 TLEEKKSALC LLETQIKKLH NDLYFTKKSN SKYRDEKQSL MTKINELTLF ENSTTRP00000013933/1-732 TLEEKKSTFN LLETQIKKLH NDLYFIKKSN SKNRDEKQSL MTKINELNLF bmy_16091T0/1-544 TLEEKKSTFN LLETQIKKLH ---------- ---------- ---------- BACU016600/1-888 TLEEKKSTFN LLETQIKKLH NDLYFIKKSN SKNRDEKQSL MTKINELNLF 601 650 ENSP00000405708/1-941 IDRSEKELDK AKGFKQDLMI EDNLLKLEVK RTREMLHSKA EEVLSLEKRK ENSBTAP00000056529/1-943 NDRSEKELTK AKALKQDLMI EDNLLKLEVK RTRELLHSKA EEVLSLEKRK ENSTTRP00000013933/1-732 NDRSEKELNK AKALKQDLMI EDNLLKLEVK RIRDMLHSKA EEVLSLEERK bmy_16091T0/1-544 ---------- ------DLMI EDNLLKLEVK RIREMLHSKA KEVLSLEERK BACU016600/1-888 NDRSEKELNK AKALKQDLMI EDNLLKLEVK RIREMLHSKA KEVLSLEERK 651 700 ENSP00000405708/1-941 QQLYTAMEER TEEIKVHKTM LASQIRYVDQ ERENISTEFR ERLSKIEKLK ENSBTAP00000056529/1-943 QQLHTAMEER TEEIKVHKTM LASQIRYVDQ ERQNVSAEFH ERLSKIDKLK ENSTTRP00000013933/1-732 QQLHTAMEER NEEIKVHKKM LASQIRCVDQ ERQNISAEFH ERLSKIDKLK bmy_16091T0/1-544 QQLHTAMEER TEEIKVHKKM LASQIRCVDQ ERQNI----- ---------- BACU016600/1-888 QQLHTAMEER TEEIKVHKKM LASQIRCVDQ ERQNISAEFH ERLSKIDKLK 701 750 ENSP00000405708/1-941 NRYEILTVVM LPPEGEEEKT QAYYVIKAAQ EKEELQREGD CLDAKIN--K ENSBTAP00000056529/1-943 NRYEILTVVM LPPEGEEEKT QAYYVIKQAL VNNQMEKTGR CIKLKLSLIT ENSTTRP00000013933/1-732 NRYEILTVVM LPPEGEEEKT QAYYVIKVLS MR-------- ---------- bmy_16091T0/1-544 ---------- ---------- ---------- ---------- ---------- BACU016600/1-888 NRYEILTVVM LPPEGEEEKT QAYYVIKAAQ EKEELQREGD SLDAKIN--K 751 800 ENSP00000405708/1-941 AEKEIYALEN TLQVLNSCNN NYKQSFKKVT PSSDEYELKI QLEEQKRAVD ENSBTAP00000056529/1-943 KSKPLFYFLH TLSVLKYDNT YMKQSFQKVT PSSAEYEVKI QLEEQKRAVD ENSTTRP00000013933/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16091T0/1-544 ---------- ---------- ---------- ---------- ---------- BACU016600/1-888 AEKEIYALGN TLQVLNSCNN NYKQSFKKVT PSSAEYEVKI QLEEQKRAVD 801 850 ENSP00000405708/1-941 EKYRYKQRQI RELQEDIQSM ENTLDVIEHL ANNVKEKLSE KQAYSFQLSK ENSBTAP00000056529/1-943 EKYRYKQRQI RELQEDIQSM ENTLTVIEHL TNNVKEKVTE KQAYVLQLNR ENSTTRP00000013933/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16091T0/1-544 ---------- ---------- ---------- ---------- ---------- BACU016600/1-888 EKHRYKQRQI RELQEDIQSM ENTLAVIEHL TNNVKEKISE KQAYALQLRR 851 900 ENSP00000405708/1-941 ETEEQKPKLE RVTKQCAKLT KEIRLLKDTK DETMEEQDIK LREMKQFHKV ENSBTAP00000056529/1-943 ETEEQKPKLE RVTKQCAKLT KEVRLLKDTK DETLEEQDIK LREVKQLHKI ENSTTRP00000013933/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16091T0/1-544 ---------- ---------- ---------- ---------- ---------- BACU016600/1-888 ETEEQKPKLE RVTKQCAKLI KEIRLLKDTK DETLEEQDIK LREVKQLHKI 901 950 ENSP00000405708/1-941 IDEMLVDIIE ENTEIRIILQ TYFQQSGLEL PTASTKGSRQ SSRSPSHTSL ENSBTAP00000056529/1-943 IDEMIVDITQ ENAEIGVILQ TYFQQSGLEL PTTSTKGSRH SSRSPSQTSL ENSTTRP00000013933/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16091T0/1-544 ---------- ---------- ---------- ---------- ---------- BACU016600/1-888 IDEMLVDITE ENAEIGIILQ TYFQQSGLAL PTASTKGSRH SSRSPSQTSL 951 1000 ENSP00000405708/1-941 -SARSSRSTS TSTSQSSIKV LELKFPASSS LVGSPSRPSS ASSSSSNVKS ENSBTAP00000056529/1-943 LSARSSKSTS TSASQTSIKV LELNFPA-SP LTGSTSRPTS ASSASSTGKS ENSTTRP00000013933/1-732 ---------- ---------- ---------- ---------- ---------- bmy_16091T0/1-544 ---------- ---------- ---------- ---------- ---------- BACU016600/1-888 VSARSSKSTS TSASQTSIKV LELNFPA-SS QTGSTSRPTS ASSGSSNGKS 1001 1050 ENSP00000405708/1-941 KKSSK ENSBTAP00000056529/1-943 RKTNK ENSTTRP00000013933/1-732 ----- bmy_16091T0/1-544 ----- BACU016600/1-888 KKSSK