KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:28:45 2014 Check: 00 .. Name: ENSBTAP00000056571/1-537 Len: 607 Check: 7255 Weight: 1.00 Name: ENSP00000416673/1-543 Len: 607 Check: 7139 Weight: 1.00 Name: bmy_12687T0/1-596 Len: 607 Check: 428 Weight: 1.00 Name: BACU002844/1-347 Len: 607 Check: 5091 Weight: 1.00 // 1 50 ENSBTAP00000056571/1-537 ---------- ---------- ---------- ---------- ---------- ENSP00000416673/1-543 ---------- ---------- ---------- ---------- ---------- bmy_12687T0/1-596 MAKLSRTDSH SPGVGVATHA AVYLPEADSA LSPEETAMEQ VCQPEEMKRL BACU002844/1-347 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000056571/1-537 --SCLDQGSG KSHVPLALEE ELVSASQLEE EE-------- -------LDP ENSP00000416673/1-543 -MNCLE-GPG KTCGPLASEE ELVSACQLEK EEENEGEEEE EEEDEEDLDP bmy_12687T0/1-596 QGTHLNQSPG KSYDPLALKE VLVCASQLEE EEQN------ EEEREKEVDP BACU002844/1-347 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000056571/1-537 DLAPDMEEEE --AEEEEEND LGDPAVQSAV HNSQKGLLSS PGITAPGVPG ENSP00000416673/1-543 DLDPDLEEEE --------ND LGDPAVLGAV HNTQRALLSS PGVKAPGMLG bmy_12687T0/1-596 DLAPDLEEEE EQEEEEEEND LGDPAVLSAV RNIQKGLLSS PGIKAPGVLG BACU002844/1-347 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000056571/1-537 MPPASLHFPW QTLDHLAPLP FRPSLPSAGS AARHFGPQLP APDPSLLCSP ENSP00000416673/1-543 MSLASLHFLW QTLDYLSPIP FWPTFPSTSS PAQHFGPRLP SPDPTLFCSL bmy_12687T0/1-596 MSPASLHFLW QTLDYLAPLP FRPAFPSTST AAPHFGPRLP SPDPSVLCSP BACU002844/1-347 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000056571/1-537 PTSWPLRLSH LTQLHPQHQR ILKQQQQQGR PRSPPAKK-W PQQPDSYANL ENSP00000416673/1-543 LTSWPPRFSH LTQLHPRHQR IL-QQQQHSQ TPSPPAKKPW SQQPDPYANL bmy_12687T0/1-596 STSWPLRLSH LTQLHPQHQR ILKQQQQHGR PPSPPAKKPW SQQPDPYANL BACU002844/1-347 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000056571/1-537 MTQKEKDWVV RVQMVQLQSE NPRLDDYYYQ EYYQKLEKKQ ADEELLGQRS ENSP00000416673/1-543 MTRKEKDWVI KVQMVQLQSA KPRLDDYYYQ EYYQKLEKKQ ADEELLGRRN bmy_12687T0/1-596 MTRKEKDWVV KVQMVQLQSE NPRLDDYYYQ EYYQKLEKKQ ADEELLGRRS BACU002844/1-347 MTRKEKDWVV KVQMVQLQSE NPRLDDYYYQ EYYQKLEKKQ ADEELLGRRS 301 350 ENSBTAP00000056571/1-537 RFESLKLVTP YIQKAEAYES VVRIEGSLGQ VAVSTCFTPR RAIDAVPHGT ENSP00000416673/1-543 RVESLKLVTP YIPKAEAYES VVRIEGSLGQ VAVSTCFSPR RAIDAVPHGT bmy_12687T0/1-596 RFESFKLVTP YIQKAEAYES VVRIEGSLGQ VAVSTCFSPR RAIDAVPHGT BACU002844/1-347 RFESFKLVTP YIQKAEAYES VVRIEGSLGQ VAVSTCFSPR RAIDAVLHGT 351 400 ENSBTAP00000056571/1-537 QEQETAAASS QRLWVLYRIE KMFLQLLEIE DGQQDAPAQP RDSEQRSSRV ENSP00000416673/1-543 QEQDIEAASS QRLRVLYRIE KMFLQLLEIE EGWKYRPPPP CFSEQQSNQV bmy_12687T0/1-596 QEQETGAASS QRLQVLYRIE KLFLQLLEIE EGQKDGPAQP C--EQQSSQL BACU002844/1-347 QEQEAGAASS QRLQVLYRIE KLFLQLLEIE EGQKDGPAQP C--EQQSSQL 401 450 ENSBTAP00000056571/1-537 EKLFQALKAQ GQNNLEAADD GFLQALSVGK GKALVARLLP ILPRDRAVSL ENSP00000416673/1-543 EKLFQTLKTQ EQNNLEEAAD GFLQVLSVRK GKALVARLLP FLPQDQAVTI bmy_12687T0/1-596 EKLFQALKTQ EQNNLEEAAD GFLQVLSVRK GKALVARLLP FLPRDRTVSL BACU002844/1-347 EKLFQALKTQ EQNNLEEAAD GFLQVLSVRK GKALVARLLP FLPRDRTVSL 451 500 ENSBTAP00000056571/1-537 LLAITRHLPF LVKRDVADQA LQMLFQPLSK CIRHLTFREL LQGLQGLMRL ENSP00000416673/1-543 LLAITHHLPL LVRRDVADQA LQMLFKPLGK CISHLTLHEL LQGLQGLTLL bmy_12687T0/1-596 LLAITRHLPL LVKRDVADQA LQTLFEPLGK CISHLTFHEL LQGLQGLMLQ BACU002844/1-347 LLAITRHLPL LVKRDVADQA LQTLFEPLGK CISHLTFHEL LQGLQGLMLQ 501 550 ENSBTAP00000056571/1-537 PPGSSERPIT MVLQNQFGIS LLYALLSHGE QLVSLNSSLK EPSSDHSAWT ENSP00000416673/1-543 PPGSSERPVT VVLQNQFGIS LLYALLSHGE QLVSLHSSLE EPNSDHTAWT bmy_12687T0/1-596 PPGSSERPVT VVLQNQFGIS LLYALLSHGE QLISLDSSLE EPNSDHTAWT BACU002844/1-347 PPGSSERPVT VVLQHQFGIS LLYALLSHGE QLISLDSSLE EPNSDHTAWT 551 600 ENSBTAP00000056571/1-537 DMVVLTAWEI AQMPTASLAE PLAFPSNLLP LFCHHVDKQL VQKLEARMEY ENSP00000416673/1-543 DMVVLIAWEI AQMPTASLAE PLAFPSNLLP LFCHHVDKQL VQQLEARMEF bmy_12687T0/1-596 DMVVLTAWEI AQMPTASLAE PLAFPSNLLP LFCHHVDKQL VQQLEARMEF BACU002844/1-347 DMVVLTAWEI AQMPTASLAE PLAFPSNLLP LFCHHVDKQL VQQLEARME- 601 650 ENSBTAP00000056571/1-537 VTVEIRS ENSP00000416673/1-543 AWIY--- bmy_12687T0/1-596 ALIY--- BACU002844/1-347 -------