Sequence detailsbmy_00076 (Coding sequence)

Part of scaffold_0 (SequenceType object (1))

For more information consult the page for scaffold_0 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRPH2ENSTTRG00000008111 (Bottlenosed dolphin)

Gene Details

peripherin 2 (retinal degeneration, slow)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007663, Bottlenosed dolphin)

Protein Percentage 97.97%
cDNA percentage 98.06%
Ka/Ks Ratio 0.14341 (Ka = 0.0097, Ks = 0.0673)

Additional orthologs identified in other species via the OPTIC pipeline.

PRPH2 (Cow)   PRPH2 (Human)   Prph2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1041 bp    Location:5018694..5032935   Strand:+
Raw sequence 
>bmy_00076
ATGGCATTGCTGAAAGTCAAATTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGCTCTCCGTGTTGGCTGGTATCATCATCTTCGGCTTAGGGCTCTTCCTAAAGATTGAACTCAGGAAGCGGAGCGATATGATGGACAATTCCGAGAGCCATTTTGTGCCCAATTCCTTGATAGGGATGGGGGTGCTGTCTTGTGTCTTCAATTCTCTGGCGGGCAAGATCTGCTATGACGCCTTGGACCCTGCCAAGTATGCCAAGTGGAAGCCCTGGCTGAAGCCATACCTGGCCGTGTGTGTCCTCTTCAACATTGTCCTCTTCCTGGTGGCCCTCTGCTGCTTCCTCCTGAGGGGCTCCCTGGAGAGCACGCTGGCCCACGGGCTCAAGAATGGCATGAAGTTCTACCGGGACACAGACACCCCAGGCCGGTGTTTCATGAAGAAGACCATCGACATGCTGCAAATTGAGTTCAAGTGCTGTGGCAACAACGGCTTTCGGGACTGGTTTGAGATTCAGTGGATCAGCAACCGCTATCTGGACTTTTCCTCCAAAGAAGTCAAAGATCGTATCAAGAGCAACGTGGATGGGCGGTACCTGGTGGATGGAGTCCCCTTCAGCTGCTGCAACCCCAGCTCGCCACGGCCCTGTATCCAGTACCAGCTCACCAACAACTCTGCACACTACAGCTATGACCACCAGACGGAGGAGCTCAACCTGTGGGTGCGCGGCTGCAGGGTCGCCCTGCTGAGCTACTACAGCAACCTCCTGAATTCCGTGGGCGCTGTGACGCTCCTCGTCTGGCTTTTTGAGGTGACCATCACCGTCGGGCTGCGCTACTTGCACACGGCGCTGGAAGGCGTGGCCAACCCCGAAGACCCCGAGTGCGAGAGTGAGGGCTGGCTTCTGGAGAAGAGCATTCCAGAGACCTGGAAGGCCTTTCTGGAGAGCGTGAAGAAGCTGGGCAAGGGTAACCAGGTGGAAGCCGAGGGTGTGGATGCAGGCCAGGCCCCAGAGGCTGGCTGA

Related Sequences

bmy_00076T0 SequenceType object (3)

Length: 347 aa      
>bmy_00076T0
MALLKVKFDQKKRVKLAQGLWLMNWLSVLAGIIIFGLGLFLKIELRKRSDMMDNSESHFVPNSLIGMGVLSCVFNSLAGKICYDALDPAKYAKWKPWLKPYLAVCVLFNIVLFLVALCCFLLRGSLESTLAHGLKNGMKFYRDTDTPGRCFMKKTIDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVPFSCCNPSSPRPCIQYQLTNNSAHYSYDHQTEELNLWVRGCRVALLSYYSNLLNSVGAVTLLVWLFEVTITVGLRYLHTALEGVANPEDPECESEGWLLEKSIPETWKAFLESVKKLGKGNQVEAEGVDAGQAPEAG*