KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:53 2014 Check: 00 .. Name: BACU007415/1-521 Len: 522 Check: 2672 Weight: 1.00 Name: ENSTTRP00000000949/1-294 Len: 522 Check: 508 Weight: 1.00 Name: ENSP00000360671/1-298 Len: 522 Check: 3679 Weight: 1.00 Name: bmy_10753T0/1-298 Len: 522 Check: 2817 Weight: 1.00 Name: ENSBTAP00000056626/1-322 Len: 522 Check: 4836 Weight: 1.00 // 1 50 BACU007415/1-521 MQRDWSIRFV VLFTDDLGHI SQWRSIMAGS LAGMVSTIVT YPTDLIKTRL ENSTTRP00000000949/1-294 ---------- ---------- ---------- ---------- -KTD------ ENSP00000360671/1-298 ---------- ---------- ---------- ---------- -MTD------ bmy_10753T0/1-298 ---------- ---------- ---------- ---------- -MTD------ ENSBTAP00000056626/1-322 ---------- ---------- ----ALASGS NKTLQ----- -PSPFERSSA 51 100 BACU007415/1-521 IVQNMLEPSY RGILHAFSTI YQQEGFLALY RGVSLTILVY MNLEKIWNGP ENSTTRP00000000949/1-294 ---------- ---------- ---------- ---------- ---------- ENSP00000360671/1-298 ---------- ---------- ---------- ---------- ---------- bmy_10753T0/1-298 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056626/1-322 NSHQMTD--- ---------- ---------- ---------- ---------- 101 150 BACU007415/1-521 RDRLSLLQNF ANVCLAAAVT QTLSFPFDTV KRKMQAQSPY LPHCGGVDVH ENSTTRP00000000949/1-294 ---AACLKD- SAGGVAAAIS KTAVAPIDQV L--------- ---------- ENSP00000360671/1-298 -AAVSFAKDF LAGGVAAAIS KTAVAPIERV KL-------- ---------- bmy_10753T0/1-298 -AAVSFAKDF LAGGVAAAIS KTAVAPIERV KL-------- ---------- ENSBTAP00000056626/1-322 -AAVSFAKDF LAGGVAAAIS KTAVAPIERV KL-------- ---------- 151 200 BACU007415/1-521 FSGAVDCFRQ IVKAQGVLGL WNGLAANLLK VQHASKQITA DKQYKGIIDC ENSTTRP00000000949/1-294 ---------- ---------- -------LLQ VQHASKQITA DKQYKGIIDC ENSP00000360671/1-298 ---------- ---------- -------LLQ VQHASKQITA DKQYKGIIDC bmy_10753T0/1-298 ---------- ---------- -------LLQ VQHASKQITA DKQYKGIIDC ENSBTAP00000056626/1-322 ---------- ---------- -------LLQ VQHASKQITA DKQYKGIIDC 201 250 BACU007415/1-521 VVRIPKEQGV LSFWRGNLAN VIRYFPTQAL NFAFKDKYKQ IFLGGVDKRT ENSTTRP00000000949/1-294 VVRIPKEQGV LSFWRGNLAN VIRYFPTQAL NFAFKDKYKQ IFLGGVDKRT ENSP00000360671/1-298 VVRIPKEQGV LSFWRGNLAN VIRYFPTQAL NFAFKDKYKQ IFLGGVDKRT bmy_10753T0/1-298 VVRIPKEQGV LSFWRGNLAN VIRYFPTQAL NFAFKDKYKQ IFLGGVDKRT ENSBTAP00000056626/1-322 VVRIPKEQGV LSFWRGNLAN VIRYFPTQAL NFAFKDKYKQ IFLGGVDKRT 251 300 BACU007415/1-521 QFWRYFAGNL ASGGAAGATS LCFVYPLDFA RTRLAADVGK AGAEREFRGL ENSTTRP00000000949/1-294 QFWRYFAGNL ASGGAAGATS LCFVYPLDFA RTRLAADVGK AGAEREFRGL ENSP00000360671/1-298 QFWLYFAGNL ASGGAAGATS LCFVYPLDFA RTRLAADVGK AGAEREFRGL bmy_10753T0/1-298 QFWRYFAGNL ASGGAAGATS LCFVYPLDFA RTRLAADVGK AGAEREFRGL ENSBTAP00000056626/1-322 QFWRYFAGNL ASGGAAGATS LCFVYPLDFA RTRLAADVGK AGAEREFRGL 301 350 BACU007415/1-521 GDCLVKIYKS DGIKGLYQGF NVSVQGIIIY RAAYFGIYDT AKGMLPDPKN ENSTTRP00000000949/1-294 GDCLVKIYKS DGIKGLYQGF NVSVQGIIIY RAAYFGIYDT AKGMLPDPKN ENSP00000360671/1-298 GDCLVKIYKS DGIKGLYQGF NVSVQGIIIY RAAYFGIYDT AKGMLPDPKN bmy_10753T0/1-298 GDCLVKIYKS DGIKGLYQGF NVSVQGIIIY RAAYFGIYDT AKGMLPDPKN ENSBTAP00000056626/1-322 GDCLVKIYKS DGIRGLYQGF NVSVQGIIIY RAAYFGIYDT AKGMLPDPKN 351 400 BACU007415/1-521 THIFISWMIA QSVTAVAGLT SYPFDTVRRR MMMQSGRKGK GDQSPVESFP ENSTTRP00000000949/1-294 THIFISWMIA QSVTAVAGLT SYPFDTVRRR MMMQSGRKGT D--------- ENSP00000360671/1-298 THIVISWMIA QTVTAVAGLT SYPFDTVRRR MMMQSGRKGT D--------- bmy_10753T0/1-298 THIFISWMIA QSVTAVAGLT SYPFDTVRRR MMMQSGRKGT D--------- ENSBTAP00000056626/1-322 THIFISWMIA QSVTAVAGLT SYPFDTVRRR MMMQSGRKGT D--------- 401 450 BACU007415/1-521 SQCLLGRVAL AAELGAALSL PKDVYAVMAM GLGPEGLQSK KTAW-NPGPD ENSTTRP00000000949/1-294 -------IMY TGTL------ --DCWRKIAR DEGAKAFF-- KGAWSNVLRG ENSP00000360671/1-298 -------IMY TGTL------ --DCWRKIAR DEGGKAFF-- KGAWSNVLRG bmy_10753T0/1-298 -------IMY TGTL------ --DCWRKIAR DEGAKAFF-- KGAWSNVLRG ENSBTAP00000056626/1-322 -------IMY TGTL------ --DCWRKIAR DEGAKAFF-- KGAWSNVLRG 451 500 BACU007415/1-521 LGGHQRSFYR IVIPVEMASA FPTEGTYDSC PNYKHYPPQM AHRILRIGRL ENSTTRP00000000949/1-294 MGGA----FV LVL------- ------YDEI KKFT------ ---------- ENSP00000360671/1-298 MGGA----FV LVL------- ------YDEI KKYT------ ---------- bmy_10753T0/1-298 MGGA----FV LVL------- ------YDEI KKFT------ ---------- ENSBTAP00000056626/1-322 MGGA----FV LVL------- ------YDEI KKFT------ ---------- 501 550 BACU007415/1-521 IDSLIPKALH EWQPTAKPHA KY ENSTTRP00000000949/1-294 ---------- ---------- -- ENSP00000360671/1-298 ---------- ---------- -- bmy_10753T0/1-298 ---------- ---------- -- ENSBTAP00000056626/1-322 ---------- ---------- --