KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:28:53 2014 Check: 00 .. Name: ENSP00000372959/1-301 Len: 301 Check: 3937 Weight: 1.00 Name: ENSBTAP00000056638/1-229 Len: 301 Check: 5956 Weight: 1.00 Name: bmy_01650T0/1-301 Len: 301 Check: 4119 Weight: 1.00 Name: BACU017048/1-301 Len: 301 Check: 3131 Weight: 1.00 Name: ENSTTRP00000002732/1-301 Len: 301 Check: 3371 Weight: 1.00 // 1 50 ENSP00000372959/1-301 MGARQSRASS KDKGPKRMLF TGRRQKFSPW DDALLSGRDP RSLLKRGMHH ENSBTAP00000056638/1-229 ---------- ---------- ---------- ---------- ---------- bmy_01650T0/1-301 MGARQSVARC KDKGPPGRGV LRGRQKFSPW DDALLSGRDP RCLLKRGLRH BACU017048/1-301 MGARQSVARC KDKGPPGRGV LRGRQKFSPW DDALLSGRDP RCLLKRGLRH ENSTTRP00000002732/1-301 MGARQSGARC KDKGLPGRGV LRGRQKFSPW DDALLSGRDP RCLLKRGLRH 51 100 ENSP00000372959/1-301 VSFSLVTRGM TDIPDFLWGL SEVQKLNLSH NQLRVLPPEV GKLTRIVVLN ENSBTAP00000056638/1-229 ---------- ---------- --MQKLNLSH NQLRAVPPEL GKLTRLVVLN bmy_01650T0/1-301 VSFSLVTKGM TDAPDFLWSL SEVQKLNLSH NQLRVLPPEV GKLTRLVVLN BACU017048/1-301 VSFSLVTKGM TDAPDFLWSL SEVQKLNLSH NQLRVLPPEV GKLTRLVVLN ENSTTRP00000002732/1-301 VSFSLVTKGM TDAPDFLWSL SEVQKLNLSH NQLRALPPEV GKLTRLVVLN 101 150 ENSP00000372959/1-301 LCGNRLKSLP REVSLLQCLK VLFVNMNCLT EVPAELSLCR KLEVLSLSHN ENSBTAP00000056638/1-229 LCGNRLKTLP GEVSLLQSLK VLFVHMNGLT ELPAELGACR SLEVLSASHN bmy_01650T0/1-301 LCGNRLKTLP REVSLLQSLK VLFVHMNCLT ELPAELSACR NLEVLSLSHN BACU017048/1-301 LCGNRLKTLP REVSLLQSLK VLFVHMNCLT ELPAELSACR NLEVLSLSHN ENSTTRP00000002732/1-301 LCGNRLKTLP REVSLLQSLK VLFVHMNCLT ELPAELSACR NLEVLSLSHN 151 200 ENSP00000372959/1-301 CLSQLPACFA DLSRLRKLNL SNNFFAHIPM CVFSLKELIF LHVGSNRLEN ENSBTAP00000056638/1-229 CLSQLPTSLA DLSRLRKLNL SHNRFAHIPV CVFSLKELDF LHVGSNRLEN bmy_01650T0/1-301 FLSQLPASLA DLSRLRKLNL SHNRFAHIPV CVFSLRELDF LHVGSNRLEN BACU017048/1-301 FLSQLPASLA DLSRLRKLNL SHNRFAHIPV CVFSLRELDF LHVGSNRLEN ENSTTRP00000002732/1-301 FLSQLPASLA DLSRLRKLNL SHNRFAHIPV CVFSLRELDF LHVGSNRLEN 201 250 ENSP00000372959/1-301 IAESIQHLAS LQIFIAEGNN IHSFPRSLCL VTSLELLNLN NNDIQTLPSE ENSBTAP00000056638/1-229 IAESIQCLAG LQIFIAEGNH IHTFPRSLCL LTSLELLNLN NNDIQMLPAE bmy_01650T0/1-301 IAESIQCLAS LQIFIAESNN IHTFPRSLCL LTRLELLNLN NNDIQTLPEE BACU017048/1-301 IAESIQCLAS LQIFIAESNN IHAFPRSLCL LTRLELLNLN NNDIQTLPEE ENSTTRP00000002732/1-301 IAESIQCLAS LQIFIAESNN IHTFPRSLCL LTSLELLNLN NNDIQTLPEE 251 300 ENSP00000372959/1-301 LHLLCRLVRI AWNPMDKGLH ISHNPLSKPL PELVEGGLEM LFGYLKDKKH ENSBTAP00000056638/1-229 LYMLCRLTRI AWNPMDKGLH ISRNPLSKPL PELLEGGLEM LVSYLKDRKH bmy_01650T0/1-301 LYLLCRLARI AWNPMDKGLH ISHNPLSKPL PELLEGGLEM LFSYLKDKKH BACU017048/1-301 LYLLCRLARI AWNPMDKGLH ISHNPLSKPL PELLEGGLEM LFSYLKDKKH ENSTTRP00000002732/1-301 LYLLCRLARI AWNPMDKGLH ISHNPLSKPL PELLEGGLEM LFSYLKDKKH 301 350 ENSP00000372959/1-301 T ENSBTAP00000056638/1-229 T bmy_01650T0/1-301 T BACU017048/1-301 T ENSTTRP00000002732/1-301 T