KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:46 2014 Check: 00 .. Name: ENSP00000319118/1-304 Len: 356 Check: 6340 Weight: 1.00 Name: ENSBTAP00000056580/1-305 Len: 356 Check: 3438 Weight: 1.00 Name: ENSTTRP00000010899/1-302 Len: 356 Check: 1955 Weight: 1.00 Name: bmy_17857T0/1-304 Len: 356 Check: 6295 Weight: 1.00 Name: BACU002234/1-355 Len: 356 Check: 9322 Weight: 1.00 // 1 50 ENSP00000319118/1-304 MSRSFYVDSL IIKDTSRPAP SLPEPHPGPD FFIPLGMPPP LVMSVSGPGC ENSBTAP00000056580/1-305 MSRSFYVDSL IIKDSSRPAP SLPEPHPGPD FFIPLGMPSP LVMSMSGPGC ENSTTRP00000010899/1-302 MSRSFYVDSL IIKDSSRPAP SLPEPHPGPD FFIPLGMPSP LVMSVSGTGC bmy_17857T0/1-304 MSRSFYVDSL IIKDSSRPAP SLPEPHPGPD FFIPLGMPSP LVMSVSGTGC BACU002234/1-355 MSRSFYVDSL IIKDSSRPAP SLPEPHPGPD FFIPLGMPSP LVMSVSGTGC 51 100 ENSP00000319118/1-304 PSRKSGAFCV CPLCVTSHLH SSRGSVGAGS GGAGAGVTGA GGSGVAGAAG ENSBTAP00000056580/1-305 ASRKSGAFCV CPLCVTSHLH SSRGPASSGG GNAGAGTAGA AGGGAAGAAG ENSTTRP00000010899/1-302 PSRKSGAFCV CPLCVTSHLH SPRGPASSNC GSAGTGSAGD GGGGAAAAAG bmy_17857T0/1-304 PSRKSGAFCV CPLCVTSHLH SPRGPASSSG GSAGTGSAGA GGGGAAAAAG BACU002234/1-355 PSRKSGAFCV CPLCVTSHLH SPRGPASSSG GSAGTGSAGA GVGGAAAAAG 101 150 ENSP00000319118/1-304 ALPLLKGQFS SAPGDAQFCP RVNHAHHHHH PPQHHHHHHQ PQQPGSAAAA ENSBTAP00000056580/1-305 ALPLLKSQFS SGPGDAQFCP RVSHAHHHHH PPQHHHHHHQ PQQPGSAAAA ENSTTRP00000010899/1-302 ALPLL-SQFS SGPGDAQF-P RVSHAHHHHH PPQHHHHHHQ PQQPGAAAAA bmy_17857T0/1-304 ALPLLKSQFS SGPGDAQFCP RVSHAHHHHH PPQHHHHHHQ PQQPGSAAAA BACU002234/1-355 ALPLLKSQFS SGPGDAQFCP RVSHAHHHHH PPQHHHHHHQ PQQPGSAAAA 151 200 ENSP00000319118/1-304 AAAAA-AAAA AAALGHPQHH APVCTATTYN VADPRRFHCL TMGGSDASQV ENSBTAP00000056580/1-305 AAAAAAAAAA AAALGHPQHH APVCTATTYN VADPRRFHCL TMGGSDTSQV ENSTTRP00000010899/1-302 AAAAA-AAAA AAALGHPQHH APVCTATTYN VADPRRFHCL TMGGSEASQV bmy_17857T0/1-304 AAAAA-AAAA AAALGHPQHH APVCTATTYN VADPRRFHCL TMGGSDASQV BACU002234/1-355 AAAAA-AAAA AAALGHPQHH APVCTATTYN VADPRRFHCL TMGGSDASQV 201 250 ENSP00000319118/1-304 PNGKRMRTAF TSTQLLELER EFSSNMYLSR LRRIEIATYL NLSEKQVKIW ENSBTAP00000056580/1-305 PNGKRMRTAF TSTQLLELER EFSSNMYLSR LRRIEIATYL NLSEKQVKIW ENSTTRP00000010899/1-302 PNGKRMRTAF TSTQLLELER EFSSNMYLSR LRRIEIATYL NLSEKQVKIW bmy_17857T0/1-304 PNGKRMRTAF TSTQLLELER EFSSNMYLSR LRRIEIATYL NLSEKQVKIW BACU002234/1-355 PNGKRMRTAF TSTQLLELER EFSSNMYLSR LRRIEIATYL NLSEKQVKIW 251 300 ENSP00000319118/1-304 FQNRRVKHKK EGKGTQRNSH AGCKCVGSQV HYARSEDEDS LSPASANDDK ENSBTAP00000056580/1-305 FQNRRVKHKK EGKGTQRNSH AGCKCVGSQA HFARSEDEDS LSPASANDDK ENSTTRP00000010899/1-302 FQNRRVKHKK EGKGTQRNSH TGCKCVGNQA HYARSEDEDS LSPVSANDDK bmy_17857T0/1-304 FQNRRVKHKK EGKGTQRNSH TGCKCVGSQA HYARSEDEDS LSPVSANDDK BACU002234/1-355 FQNRRVKHKK EGKGTQRNSH TGCKCVGSQA HYARSEDEDS LSPVSANDDK 301 350 ENSP00000319118/1-304 EISPL----- ---------- ---------- ---------- ---------- ENSBTAP00000056580/1-305 EISPL----- ---------- ---------- ---------- ---------- ENSTTRP00000010899/1-302 EISPL----- ---------- ---------- ---------- ---------- bmy_17857T0/1-304 EISPL----- ---------- ---------- ---------- ---------- BACU002234/1-355 XXXXXXXXPP PPTPARNPPP TTTRRGRHPG AQILGLSVVP PGEGGDEYSR 351 400 ENSP00000319118/1-304 ------ ENSBTAP00000056580/1-305 ------ ENSTTRP00000010899/1-302 ------ bmy_17857T0/1-304 ------ BACU002234/1-355 GLTCRA