KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:50 2014 Check: 00 .. Name: ENSP00000294740/1-895 Len: 985 Check: 3218 Weight: 1.00 Name: ENSBTAP00000056616/1-463 Len: 985 Check: 3508 Weight: 1.00 Name: bmy_12589T0/1-899 Len: 985 Check: 7541 Weight: 1.00 Name: ENSTTRP00000004059/1-707 Len: 985 Check: 569 Weight: 1.00 Name: BACU018877/1-706 Len: 985 Check: 7229 Weight: 1.00 // 1 50 ENSP00000294740/1-895 MKIGSGFLSG GGGTGSSGGS GSGGGGSGGG GGGGSSGRRA EMEPTFPQGM ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004059/1-707 ---------- ---------- ---------- ---------- ---------- BACU018877/1-706 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000294740/1-895 VMFNHRLPPV TSFTRPAGSA APPPQCVLSS STSAAPAAEP PPPPAPDMTF ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 ---------- ---------- -------MLA LESVGRYCSV DFCNNEKMNS ENSTTRP00000004059/1-707 ---------- ---------- ---------- ---------- ---------- BACU018877/1-706 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000294740/1-895 KKEPAASAAA FPSQRTSWGF LQSLVSIKQE KPADPEEQQS HHHHHHHHYG ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 TSTISDVLGL FIFLIYGVYN TESLVSIKQE KPADPEEPPG ---APHPHYG ENSTTRP00000004059/1-707 ---------- ---------- ---------- ---------- ---------- BACU018877/1-706 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000294740/1-895 GLFAGAEERS PGLGGGEGGS HGVIQDLSIL HQHVQQQPAQ HHRDVLLSSS ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 GLFAGADERA PGLGAGDAGC PGVIQDLSVL H---PPPPAP HPRDVLL--- ENSTTRP00000004059/1-707 ---------- ---------- ---------- -------PAP HPRDVLL--- BACU018877/1-706 ---------- ---------- ---------- -------PAP HPRDVLL--- 201 250 ENSP00000294740/1-895 SRTDDHHGTE EPKQDTNVKK AKRPKPESQG IKAKRKPSAS SKPSLVGDGE ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 GRTDDPRGPE EPKPDASVKK AKRPKPESQG IKAKRKPGAS SKPPLAGDGE ENSTTRP00000004059/1-707 GRTDDPRGPE EPKPDASVKK AKRPKPESQG IKAKRKPGAS SKPSLAGDGE BACU018877/1-706 GRTDDPRGPE EPKPDASVKK AKRPKPESQG IKAKRKPGAS SKASLAGDGE 251 300 ENSP00000294740/1-895 GAILSPSQKP HICDHCSAAF RSSYHLRRHV LIHTGERPFQ CSQCSMGFIQ ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 GAVLSPSQKP HICDHCSAAF RSSYHLRRHV LIHTGERPFQ CSQCSMGFIQ ENSTTRP00000004059/1-707 GAVLSPSQKP HICDHCSAAF RSSYHLRRHV LIHTGERPFQ CSQCSMGFIQ BACU018877/1-706 GAVLSPGQKP HVCDHCSAAF RSSYHLRRHV LIHTGERPFQ CSQCSMGFIQ 301 350 ENSP00000294740/1-895 KYLLQRHEKI HSREKPFGCD QCSMKFIQKY HMERHKRTHS GEKPYKCDTC ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 KYLLQRHEKI HSREKPFGCD QCSMKFIQKY HMERHKRTHS GEKPYKCDTC ENSTTRP00000004059/1-707 KYLLQRHEKI HSREKPFGCD QCSMKFIQKY HMERHKRTHS GEKPYKCDTC BACU018877/1-706 KYLLQRHEKI HSREKPFGCD QCSMKFIQKY HMERHKRTHS GEKPYKCDTC 351 400 ENSP00000294740/1-895 QQYFSRTDRL LKHRRTCGEV IVKGATSAEP G-SSNHTNMG NLAVLSQGNT ENSBTAP00000056616/1-463 ---------- ---------- ---------- ---------- ---------- bmy_12589T0/1-899 QQYFSRTDRL LKHRRTCGEA LAKGAPSAEP GSSSNHSNIG NLAVLSQGST ENSTTRP00000004059/1-707 QQYFSRTDRL LKHRRTCGEA LAKGAPSAEP GSSSNHSTVG NLAVLSQGST BACU018877/1-706 QQYFSRTDRL LKHRRTCGEA LAKGAPSAEP GSSSNHSNIG NLAVLSQGST 401 450 ENSP00000294740/1-895 SSSRRKTKSK SIAIENKEQK TGKTNESQIS NNINMQSYSV EMPTVSSSGG ENSBTAP00000056616/1-463 ---------- ---------- ---------- ----TQSYSV EMPAVPSSGG bmy_12589T0/1-899 SSSRRKAKSR SIAVENKEPK TGKANESHMS NSINMQSYSV EMPTVSSSGG ENSTTRP00000004059/1-707 SSSRRKAKSR SIAVENKEPK TGKANESHMS NSINMQSYSV EMPAVSSSGG BACU018877/1-706 SSSRRKAKSR SIAVENKEPK TGKANESHMS NSINMQSYSV EMPTVSSSGG 451 500 ENSP00000294740/1-895 IIGTGIDELQ KRVPKLIFKK GSRKNTDKNY LNFVSPLPDI VGQKSLSGKP ENSBTAP00000056616/1-463 IVGPDIDELQ KRVPKLIFKK GSRKSTDKSY LNFVSPLPDL VGQKSLSGKP bmy_12589T0/1-899 IIGTGIEELQ KRVPKLIFKK GSRKSMDKNY LNFVSPLPDI VGQKSLSGKP ENSTTRP00000004059/1-707 IIGTGIEELQ KRVPKLIFKK GSRKSMDKNY LNFVSPLPDI VGQKSLSGKP BACU018877/1-706 IIGAGIEELQ KRVPKLIFKK GSRKSMDKNY LNFVSPLPDI VGQKSLSGKP 501 550 ENSP00000294740/1-895 SGSLGIVSNN SVETIGLLQS TSGKQGQISS NYDDAMQFSK KRRYLPTASS ENSBTAP00000056616/1-463 SGSLGIVSNS SVETISLLQS TGGKQGQISS NYDDAMQFSK KRRYLPTASS bmy_12589T0/1-899 SGSLGIVSNS SVETISLLQS TSGKQGQISS NYDDAMQFSK KRRYLPTASS ENSTTRP00000004059/1-707 SGSLGIVSNS SVETISLLQS TSGKQGQISS NYDDAMQFSK KRRYLPTASS BACU018877/1-706 SGSLGIVSNS SVETISLLQS TSGKQGQISS NYDDAMQFSK KRRYLPTASS 551 600 ENSP00000294740/1-895 NSAFSINVGH MVSQQSVIQS AGVSVLDNEA PLSLIDSSAL NAEIKSCHDK ENSBTAP00000056616/1-463 NSAFSVSVGH MVSPQSVIQS AGVGVLDSEA PLSLIDSSAL NAEIKSCHDK bmy_12589T0/1-899 NSAFSVNVGH MVSQQSVIQS AGVGVLDNEA PLSLIDSSAL NAEIKSCHDK ENSTTRP00000004059/1-707 NSAFSVNVGH MVSQQSVIQS AGVGVLDSEA PLSLIDSSAL NAEIKSCHDK BACU018877/1-706 NSAFSVNVGH MVSQQSVIQS AGVGVLDNEA PLSLIDSSAL NAEIKSCHDK 601 650 ENSP00000294740/1-895 SGIPDEVLQS ILDQYSNKSE SQKEDPFNIA EPRVDLHTSG EHSELVQEEN ENSBTAP00000056616/1-463 SGIPDEVLQS ILDQYSNKSE SQKEDPFSIA EPRVDLHASG EHSELVQEEN bmy_12589T0/1-899 SGIPDEVLQS ILDQYSNKSE SQKEDPFNIT EPRVDLHASG EHSELVQEEN ENSTTRP00000004059/1-707 SGIPDEVLQS ILDQYSNKSE SQKEDPFNIT EPRVDLHASG EHSELVQEEN BACU018877/1-706 SGIPDEVLQS ILDQYSNKSE SQKEDPFNIT EPRVDLHAS- EHSELVQEEN 651 700 ENSP00000294740/1-895 LSPGTQTPSN DKASMLQEYS KYLQQAFEKS TNASFTLGHG FQFVSLSSPL ENSBTAP00000056616/1-463 LSPGTQTPSN DKASMLQEYS KYLQQAFEKS TNAGFTLGHG FQFVSLSSPL bmy_12589T0/1-899 LSPGTQTASN DKASMLQEYS KYLQQAFEKS TNAGFTLGHG FQFVSLSSPL ENSTTRP00000004059/1-707 LSPGTQTASS DKASMLQEYS KYLQQAFEKS TNAGFTLGHG FQFVSLSSPL BACU018877/1-706 LSPGTQTASN DKASMLQEYS KYLQQAFEKS TNAGFTLGHG FQFVSLSSPL 701 750 ENSP00000294740/1-895 HNHTLFPEKQ IYTTSPLECG FGQSVTSVLP SSLPKPPFGM LFGSQPGLYL ENSBTAP00000056616/1-463 HNHTLFPEKQ IYTTSPLECG FGQSVTSVLP SSLPKPPFGM LFGSQPGLYL bmy_12589T0/1-899 HNHTLFPEKQ IYTTSPLECG FGQSVTSVLP SSLPKPPFGM LFGSQPGLYL ENSTTRP00000004059/1-707 HNHTLFPEKQ IYTTSPLECG FGQSVTSVLP SSLPKPPFGM LFGSQPGLYL BACU018877/1-706 HNHTLFPEKQ IYTTSPLECG FGQSVTSVLP SSLPKPPFGM LFGSQPGLYL 751 800 ENSP00000294740/1-895 SALDATHQQL TPSQELDDLI DSQKNLETSS AFQSSSQKLT SQKE-QKNLE ENSBTAP00000056616/1-463 SALDATHQQL TPSQELDDLI DSQKNLETSS AFQSSSQKLT SQKEQQKNLE bmy_12589T0/1-899 SALDATHQQL TPSQELDDLI DSQKNLETSS AFQSSSQKLT SQKEQQKNLE ENSTTRP00000004059/1-707 SALDATHQQL TPSQELDDLI DSQKNLETSS AFQSSSQKLT SQKEQQKNLE BACU018877/1-706 SALDATHQQL TPSQELDDLI DSQKNLETSS AFQSSSQKLT SQKEQQKNLE 801 850 ENSP00000294740/1-895 SSTGFQIPSQ ELASQIDPQK DIEPRTTYQI ENFAQAFGSQ FKSGSRVPMT ENSBTAP00000056616/1-463 SSTSFQIPSQ ELASQIDPQK DVEPRTTYQI ENFAQAFGSQ FKSGSRVPMT bmy_12589T0/1-899 SSASFQIPSQ ELAGQMDPQK DVEPRTTYQI ENFAQAFGSQ FKSGSRVPMT ENSTTRP00000004059/1-707 SSTSFQIPSQ ELAGQMDPQK DVEPRTTYQI ENFAQAFGSQ FKSGSRVPMT BACU018877/1-706 SSTSFQIPSQ ELAGQMDPQK DVEPRTTYQI ENFAQAFGSQ FKSGSRVPMT 851 900 ENSP00000294740/1-895 FITNSNGEVD HRVRTSVSDF SGYTNMMSDV SEPCS----- ---------- ENSBTAP00000056616/1-463 FITNSNGEVD HRARTSVSDF SGYTNMMSDV SEPCS----- ---------- bmy_12589T0/1-899 FITNSNGEVD HRARTSVSDF SGYTNMMSDA PSPYPNCNKA VTPSGVDGNS ENSTTRP00000004059/1-707 FITNSNGEVD HRARTSVSDF SGYTNMMSDV SEPCS----- ---------- BACU018877/1-706 FITNSNGEVD HRARTSVSDF SGYTNMMSDV SEPCS----- ---------- 901 950 ENSP00000294740/1-895 ---------- ---------- ----TRVKTP TSQS------ ---------- ENSBTAP00000056616/1-463 ---------- ---------- ----TRVKTP TSQS------ ---------- bmy_12589T0/1-899 VEVQVNPHRC PCIIKPHMLR AVDINKVVIP TGDKADVRVA ANVEKSIKIS ENSTTRP00000004059/1-707 ---------- ---------- ----TRGKTP TSQS------ ---------- BACU018877/1-706 ---------- ---------- ----TRGKTP TSQS------ ---------- 951 1000 ENSP00000294740/1-895 ---------- -----YR--- ---------- ----- ENSBTAP00000056616/1-463 ---------- -----YR--- ---------- ----- bmy_12589T0/1-899 KGRIGRGFAF FLQTVYKYFY LKFSFLYYTH QMTGA ENSTTRP00000004059/1-707 ---------- -----YR--- ---------- ----- BACU018877/1-706 ---------- -----YR--- ---------- -----