Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TDRD6 ENSTTRG00000008440 (Bottlenosed dolphin)

Gene Details

tudor domain containing 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008001, Bottlenosed dolphin)

Protein Percentage 92.89%
cDNA percentage 95.77%
Ka/Ks Ratio 0.62842 (Ka = 0.0382, Ks = 0.0607)

TDRD6 ENSBTAG00000009978 (Cow)

Gene Details

tudor domain-containing protein 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013158, Cow)

Protein Percentage 83.55%
cDNA percentage 89.0%
Ka/Ks Ratio 0.48778 (Ka = 0.0952, Ks = 0.1952)

TDRD6  (Minke Whale)

Gene Details

tudor domain containing 6

External Links

Gene match (Identifier: BACU015831, Minke Whale)

Protein Percentage 96.16%
cDNA percentage 97.55%
Ka/Ks Ratio 0.52788 (Ka = 0.0206, Ks = 0.0391)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6117 bp    Location:1737727..1725090   Strand:-
>bmy_00012
ATGTGCTCAACGCCCGGGCTGCCGACGCCGGGGGCCTCGCTGGTGCTGCGGGTGTCCTTCGTGGACGTGCAGCCCGAGGTGATCCCCGTGCAGCTCTGGGGGCTGGTGGGCGAGCGGCGGGACGAGTACGTGAGGCTGAGCCGGGAGATCCAGGAAGCGGCGGCGGCCGCGCGCGGCCCGTGGGCCCTGGGCGGCACCTCGGCCTCGCCGGGCGAGCTGTGCCTGGTGCAGGCGGGTCTGCGGTGGCACCGCGGCCGCGTGGTCAGCCGGCAGGCGCAGGAGAGCCGCGTCTTCCTGCTGGACGAGGGTCGCACCATCACGGCCGGCGCGGGCTCGCTGGYGCCTGGGCGCAGTGAGTTCTTCCACCTGCCATCGGAGGTGCTGGGCTGCGTGCTGGCTGGCCTGGTGCCTGCGGGCGGCGGCGGGGGCGAGCCCCGGCACTGGGCTGCCAGCGCCGTGGACTTCCTTCGCAACCTGCAGGGCAAGGAGATGAACGGACGGGTCCTGGACGTGCTGCTTCTCCACCGCCTGGTCCTCCTGGAGGTGCCTGAGCTGTCCCAGCAGATGCAGGAGCTCGGCCTGGCCCGGCAGGTGCCCGACGGCCTTTTCCGCTCCCTGCTCAAGCGCTACCTCTCGGCCACCGCGGCTGTCCTGGGCCCTGGGGCCCCGGCCGTCCCGCGAATCCCGCCCAAGCAGGAGCAGCCTGCCCTGGATTACTTCTACCCCCAGCTGCAGCTGGGCGTGACGGAGCCCGTGGTGGTCACCCAGGTGTGCCATCCCCACCGCATTCACTGCCAGCTCCGCAGCCTCTCGCAGGAGATCCACCGCCTCTCCGAGAGCATGGCCCAGATATATAGGGGTTCCCCCGGGACAGGGGATGAGAACTATACCAGTGCCACCTGGGAGGAGAGGGAGGAGAGCCCAGACAAGCCGGGCTCTCCGTGCGCAGCCTGCGGGTTGGATGGACATTGGTACAGAGCGCTCCTGCTTGAGACTTTCCGGCCCCAGCGCTGTGCCCAGGTACTTCATGTGGACTATGGAAGGAAGGAGTTAGTGAGTTGTAGTAGCCTTCGCTACTTGCTGCCCGAATATTTTCGAATGCCCGTGGTGACATACCCTTGCGCTTTGTACGGACTCTGGGACGGTGGCAGAGGCTGGTCTCGGTCACAGGTCAGTGACCTGAAGGCACTGTTGCTGGGCCAGGCAGTGAACGCAAAGATTGAATTTTACTCTTCCTTTGAGCATGTGTATTACGTCACCCTCTATGGAGAAGATGGGATTAATCTTAACTGTGTGTTCGGAGTACAGTCCTGTTGCTTGGCTGACCGATTCCTTCAGAGCCAAGGAATAGAGGAGGAGGAGGGGGGCGGGGAGGAGGAACCGGAAACAGCTTTTCAGTCTCAATCTCCTGCTGAAGAAGTGGATGAAGAGATTTCACTCCCAGCCTTGAGATCTATCAGGTTAAAGATGAACGCCTTCTATGACGCCCAGGTGGAGTTTGTGAAAAATCCTTCTGAGTTTTGGATTAGGTTGAGGAAACACAACGGCACCTTCAGCAAATTGATGAGGAGAATGTGTAGTTTCTATGCCTCTGCCAGTAAGCTGGACGGCGTTGTTTTGAAACCTGAAGCCGATGACCTTTGCTGTGTGAAATGGAAAGAAAGTGGCTATTATCGGGCTATGGTCACCCGATTAGACGACAAGAGTGTGGATGTGTTCTTCGTTGACCGGGGCAATTCAGAAAATATGGACTGGTATGATGTGAGAATGCTGCTCCCTCAGTTTAGGCGGCTACCAATACTGGCCGTGAGGTGCACTCTGTCTGATATTTGGCCTTTGGGAAAAAATTGGAGCCAGGAGGCAATTTCCTTTTTTAAAAAGACTGTGCTCCACAAAGAATTAGTTATCCATGTCCTTGATAAGCAGGATAGTCAGTATGTTATTGAGATTCTTGATGAATCAAGAACAGGGGAAGAAAACATTAGTAAGGTAATTGCTCAGGCTGGATTTGCCAAGTATCAGGAATTTGAAACAAAGGAAAATATTTGCATGAGTGCCCACTCTCCAGGGCATGTTTCAAACCATTTTACTGCAGACAATAACAAAATATCTTCTGCCAAGAAGGAAGTAGAACACAAAGTCAAGAGAGAGGGTGAAACTACAGCTGTTCCAGAAACTGTGAATGACACAACAGTTGTGACAAACGTTTCAACTGGACTAGTTCTACAGGACAAAGAGAAAAGAGTGTCTGTTTATTCTCCTCTTGTACAGAATTTCTTGGACATTAAGCCAGGCTCTTCTTGTAAAGAGGAGCTAGAAGTTGGAAGTACAGTAGAAGTCAAAGTGTCTCATATTGAAAACCCTGGCTATTTCTGGTGCCAGCTGACCAGGAACATAGAAGGATTTAAAGCGCTAATGTGTAGTATTCAGGACCATTGCAAGAATACAGCTACCCCCTACCAGGGAACCACCCCTGCTTGTTTGGCAAAACGAACAGCAAATGGAAAATGGTCCAGAGCTCTGATTACTGGGGCACAGTCTTCAGAGCATGTCAACGTCATATTTGTAGATTATGGAGACAAAGAAACGGTATCTGTGAAGAATATTTATTCAATTAGTGAAGAGTTTCTCAAGGTTAAGGTTCAAGCTTTTAGGTGCAGCCTTTATAATTTAATTCAACCAATGGGTCACAATCCTTTTGTTTGGGATGAAAAGGCAATCCAAGCTTTTAGTGAATTTGTGCATAAGGCATGGGAAGACAATCTAGAATTAAAATGCACAATATTTGCTTTGGCTTCCATTCACGTTGAAGAACTGTTTAATGTCGTGGATTTGCTAACGCCTTTCCAGAGCGCATGCCATTTTTTGGTAGAACAGAGACTTGCAAGACCAGTAAAACTTCAGAAGCCTCTGGAGCCCTCTGTTCAGCTCCATTCTTACTACTATTCTGCACATGATATGAAAATTGGAAGTGAAGAATCAGTGTATATAACACATGTCGATGACCCTTGGACATTTTATTGCCAGCTGGGAAGAAATGCAAATATTTTAGAACAGTTGTCATATCATATTACACAATTAAGTAAAGTTTTGCTGAATTTAAAAACATCTCCCTTGGTCCCTGGCACATTGTGCCTTGCCAGGTATACTGACGGAAACTGGTATAGGGGGATAATCATAGAAAAAGAACCAAATAAAGTCTTCTTTGTTGATTTTGGGAATATTTATGTGGTAACAAATCATGATCTGCTTCCAATACCTAGCGATGCATATGACGTCTTACTTTTGCCCATGCAAGCCATTAAATGTTCATTATCTGATATTCCTGATCACATACCAGAAGAAGTTACAATGCAGTTTCAGGAGACTATTTCAGATAAGTCATTGAAGGCTTTGGTTGTAGCAAAGGATCCAGATGGAAGACTGATTATAGAACTATACGATGACAGTATTCAAATTAATGCTAATATTAATGAGAAGTTAGGACTCCTGGGTTCCAAAGGTGGGACAAGAAAAAAAGAAAGTGAATCATTCCTCTCTACAACTGAAACTCTTGAAGCAAAAAAGGAAGCTGTGAAGTTGTCACCTACAGAGTATTTAAGTAAATCAATAGAGAACAAATCAGACAGTATGGCGATCTTAGGAGAATCATACAAACCTAAGATGAGCTCAGCATGTAAGGAACTCAAATTTTTATGCAGTTCAATGAAGACAAACTTAGTCACTCAATATCAGGACTCTGTGGCAAATAAAAATAATCAAGTGTCTCCATTACCAGTAGAAAAGAAATTAGAAAGTTCGTCTGAGCCCCCTTTGAAAGCCACAAAACTAGAAGCCACTCTTCCAGAGAGAAAAATAGATTCATGTAACAAAGGTTTGCCTCTAAAATTTTCTGAGTTCCCTCAGAAGACTATAATGCCTGGCTTTAAAACAACTGTGTATGTTTCTCATATAAATGACCTTTCAGACTTTTATGTTCAACTAACAGAAGATGAGGCTGAAATTAATCGTCTTTCAGAGAGGTTAAACACTGTTAGAACAAAGCCTGAATATTATGCAGGCCCACCTTTGCAAAGAGGAGATATAATATGTGCTGTTTTCCCAGAAGACAATTTATGGTATCGTGCTGTGGTCAAGGAACAACAACCCAATGACCTTCTCTCTGTGCAGTTTATAGATTATGGCAATGTTTCTGTGGTTCACACCAACACAATAGGCAAACTTGACCTTGTTAATGCACTATTACCCGGACTGTGCATTCACTGTTCCTTAAGGGGACTTGGGGCTCCTAAGATTTTAAACCATAAGGAAATGATGCATTACTTTTCCCGAAGGACAGAGGAGGCTCAAGTAAGATGCGAATTTGTTCAATTTCAAGACAAATGGGAAGTTATTCTTGCTGATGAACATGGGATCATAGCAGAAGATATGATGAGCAGATATGCTTTCAGTGAAAAATCTCAAATAGGACTTTCTACCCAAATAATTAAAGGTGCCTGTTCAAAGTCTGTCAACAAAACAGACGTAGACACTTCTGTATTTCTTAACTGGTATAATCCAAAGATGAAGATGATAAGAGCTTATGCCACGGTGATCGATGGACCTGAATATTTCTGGTGTCAGTTTGCGGACACAGAGAAACTTCAGTATTTAGAAGTGGAAGTACAAACTGCTGGAGAGCAGGTGACAGCTTGGAGAAGCTGCATCCCCTGCCCTCATATTGGAGATCCTTGCATAGTGAGATACAGAGAAGACGGGCATTATTACAGGGCGCTTGTCACCAATATTTGTGAAGATTCTCTTGTGTCCATCAGGCTTGTGGACTTTGGAAACGTTGAAGACTGTGTGGACCCCAAAGCCCTCTGGAACATCCCTTCTGAACTGTTGGCAGTTCCCATGCAAGCCTTTCCATGTTGCCTCTCAGGATTTAATATTTCAGAAGGTGCATGCCCTCAAGAGGGAAATGACTACTTTTATGAAATAGTAACAGAAGATATGTTGGAGATAACAATATTAGAAATCAAAAGGGATGTTTGTGATATCCTTTTAGCCATCGTTGACTTGAAAAGCAAAGGCGAAAGTATTAGTGAGAAAATGAAGAAATATTCTAAGATTGGTATGAGTGACAGTGACCTGCCCTATGAAAAAAATGGCCCAGACATAAAGGGAGCTCTTGGGTCCCCCAGTCCCGATGTTGGACTTCAGAAACCAAGTAGCAAAGCTGGACAAGAGAAAGCACTCTGTGTCGAATCACAGACAGGTAAGCTCTTGGAAAGAATTGACAAAGACTTAAACATCATTGAAACCAAACCAGGTAAATTCTTTGACCCCGAAACTGATAACATTTTTGAAACTTTTGAAAACCCAGGCAAAGAAGAAATTGGCACTGAGTTGCTGGAAGGTAAAGTCGAGTGCCATCTGGGTGACAAAGCAAAGTTTGATGATAAATACCTAATTACAGGATTTAGCACATTGTTACCACATGCCACCGAAACAAAGGAGGTACTGGAACTGAATTCCCTTGAGGTGGTGCTTTCTCCTGATGATGAGTCCAAAGAATTCCTGGAGCTGGAATCCATTGAATTGCAGCATTCCTTAGTCGCAGATGATGAGAAAGAAGAGCTGAGCCTGGTGCCTCTGTCTGTGCCTCTTCCCCAAGGCTGTGACCCAGCGGCCACCCTGCCACCATTGCCAGGGCTACTGCCCCTCAACTGTGAAGCCGAGAAACAGCCTGAACTAGAATTACCTACAGCCCAGCTGTGTCTAGAGGACAAAATAAACTCTTTGTCTTTAAGAGTTAGTCAGAAAACCCAAGAATCCCTGTGTGCTGACGACACAAGAAGGTCCAGTTGTGCGGAATGCTTTGATGAGGAGCATAGGCTGTGCCAGCACGGAAAGACTTGCTATGCCAAGATGCAGATTGAAATGACTATCTATAAAGAAGAATTTACAGAATATATATCTCTGTTTAGAGATGCCATGTCATCGTTGAACTCTGTGTTTTCTGAAGAAGAACCCAGAAGGAAACACAATCGCGCTTTACCAGATCATGTCTCGGGTATGTGTGTTTTTTTGTTGTTGTTGTTGTTTTTTCCCATTCGCTTTTACTTAACTTAG

Related Sequences

bmy_00012T0 Protein

Length: 2039 aa      View alignments
>bmy_00012T0
MCSTPGLPTPGASLVLRVSFVDVQPEVIPVQLWGLVGERRDEYVRLSREIQEAAAAARGPWALGGTSASPGELCLVQAGLRWHRGRVVSRQAQESRVFLLDEGRTITAGAGSLXPGRSEFFHLPSEVLGCVLAGLVPAGGGGGEPRHWAASAVDFLRNLQGKEMNGRVLDVLLLHRLVLLEVPELSQQMQELGLARQVPDGLFRSLLKRYLSATAAVLGPGAPAVPRIPPKQEQPALDYFYPQLQLGVTEPVVVTQVCHPHRIHCQLRSLSQEIHRLSESMAQIYRGSPGTGDENYTSATWEEREESPDKPGSPCAACGLDGHWYRALLLETFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPCALYGLWDGGRGWSRSQVSDLKALLLGQAVNAKIEFYSSFEHVYYVTLYGEDGINLNCVFGVQSCCLADRFLQSQGIEEEEGGGEEEPETAFQSQSPAEEVDEEISLPALRSIRLKMNAFYDAQVEFVKNPSEFWIRLRKHNGTFSKLMRRMCSFYASASKLDGVVLKPEADDLCCVKWKESGYYRAMVTRLDDKSVDVFFVDRGNSENMDWYDVRMLLPQFRRLPILAVRCTLSDIWPLGKNWSQEAISFFKKTVLHKELVIHVLDKQDSQYVIEILDESRTGEENISKVIAQAGFAKYQEFETKENICMSAHSPGHVSNHFTADNNKISSAKKEVEHKVKREGETTAVPETVNDTTVVTNVSTGLVLQDKEKRVSVYSPLVQNFLDIKPGSSCKEELEVGSTVEVKVSHIENPGYFWCQLTRNIEGFKALMCSIQDHCKNTATPYQGTTPACLAKRTANGKWSRALITGAQSSEHVNVIFVDYGDKETVSVKNIYSISEEFLKVKVQAFRCSLYNLIQPMGHNPFVWDEKAIQAFSEFVHKAWEDNLELKCTIFALASIHVEELFNVVDLLTPFQSACHFLVEQRLARPVKLQKPLEPSVQLHSYYYSAHDMKIGSEESVYITHVDDPWTFYCQLGRNANILEQLSYHITQLSKVLLNLKTSPLVPGTLCLARYTDGNWYRGIIIEKEPNKVFFVDFGNIYVVTNHDLLPIPSDAYDVLLLPMQAIKCSLSDIPDHIPEEVTMQFQETISDKSLKALVVAKDPDGRLIIELYDDSIQINANINEKLGLLGSKGGTRKKESESFLSTTETLEAKKEAVKLSPTEYLSKSIENKSDSMAILGESYKPKMSSACKELKFLCSSMKTNLVTQYQDSVANKNNQVSPLPVEKKLESSSEPPLKATKLEATLPERKIDSCNKGLPLKFSEFPQKTIMPGFKTTVYVSHINDLSDFYVQLTEDEAEINRLSERLNTVRTKPEYYAGPPLQRGDIICAVFPEDNLWYRAVVKEQQPNDLLSVQFIDYGNVSVVHTNTIGKLDLVNALLPGLCIHCSLRGLGAPKILNHKEMMHYFSRRTEEAQVRCEFVQFQDKWEVILADEHGIIAEDMMSRYAFSEKSQIGLSTQIIKGACSKSVNKTDVDTSVFLNWYNPKMKMIRAYATVIDGPEYFWCQFADTEKLQYLEVEVQTAGEQVTAWRSCIPCPHIGDPCIVRYREDGHYYRALVTNICEDSLVSIRLVDFGNVEDCVDPKALWNIPSELLAVPMQAFPCCLSGFNISEGACPQEGNDYFYEIVTEDMLEITILEIKRDVCDILLAIVDLKSKGESISEKMKKYSKIGMSDSDLPYEKNGPDIKGALGSPSPDVGLQKPSSKAGQEKALCVESQTGKLLERIDKDLNIIETKPGKFFDPETDNIFETFENPGKEEIGTELLEGKVECHLGDKAKFDDKYLITGFSTLLPHATETKEVLELNSLEVVLSPDDESKEFLELESIELQHSLVADDEKEELSLVPLSVPLPQGCDPAATLPPLPGLLPLNCEAEKQPELELPTAQLCLEDKINSLSLRVSQKTQESLCADDTRRSSCAECFDEEHRLCQHGKTCYAKMQIEMTIYKEEFTEYISLFRDAMSSLNSVFSEEEPRRKHNRALPDHVSGMCVFLLLLLFFPIRFYLT*