Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED20 ENSTTRG00000009423 (Bottlenosed dolphin)

Gene Details

mediator complex subunit 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008927, Bottlenosed dolphin)

Protein Percentage 98.58%
cDNA percentage 98.58%
Ka/Ks Ratio 0.15091 (Ka = 0.0064, Ks = 0.0425)

MED20 ENSBTAG00000010100 (Cow)

Gene Details

mediator of RNA polymerase II transcription subunit 20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013323, Cow)

Protein Percentage 99.53%
cDNA percentage 96.7%
Ka/Ks Ratio 0.01288 (Ka = 0.0021, Ks = 0.1619)

MED20  (Minke Whale)

Gene Details

mediator complex subunit 20

External Links

Gene match (Identifier: BACU017992, Minke Whale)

Protein Percentage 95.39%
cDNA percentage 97.08%
Ka/Ks Ratio 0.90062 (Ka = 0.0296, Ks = 0.0329)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 756 bp    Location:5666512..5677766   Strand:+
>bmy_00089
TCCGGAGCGTCTCCCTCTACTGGAGCTTGCATTAGCTGGGCTGCTTCACCTCGTGTGGGTTGCCGGAGAACACTGCATTTCAGTTGTTTGATCCTCCCATCATCCTGGCCCGACACCATGGGAGTGACTTGTGTGTCCCAGATGCCCGTGGCCGAGGGCAAGAGTGTCCAGCAGACCGTGGAGCTCCTCACCCGGAAATTGGAGATGCTTGGAGCAGAGAAGCAAGGAACATTTTGTGTGGACTGTGAGACCTACCACATGGCTGCCTCTACCCTTGGCAGCCAAGGTCAGGCCGGGAAGCTGATGTATGTGATGCACAATTCCGAGTACCCTTTGAGCTGCTTCGCCCTCTTTGAGAATGGCCCTTGCCTTGTTGCCGACACCAACTTTGATGTGCTCATGGTGAAGCTCAAGGGCTTTTTCCAGAGTGCCAAGGCCAGCAAGATTGAGACCCGGGGCACCCGCTACCAGTACTGTGACTTCCTAGTGAAGGTGGGCACGGTTACAATGGGGCCCAGTGCCCGAGGCATCTCCGTGGAGGTGGAGTATGGCCCCTGTGTGGTAGCTAGCGACTGCTGGAGCCTGCTGCTCGAGTTCCTGCAGAGCTTTCTAGGCAGCCACACCCCAGGGGCTCCTGCTGTGTTTGGGAACAGGCACGACGCCGTCTACAGCCCAGCAGACACCATGGTCCAGTACATGGAACTCTTCAACAAGATCCGCAAGCAGCAGCAGGTGCCGGTGGCGGGGATTCGTTAG

Related Sequences

bmy_00089T0 Protein

Length: 252 aa      View alignments
>bmy_00089T0
SGASPSTGACISWAASPRVGCRRTLHFSCLILPSSWPDTMGVTCVSQMPVAEGKSVQQTVELLTRKLEMLGAEKQGTFCVDCETYHMAASTLGSQGQAGKLMYVMHNSEYPLSCFALFENGPCLVADTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVEYGPCVVASDCWSLLLEFLQSFLGSHTPGAPAVFGNRHDAVYSPADTMVQYMELFNKIRKQQQVPVAGIR*