Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFRSF21 ENSTTRG00000006613 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor receptor superfamily, member 21

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006257, Bottlenosed dolphin)

Protein Percentage 92.66%
cDNA percentage 93.32%
Ka/Ks Ratio 0.37857 (Ka = 0.0525, Ks = 0.1388)

TNFRSF21 ENSBTAG00000020054 (Cow)

Gene Details

tumor necrosis factor receptor superfamily member 21

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026719, Cow)

Protein Percentage 84.62%
cDNA percentage 86.24%
Ka/Ks Ratio 0.32028 (Ka = 0.1106, Ks = 0.3454)

TNFRSF21  (Minke Whale)

Gene Details

tumor necrosis factor receptor superfamily, member 21

External Links

Gene match (Identifier: BACU015837, Minke Whale)

Protein Percentage 89.12%
cDNA percentage 90.99%
Ka/Ks Ratio 0.56798 (Ka = 0.0843, Ks = 0.1484)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1629 bp    Location:1223692..1257106   Strand:+
>bmy_00007
ATGTCATTAGGCACCAACATGATGAACAGAAGAAACAGGAAATGCGATGAAGAGTTTGATCGTCGGCTTGGAATCTGGGTGTCTAGGAATGGTTGTAAAGGCTTCATAGAGAAGCTTGGATTCCTCAGTACCACCAGGGCTCAGCCGGAACAGAAGGCCCCAAGTCTCATTGGCAAATACCACCATGTCGACCGTGTCACCGGCCAGGTGCTTACCTGTGACAAGTGTCCGGCAGGAACCTATGTGTCTGAGCACTGTACCAACACAAGCCTGCGTGTCTGCAGCAGCTGCCCCATGGGGACCTTTACCAGACACGAGAATGGCATTGAGAAATGCCACGGGTGTAGTCAGCCATGCCCCTGGCCGATGATTGAGAAATTACCTTGTGCTGCCTTGACTGACCGAGAATGCACTTGCCCACCTGGCATGTTCCAGTCAAATGGTACCTGCGCCCCCCACACGGTGTGCCCTGTGGGTTGGGGGGTGCGGAAGAAGGGGACAGAGATGGAGGACGTACGGTGTAAGCAGTGTGCTCGGGGGACCTTCTCTGATGTGCCTTCCAGTGTGAGGAGATGCAGAGCATACACAGACTGTCTGAGTCAGAACCTGGCGGTGATCAGGCTGGGGACCAAGGAGGCAGACAACGTCTGTGGCACGCTCCCGCCCCTCTCCAGCACCACCCCTCCTTCCCCTGGCACAATCAGCCTTTCCCGCCCTGAGCACGTGGAACCCCACGAAGTCCCTTCCTCCACTTATGTTCCCAAAGGCATGAACTCAACAGAATCCAACTCTTCTGCCTCTGTTAGACCAAAGGTGCCGAGTGGCATCCAGGAAGGGACAGTCCCTGAGAACACAAGCTCAGCGAAGGGGGAGGAAGGCATGAACAAGACCCTCCCAAACCTCCAGGTAGTCAACCACCAGCAAGGCCCCCACCACAGACACATCCTGAAGCTGCTGCCATCCATGGAGGCCACTGGGGGCGAGAAGTCCAGCACGCCCATCAAAGGCCTCAAGAGGGGCCATCCCAGGCAGAACCCRCACAAGCATTTTGACATCAATGAGCATCTGCCGTGGATGATCGTGCTTTTCCTGCTGCTGGTGCTTGTGGTGATAGTGGTGTGCAGTATCCGGAAAAGCTCGAGGACTCTGAAGAAGGGGCCCCGGCAGGATCCCAGCACCATTGTGGAAAAGGCGGGGCTCAAGAAATCCATGACCCCCACCCAGAACCGGGAGAAGTGGATCTACTACTGCAATGGCCACGGTATTGACATCCTGAAGCTTGTAGCAGCCCAAGTGGGAAGCCAGTGGAAGGACATCTATCAGCTTCTGTGCAATGCCAGCGAGAGGGAGGTGGCCGCTTTCTCCAACGGGTACACGGCGGACCACGAGCGGGCCTACGCAGCGCTGCAGCACTGGACCATCCGGGGCCCCGAGGCCAGCCTGGCCCAGTTAATTAGCGCCCTGCGCCAGCACCGGCGCAACGATGTCGTGGAGAAGATCCGTGGCCTGATGGAAGATACAGCCCAGCTGCAGGATGCAGCTGTCTTTATCTACAGTGTGACTGAGACCAGCTCTTTTCAGAATTTAATACAGCGAGGAGGAACTTTGATTTATCCACAGTTGGGCTGA

Related Sequences

bmy_00007T0 Protein

Length: 543 aa      View alignments
>bmy_00007T0
MSLGTNMMNRRNRKCDEEFDRRLGIWVSRNGCKGFIEKLGFLSTTRAQPEQKAPSLIGKYHHVDRVTGQVLTCDKCPAGTYVSEHCTNTSLRVCSSCPMGTFTRHENGIEKCHGCSQPCPWPMIEKLPCAALTDRECTCPPGMFQSNGTCAPHTVCPVGWGVRKKGTEMEDVRCKQCARGTFSDVPSSVRRCRAYTDCLSQNLAVIRLGTKEADNVCGTLPPLSSTTPPSPGTISLSRPEHVEPHEVPSSTYVPKGMNSTESNSSASVRPKVPSGIQEGTVPENTSSAKGEEGMNKTLPNLQVVNHQQGPHHRHILKLLPSMEATGGEKSSTPIKGLKRGHPRQNPHKHFDINEHLPWMIVLFLLLVLVVIVVCSIRKSSRTLKKGPRQDPSTIVEKAGLKKSMTPTQNREKWIYYCNGHGIDILKLVAAQVGSQWKDIYQLLCNASEREVAAFSNGYTADHERAYAALQHWTIRGPEASLAQLISALRQHRRNDVVEKIRGLMEDTAQLQDAAVFIYSVTETSSFQNLIQRGGTLIYPQLG*